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The map label for this gene is ydfM [H]

Identifier: 78222078

GI number: 78222078

Start: 945256

End: 946155

Strand: Direct

Name: ydfM [H]

Synonym: Gmet_0858

Alternate gene names: 78222078

Gene position: 945256-946155 (Clockwise)

Preceding gene: 78222077

Following gene: 78222079

Centisome position: 23.65

GC content: 54.89

Gene sequence:

>900_bases
ATGCTGAGGGAAGAGCGTTTCAATAAAGCTGACCGTATTATCGCGGTCGGATTCTGGGCCAACGCAGGGCTCATGATCAT
GAAACTCCTGGCCGGCTATTTCGGGAAATCGGAAGCGGTGTTTGCCGATGGCCTGGAGAGCGCCTGTGATTTCATTGCGA
TTCTCTCCACGATGATTGCGCTTAAGGTCGGACGTCAACCATTCGACCCGAAACATCCCTACGGGCACGGCAAAGCGGAG
AGCATCGCGGCAGTCCTTGTTTCGCTGGTCATCTTTTCAACGGGCATAGGGATTCTTGTTAAGGCCGTCCACACCATTAT
GGACCGCACCTATCAGACCCCTGATCTGATTGCGGTGCTTGCTGCTCTTGTCACCATTGCGGTCAAGGAATGGTTGTACC
GCTACACGGTATCGACCGGAAAGCATCTTGAGAGCCCCGCACTGGCGGCGGTTGCCAAGGATCATCGCAAGGATGCTGTG
ACGTCCATCGCCACCCTCGTTGGCGTCTTCGGCGCCTACCTGGGGGCCGGCGTCATGGATCCCCTGGCCGCCGGACTCAC
GGCGTTCTTCATTTTTCACATCGGCTATGAAACATGCATGGGAGCCATCCATGACCTCATGGATGGCCTCCCCTCCGGTG
ATCTTATCCAATCGATCTCCGAAGTGGCCGAAGCGGTTGACGGAGTGGAGCACGTCCATGAAATCCGGGGGAGGAGATCG
GGCCAGTACATCATTATTGATCTCAAACTCGATATGGACCCAGAGATGACCGTCAAGCGCTCCCATGACATCGCCACAAC
GGTTAAGCGGCTTATTTTCGAGCAATTCCCCAATGTGGGAGACGTGATGATCCACATTAATCCCCATGACGAAGAACATG
AGGATCTGATCAGGCTGTAA

Upstream 100 bases:

>100_bases
TGGATATCGTTTTTACGCTCGGCTGGAACGAGTGGAACGGCCGCAAAACCCTGCAACTGAGCCTCAAGGACATCAGGGAG
TCCGGTCAGGTGCTTGAGCC

Downstream 100 bases:

>100_bases
CGGTTGCAATTGACATTGTCATGCTATTATGGATATTGATGACAACTTAATTTACGTGCCGTAGTTGTCAATGTCGCTAT
CTGACTCATGCCAGTGACGG

Product: cation efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MLREERFNKADRIIAVGFWANAGLMIMKLLAGYFGKSEAVFADGLESACDFIAILSTMIALKVGRQPFDPKHPYGHGKAE
SIAAVLVSLVIFSTGIGILVKAVHTIMDRTYQTPDLIAVLAALVTIAVKEWLYRYTVSTGKHLESPALAAVAKDHRKDAV
TSIATLVGVFGAYLGAGVMDPLAAGLTAFFIFHIGYETCMGAIHDLMDGLPSGDLIQSISEVAEAVDGVEHVHEIRGRRS
GQYIIIDLKLDMDPEMTVKRSHDIATTVKRLIFEQFPNVGDVMIHINPHDEEHEDLIRL

Sequences:

>Translated_299_residues
MLREERFNKADRIIAVGFWANAGLMIMKLLAGYFGKSEAVFADGLESACDFIAILSTMIALKVGRQPFDPKHPYGHGKAE
SIAAVLVSLVIFSTGIGILVKAVHTIMDRTYQTPDLIAVLAALVTIAVKEWLYRYTVSTGKHLESPALAAVAKDHRKDAV
TSIATLVGVFGAYLGAGVMDPLAAGLTAFFIFHIGYETCMGAIHDLMDGLPSGDLIQSISEVAEAVDGVEHVHEIRGRRS
GQYIIIDLKLDMDPEMTVKRSHDIATTVKRLIFEQFPNVGDVMIHINPHDEEHEDLIRL
>Mature_299_residues
MLREERFNKADRIIAVGFWANAGLMIMKLLAGYFGKSEAVFADGLESACDFIAILSTMIALKVGRQPFDPKHPYGHGKAE
SIAAVLVSLVIFSTGIGILVKAVHTIMDRTYQTPDLIAVLAALVTIAVKEWLYRYTVSTGKHLESPALAAVAKDHRKDAV
TSIATLVGVFGAYLGAGVMDPLAAGLTAFFIFHIGYETCMGAIHDLMDGLPSGDLIQSISEVAEAVDGVEHVHEIRGRRS
GQYIIIDLKLDMDPEMTVKRSHDIATTVKRLIFEQFPNVGDVMIHINPHDEEHEDLIRL

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=276, Percent_Identity=25.3623188405797, Blast_Score=102, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI72000060, Length=309, Percent_Identity=22.3300970873786, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI72000062, Length=309, Percent_Identity=22.3300970873786, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17553664, Length=318, Percent_Identity=23.5849056603774, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115533508, Length=284, Percent_Identity=23.2394366197183, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI115533506, Length=284, Percent_Identity=23.2394366197183, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323831, Length=233, Percent_Identity=30.9012875536481, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6325032, Length=239, Percent_Identity=24.2677824267782, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 32697; Mature: 32697

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLREERFNKADRIIAVGFWANAGLMIMKLLAGYFGKSEAVFADGLESACDFIAILSTMIA
CCCHHHCCCCCCEEEEEEHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LKVGRQPFDPKHPYGHGKAESIAAVLVSLVIFSTGIGILVKAVHTIMDRTYQTPDLIAVL
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AALVTIAVKEWLYRYTVSTGKHLESPALAAVAKDHRKDAVTSIATLVGVFGAYLGAGVMD
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
PLAAGLTAFFIFHIGYETCMGAIHDLMDGLPSGDLIQSISEVAEAVDGVEHVHEIRGRRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
GQYIIIDLKLDMDPEMTVKRSHDIATTVKRLIFEQFPNVGDVMIHINPHDEEHEDLIRL
CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCC
>Mature Secondary Structure
MLREERFNKADRIIAVGFWANAGLMIMKLLAGYFGKSEAVFADGLESACDFIAILSTMIA
CCCHHHCCCCCCEEEEEEHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
LKVGRQPFDPKHPYGHGKAESIAAVLVSLVIFSTGIGILVKAVHTIMDRTYQTPDLIAVL
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AALVTIAVKEWLYRYTVSTGKHLESPALAAVAKDHRKDAVTSIATLVGVFGAYLGAGVMD
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
PLAAGLTAFFIFHIGYETCMGAIHDLMDGLPSGDLIQSISEVAEAVDGVEHVHEIRGRRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
GQYIIIDLKLDMDPEMTVKRSHDIATTVKRLIFEQFPNVGDVMIHINPHDEEHEDLIRL
CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]