| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is hldE
Identifier: 78222142
GI number: 78222142
Start: 1016630
End: 1018102
Strand: Direct
Name: hldE
Synonym: Gmet_0922
Alternate gene names: 78222142
Gene position: 1016630-1018102 (Clockwise)
Preceding gene: 78222141
Following gene: 78222143
Centisome position: 25.43
GC content: 64.49
Gene sequence:
>1473_bases ATGGAACGCAAAAACGTCGAATCGCTCTTCGCCCATGCCCGGGATATCAACGCCCTTGTCATCGGCGACCTGATGCTTGA CGAGTACCTCTGGGGAAGGGCCGAGCGCATATCCCCCGAGGCCCCGGTGCAGGTGCTCGACGTGACCCGGGAGGAAGTCC GCATCGGAGGCGCCGGCAACGTGGCCAACAACCTGGTGGCCCTGGGGTGCCGGGTGAGCGTCGCCAGTGTCGTGGGGGGA GACGAGAACGGCACGATCCTTCTCCATGCATTCTCCGGCAAGGGGGTCGACGTGTCGGGGGTTTTTGAGGACCCGCAGCG GACCACAAGCCGCAAGACCCGCGTGGTGGCGGCCAACCAGCAGATCGTCCGGATCGACCGGGAGTCCCGCGATCCCATCG GGGCCGGTTACGAGGAGAAGATCGTTGGTTTCCTCCGGGAGCAGGGAAGCCGGTTCAATGTGATCCTCATCTCCGATTAC CTGAAGGGGGTACTCACCCCGACGCTTCTGGCCGCGGTGATCGCCGTTGCCCGGGAGCGGAAGATACCGGTGGTGGTGGA TCCCAAGGGGAACGATTACACCAAGTACCGGGGCGCCACGCTCCTCACCCCGAACCGCAAGGAGGCCGAGGCAGCGTCGG GGATCGCCATTCGCGACGAGGCGAGCCTTTGCAGGGCCGGCGAGCGGCTTCTGGCAACGGCCGACCTCACGGCCCTCGTC ATTACCCGAAGCGAGGAGGGGATGTCTCTCTTTCTGCGCGACGGCGGCGTGGTCCACATTCCCACCTTCGCCCGGGAGGT GTTCGACGTGACCGGCGCCGGCGACACGGTGCTGGCAATACTGGGGCTGGCCCTTGCCTGCGGGGTCGGATTCGCCGATG CGGCAGGGCTCGCCAATGTGGCGGCGGGGATAGCGGTGGGGAAGGTGGGAACCTCCACGGTGTCGCCCGCCGAGGTTATC GGCTCCATGGGGTTCCAGCACTCCGACAGCGATGCCAAGATCAAGAACCTGGACGGCCTGGCCGGGATCATCGAAGCGGA AAAGGCGAGGGGGAAGAAGATCGTCTTCACCAACGGTTGCTTCGACCTCCTCCACGTGGGGCACGTAAAGTATCTCCAGA AGGCAAAAAGCTATGGCGACGTTCTGGTGCTGGGGCTCAACAGTGATGCCTCGGTCCGCCGGCTCAAGGGGGAGAAGCGT CCCCTCATCGACGAGGCCGAGCGGGCCCACATCCTGGCGGCCCTCGACTGCATCGACTACGTGGTTATTTTCGACGAGGA CACCCCGCTGCGCCTCATCGAAACCCTGAAGCCGGCGGTCCTCGTCAAGGGGGGAGACTATACGCCGGAAGGGGTCGTGG GGAAGGATGTGGTGGAGTCCTACGGCGGCAGGGTCGAGCTCGTGACCTTCGTGGATGGCCGCTCCACCACGAACATCATC GATAAGATTCTGAGGGCCTATGGTGAGGAGTGA
Upstream 100 bases:
>100_bases CGGCCACCACGAGATCATGCTTCCGCTTCTGGCCGCGGCGATCTTGGACCGGTTGAACTGAACGAGGGGCGCCCTGAGGG CGCCCTTGGAGAGAGGACGC
Downstream 100 bases:
>100_bases GGAGGGCCGCGCGGCCGTCTTTCTTGACCGGGACGGCACCATCAACGTGGAGAAGGAGTACCTCCACCGGGCCGAGGAGT TCGAGTTCGTCCCCGGGGCG
Product: D-beta-D-heptose 1-phosphate adenylyltransferase/D-alpha,beta-D-heptose 7-phosphate 1-kinase
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MERKNVESLFAHARDINALVIGDLMLDEYLWGRAERISPEAPVQVLDVTREEVRIGGAGNVANNLVALGCRVSVASVVGG DENGTILLHAFSGKGVDVSGVFEDPQRTTSRKTRVVAANQQIVRIDRESRDPIGAGYEEKIVGFLREQGSRFNVILISDY LKGVLTPTLLAAVIAVARERKIPVVVDPKGNDYTKYRGATLLTPNRKEAEAASGIAIRDEASLCRAGERLLATADLTALV ITRSEEGMSLFLRDGGVVHIPTFAREVFDVTGAGDTVLAILGLALACGVGFADAAGLANVAAGIAVGKVGTSTVSPAEVI GSMGFQHSDSDAKIKNLDGLAGIIEAEKARGKKIVFTNGCFDLLHVGHVKYLQKAKSYGDVLVLGLNSDASVRRLKGEKR PLIDEAERAHILAALDCIDYVVIFDEDTPLRLIETLKPAVLVKGGDYTPEGVVGKDVVESYGGRVELVTFVDGRSTTNII DKILRAYGEE
Sequences:
>Translated_490_residues MERKNVESLFAHARDINALVIGDLMLDEYLWGRAERISPEAPVQVLDVTREEVRIGGAGNVANNLVALGCRVSVASVVGG DENGTILLHAFSGKGVDVSGVFEDPQRTTSRKTRVVAANQQIVRIDRESRDPIGAGYEEKIVGFLREQGSRFNVILISDY LKGVLTPTLLAAVIAVARERKIPVVVDPKGNDYTKYRGATLLTPNRKEAEAASGIAIRDEASLCRAGERLLATADLTALV ITRSEEGMSLFLRDGGVVHIPTFAREVFDVTGAGDTVLAILGLALACGVGFADAAGLANVAAGIAVGKVGTSTVSPAEVI GSMGFQHSDSDAKIKNLDGLAGIIEAEKARGKKIVFTNGCFDLLHVGHVKYLQKAKSYGDVLVLGLNSDASVRRLKGEKR PLIDEAERAHILAALDCIDYVVIFDEDTPLRLIETLKPAVLVKGGDYTPEGVVGKDVVESYGGRVELVTFVDGRSTTNII DKILRAYGEE >Mature_490_residues MERKNVESLFAHARDINALVIGDLMLDEYLWGRAERISPEAPVQVLDVTREEVRIGGAGNVANNLVALGCRVSVASVVGG DENGTILLHAFSGKGVDVSGVFEDPQRTTSRKTRVVAANQQIVRIDRESRDPIGAGYEEKIVGFLREQGSRFNVILISDY LKGVLTPTLLAAVIAVARERKIPVVVDPKGNDYTKYRGATLLTPNRKEAEAASGIAIRDEASLCRAGERLLATADLTALV ITRSEEGMSLFLRDGGVVHIPTFAREVFDVTGAGDTVLAILGLALACGVGFADAAGLANVAAGIAVGKVGTSTVSPAEVI GSMGFQHSDSDAKIKNLDGLAGIIEAEKARGKKIVFTNGCFDLLHVGHVKYLQKAKSYGDVLVLGLNSDASVRRLKGEKR PLIDEAERAHILAALDCIDYVVIFDEDTPLRLIETLKPAVLVKGGDYTPEGVVGKDVVESYGGRVELVTFVDGRSTTNII DKILRAYGEE
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family
Homologues:
Organism=Escherichia coli, GI1789432, Length=469, Percent_Identity=43.4968017057569, Blast_Score=359, Evalue=1e-100, Organism=Drosophila melanogaster, GI19921220, Length=75, Percent_Identity=45.3333333333333, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI45550973, Length=75, Percent_Identity=45.3333333333333, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI45550974, Length=75, Percent_Identity=45.3333333333333, Blast_Score=67, Evalue=4e-11, Organism=Drosophila melanogaster, GI45550975, Length=75, Percent_Identity=45.3333333333333, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HLDE_GEOMG (Q39X60)
Other databases:
- EMBL: CP000148 - RefSeq: YP_383889.1 - HSSP: O05155 - ProteinModelPortal: Q39X60 - SMR: Q39X60 - STRING: Q39X60 - GeneID: 3740078 - GenomeReviews: CP000148_GR - KEGG: gme:Gmet_0922 - NMPDR: fig|269799.3.peg.997 - eggNOG: COG2870 - HOGENOM: HBG545535 - OMA: LTPNRKE - PhylomeDB: Q39X60 - ProtClustDB: CLSK828725 - BioCyc: GMET269799:GMET_0922-MONOMER - HAMAP: MF_01603 - InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - TIGRFAMs: TIGR00125 - TIGRFAMs: TIGR02198 - TIGRFAMs: TIGR02199
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB
EC number: 2.7.-.-
Molecular weight: Translated: 52332; Mature: 52332
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: PS00583 PFKB_KINASES_1; PS00584 PFKB_KINASES_2
Important sites: ACT_SITE 275-275
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKNVESLFAHARDINALVIGDLMLDEYLWGRAERISPEAPVQVLDVTREEVRIGGAGN CCCCHHHHHHHHHHCCCEEEEHHHHHHHHHCCCHHCCCCCCCCHHEECCHHHEEECCCCC VANNLVALGCRVSVASVVGGDENGTILLHAFSGKGVDVSGVFEDPQRTTSRKTRVVAANQ HHHCCEEEECCEEEEHHCCCCCCCEEEEEEECCCCCEEECCCCCCHHHHCCCEEEEECCC QIVRIDRESRDPIGAGYEEKIVGFLREQGSRFNVILISDYLKGVLTPTLLAAVIAVARER EEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC KIPVVVDPKGNDYTKYRGATLLTPNRKEAEAASGIAIRDEASLCRAGERLLATADLTALV CCCEEECCCCCCCCEECCEEEECCCCCHHHHHCCEEEECCHHHHHCCCCEEEECCEEEEE ITRSEEGMSLFLRDGGVVHIPTFAREVFDVTGAGDTVLAILGLALACGVGFADAAGLANV EEECCCCCEEEEECCCEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH AAGIAVGKVGTSTVSPAEVIGSMGFQHSDSDAKIKNLDGLAGIIEAEKARGKKIVFTNGC HHHHEECCCCCCCCCHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHCCCCEEEEECCC FDLLHVGHVKYLQKAKSYGDVLVLGLNSDASVRRLKGEKRPLIDEAERAHILAALDCIDY HHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHEEE VVIFDEDTPLRLIETLKPAVLVKGGDYTPEGVVGKDVVESYGGRVELVTFVDGRSTTNII EEEECCCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCEEEEEEEECCCCHHHHH DKILRAYGEE HHHHHHHCCC >Mature Secondary Structure MERKNVESLFAHARDINALVIGDLMLDEYLWGRAERISPEAPVQVLDVTREEVRIGGAGN CCCCHHHHHHHHHHCCCEEEEHHHHHHHHHCCCHHCCCCCCCCHHEECCHHHEEECCCCC VANNLVALGCRVSVASVVGGDENGTILLHAFSGKGVDVSGVFEDPQRTTSRKTRVVAANQ HHHCCEEEECCEEEEHHCCCCCCCEEEEEEECCCCCEEECCCCCCHHHHCCCEEEEECCC QIVRIDRESRDPIGAGYEEKIVGFLREQGSRFNVILISDYLKGVLTPTLLAAVIAVARER EEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC KIPVVVDPKGNDYTKYRGATLLTPNRKEAEAASGIAIRDEASLCRAGERLLATADLTALV CCCEEECCCCCCCCEECCEEEECCCCCHHHHHCCEEEECCHHHHHCCCCEEEECCEEEEE ITRSEEGMSLFLRDGGVVHIPTFAREVFDVTGAGDTVLAILGLALACGVGFADAAGLANV EEECCCCCEEEEECCCEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH AAGIAVGKVGTSTVSPAEVIGSMGFQHSDSDAKIKNLDGLAGIIEAEKARGKKIVFTNGC HHHHEECCCCCCCCCHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHCCCCEEEEECCC FDLLHVGHVKYLQKAKSYGDVLVLGLNSDASVRRLKGEKRPLIDEAERAHILAALDCIDY HHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHEEE VVIFDEDTPLRLIETLKPAVLVKGGDYTPEGVVGKDVVESYGGRVELVTFVDGRSTTNII EEEECCCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHCCCEEEEEEEECCCCHHHHH DKILRAYGEE HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA