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The map label for this gene is arnC [H]

Identifier: 78222105

GI number: 78222105

Start: 974460

End: 975392

Strand: Reverse

Name: arnC [H]

Synonym: Gmet_0885

Alternate gene names: 78222105

Gene position: 975392-974460 (Counterclockwise)

Preceding gene: 78222106

Following gene: 78222104

Centisome position: 24.4

GC content: 62.06

Gene sequence:

>933_bases
ATGAGCAAGCCCTATATCTCCATCATCATCCCTGTCTACAACGAGGAACCGAACCTCCAGAAACTCCTGGCGCGGCTCTA
CCCGGTCATGACCGCCCTCGGCAAGCCCTTCGAGATCATCTTCACCGACGACGGCTCCCGGGACCGCTCCCTGGAAATCC
TCCGGGAGATGGCCCAGAGCCATCCGGAAGTGAAGGTGATCGAGTTCAACGGCAACTTCGGCCAGCACATGGCAATCATG
GCAGCCTTCGAGATGAGCGCCGGCGAGATCGTCGTCACCCTCGACGCCGACCTCCAGAACCCCCCGGAAGAGATCCCCAA
GCTCGTGGCCGAGATGGAGAAGGGACACGACGTGGTGGGAAGCGTCCGCCAGAAGCGCCAGGACACCTTCTTCCGCCGGG
CCGCGTCGCGGATCGTCAACATCACCACCAACAAGATGACCGGGATGCAGATGAGCGACTACGGCTGCATGCTCCGGGCC
TACAACCGCACCGTCATCGACAACCTGAACCGCTGCCAGGAGATGACCACCTTCATCCCGGCCCTGGCTCAGACCTTCGC
TTCGAACCCGTCGGAGGTGCCGGTCTCCCACGCAGAGCGGGCCGAGGGAGAAAGCAAGTATTCCCTCTACCGCCTCATCC
GCCTCAACTTCGACCTCATGACCGGCTTTTCGGTGGTGCCGCTCCAGCTCTTCGCCCTTCTCGGCATCCTCACCTCGGTG
GCGTCGGTCCTCTTCGCCCTCTTCCTCCTCGTGCGCCGCTTCCTGATCGGCTCCGAAGTGGAAGGGGTCTTCACCCTCTT
CGCCATCCTCTTCTTCTTCGTCGGCATCATCATCTTCGGCATCGGCCTTGTGGGGGAATACGTGGGGAGGATCTACCAGG
AAGTGCGGCGCCGGCCGCGGTATGTGGTCAGGAGGACCTATGGCTTCGAGTAG

Upstream 100 bases:

>100_bases
CATCCTCTCCCTCCCCCTTTTCCCGGCCATGACCATGGACGACGCCCGGGACGTGGTGGCGGCGGTGAAGGATGTCATTG
CCCGGAACAGGAAGTAGGCC

Downstream 100 bases:

>100_bases
TGGGAGAGGAACGAGAGTGGTCGTCTGCGCCTACCACAACGTCGGCTTCCGCTGTCTGGAGGAACTGCTGAAGCAGGGAG
CCGACGTGCGGCTGGTCTTC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSKPYISIIIPVYNEEPNLQKLLARLYPVMTALGKPFEIIFTDDGSRDRSLEILREMAQSHPEVKVIEFNGNFGQHMAIM
AAFEMSAGEIVVTLDADLQNPPEEIPKLVAEMEKGHDVVGSVRQKRQDTFFRRAASRIVNITTNKMTGMQMSDYGCMLRA
YNRTVIDNLNRCQEMTTFIPALAQTFASNPSEVPVSHAERAEGESKYSLYRLIRLNFDLMTGFSVVPLQLFALLGILTSV
ASVLFALFLLVRRFLIGSEVEGVFTLFAILFFFVGIIIFGIGLVGEYVGRIYQEVRRRPRYVVRRTYGFE

Sequences:

>Translated_310_residues
MSKPYISIIIPVYNEEPNLQKLLARLYPVMTALGKPFEIIFTDDGSRDRSLEILREMAQSHPEVKVIEFNGNFGQHMAIM
AAFEMSAGEIVVTLDADLQNPPEEIPKLVAEMEKGHDVVGSVRQKRQDTFFRRAASRIVNITTNKMTGMQMSDYGCMLRA
YNRTVIDNLNRCQEMTTFIPALAQTFASNPSEVPVSHAERAEGESKYSLYRLIRLNFDLMTGFSVVPLQLFALLGILTSV
ASVLFALFLLVRRFLIGSEVEGVFTLFAILFFFVGIIIFGIGLVGEYVGRIYQEVRRRPRYVVRRTYGFE
>Mature_309_residues
SKPYISIIIPVYNEEPNLQKLLARLYPVMTALGKPFEIIFTDDGSRDRSLEILREMAQSHPEVKVIEFNGNFGQHMAIMA
AFEMSAGEIVVTLDADLQNPPEEIPKLVAEMEKGHDVVGSVRQKRQDTFFRRAASRIVNITTNKMTGMQMSDYGCMLRAY
NRTVIDNLNRCQEMTTFIPALAQTFASNPSEVPVSHAERAEGESKYSLYRLIRLNFDLMTGFSVVPLQLFALLGILTSVA
SVLFALFLLVRRFLIGSEVEGVFTLFAILFFFVGIIIFGIGLVGEYVGRIYQEVRRRPRYVVRRTYGFE

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=237, Percent_Identity=25.3164556962025, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1788588, Length=303, Percent_Identity=49.5049504950495, Blast_Score=317, Evalue=9e-88,
Organism=Escherichia coli, GI1788692, Length=301, Percent_Identity=28.2392026578073, Blast_Score=166, Evalue=3e-42,
Organism=Caenorhabditis elegans, GI71999402, Length=218, Percent_Identity=26.1467889908257, Blast_Score=68, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6325441, Length=219, Percent_Identity=29.2237442922374, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24585265, Length=235, Percent_Identity=25.1063829787234, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 35178; Mature: 35046

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPYISIIIPVYNEEPNLQKLLARLYPVMTALGKPFEIIFTDDGSRDRSLEILREMAQS
CCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHC
HPEVKVIEFNGNFGQHMAIMAAFEMSAGEIVVTLDADLQNPPEEIPKLVAEMEKGHDVVG
CCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHH
SVRQKRQDTFFRRAASRIVNITTNKMTGMQMSDYGCMLRAYNRTVIDNLNRCQEMTTFIP
HHHHHHHHHHHHHHHHHHEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAQTFASNPSEVPVSHAERAEGESKYSLYRLIRLNFDLMTGFSVVPLQLFALLGILTSV
HHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ASVLFALFLLVRRFLIGSEVEGVFTLFAILFFFVGIIIFGIGLVGEYVGRIYQEVRRRPR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
YVVRRTYGFE
HHHHHHCCCC
>Mature Secondary Structure 
SKPYISIIIPVYNEEPNLQKLLARLYPVMTALGKPFEIIFTDDGSRDRSLEILREMAQS
CCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHC
HPEVKVIEFNGNFGQHMAIMAAFEMSAGEIVVTLDADLQNPPEEIPKLVAEMEKGHDVVG
CCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHH
SVRQKRQDTFFRRAASRIVNITTNKMTGMQMSDYGCMLRAYNRTVIDNLNRCQEMTTFIP
HHHHHHHHHHHHHHHHHHEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAQTFASNPSEVPVSHAERAEGESKYSLYRLIRLNFDLMTGFSVVPLQLFALLGILTSV
HHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
ASVLFALFLLVRRFLIGSEVEGVFTLFAILFFFVGIIIFGIGLVGEYVGRIYQEVRRRPR
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
YVVRRTYGFE
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA