| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is aroK
Identifier: 78222197
GI number: 78222197
Start: 1086692
End: 1087198
Strand: Direct
Name: aroK
Synonym: Gmet_0977
Alternate gene names: 78222197
Gene position: 1086692-1087198 (Clockwise)
Preceding gene: 78222196
Following gene: 78222198
Centisome position: 27.18
GC content: 60.36
Gene sequence:
>507_bases GTGCGCAACGTCATTCTCACCGGCTTCATGGGGACGGGAAAAAGCAGCGTCGGCAGGCTTCTGGCCCATCGGCTCGGCTT CCGCTACTGCGACCTGGATGCGCTCATCGTCGAAGGGGAGGGAGTCTCCATTAACGAGATCTTTGCCCGACATGGGGAAC CCCACTTTCGGGCTCTCGAAACCGAGGCGGTGCGATCCGTGTCCCGGGAAGAACGATGTGTCGTTTCCACCGGCGGCGGA GCGGTTATCTCTCCTGAAAACCGTTGTCTCTTGCGGAAGGCGGGAGTTGTGGTGAACCTGACCGCCACGGTGGAGGAAGT ATGCAGGCGGCTGCGGGAGGAGACGGACCGCCCCCTTCTGAAGGACGATCGTTCGGGCGAGCGGATTGCGGCCATGATGG CGGAACGTGAACAGTTCTACGCGGATGCGGAGTTGAGGATTGACACTACCGGCAAAAGCGTGGAAGATGTGGTCGCTGAA ATCACCGGGTACTTGGAAGGAAGGTAG
Upstream 100 bases:
>100_bases GAGATTGCCAGCGCGTTCCTGGAGAAGTTCGGTGGCGACTCCCTTGCCGAGATACGGCGCAACTACGATGGCTACCTCGA CTATCTCCGCTCCTTCTAGC
Downstream 100 bases:
>100_bases CGTGGAAACGCTGACGGTAGGACTTGGCGACAGAAGCTACACGATTCGGGGAGGAAGCGGAATCCTCCCGGGGATCGGTG CGTTCTGCAGGGAGTTGGGG
Product: shikimate kinase
Products: NA
Alternate protein names: SK
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MRNVILTGFMGTGKSSVGRLLAHRLGFRYCDLDALIVEGEGVSINEIFARHGEPHFRALETEAVRSVSREERCVVSTGGG AVISPENRCLLRKAGVVVNLTATVEEVCRRLREETDRPLLKDDRSGERIAAMMAEREQFYADAELRIDTTGKSVEDVVAE ITGYLEGR
Sequences:
>Translated_168_residues MRNVILTGFMGTGKSSVGRLLAHRLGFRYCDLDALIVEGEGVSINEIFARHGEPHFRALETEAVRSVSREERCVVSTGGG AVISPENRCLLRKAGVVVNLTATVEEVCRRLREETDRPLLKDDRSGERIAAMMAEREQFYADAELRIDTTGKSVEDVVAE ITGYLEGR >Mature_168_residues MRNVILTGFMGTGKSSVGRLLAHRLGFRYCDLDALIVEGEGVSINEIFARHGEPHFRALETEAVRSVSREERCVVSTGGG AVISPENRCLLRKAGVVVNLTATVEEVCRRLREETDRPLLKDDRSGERIAAMMAEREQFYADAELRIDTTGKSVEDVVAE ITGYLEGR
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family
Homologues:
Organism=Escherichia coli, GI87082255, Length=167, Percent_Identity=35.3293413173653, Blast_Score=91, Evalue=4e-20, Organism=Escherichia coli, GI1786587, Length=168, Percent_Identity=32.7380952380952, Blast_Score=76, Evalue=1e-15,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): AROK_GEOMG (Q39X05)
Other databases:
- EMBL: CP000148 - RefSeq: YP_383944.1 - ProteinModelPortal: Q39X05 - SMR: Q39X05 - STRING: Q39X05 - GeneID: 3738218 - GenomeReviews: CP000148_GR - KEGG: gme:Gmet_0977 - NMPDR: fig|269799.3.peg.1052 - eggNOG: COG0703 - HOGENOM: HBG335815 - OMA: VIYLRAN - PhylomeDB: Q39X05 - ProtClustDB: CLSK828692 - BioCyc: GMET269799:GMET_0977-MONOMER - GO: GO:0005737 - HAMAP: MF_00109 - InterPro: IPR000623 - InterPro: IPR023000 - PRINTS: PR01100
Pfam domain/function: PF01202 SKI
EC number: =2.7.1.71
Molecular weight: Translated: 18598; Mature: 18598
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: BINDING 33-33 BINDING 57-57 BINDING 79-79 BINDING 117-117 BINDING 136-136
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNVILTGFMGTGKSSVGRLLAHRLGFRYCDLDALIVEGEGVSINEIFARHGEPHFRALE CCCEEEEEECCCCHHHHHHHHHHHHCCEEECCEEEEEECCCCCHHHHHHHCCCCHHHHHH TEAVRSVSREERCVVSTGGGAVISPENRCLLRKAGVVVNLTATVEEVCRRLREETDRPLL HHHHHHHHHCCCEEEECCCCEEECCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHCCCCC KDDRSGERIAAMMAEREQFYADAELRIDTTGKSVEDVVAEITGYLEGR CCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MRNVILTGFMGTGKSSVGRLLAHRLGFRYCDLDALIVEGEGVSINEIFARHGEPHFRALE CCCEEEEEECCCCHHHHHHHHHHHHCCEEECCEEEEEECCCCCHHHHHHHCCCCHHHHHH TEAVRSVSREERCVVSTGGGAVISPENRCLLRKAGVVVNLTATVEEVCRRLREETDRPLL HHHHHHHHHCCCEEEECCCCEEECCCCCEEEEECCEEEEEHHHHHHHHHHHHHHHCCCCC KDDRSGERIAAMMAEREQFYADAELRIDTTGKSVEDVVAEITGYLEGR CCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA