| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222070
Identifier: 78222070
GI number: 78222070
Start: 936592
End: 937722
Strand: Direct
Name: 78222070
Synonym: Gmet_0850
Alternate gene names: NA
Gene position: 936592-937722 (Clockwise)
Preceding gene: 78222064
Following gene: 78222071
Centisome position: 23.43
GC content: 59.95
Gene sequence:
>1131_bases GTGAGGTTTCTGTTTGCCATAGCGGCTCTGCTCCTGCTCCTTGCTGGGGATGGTTCCGCAGCGACCCTCCCCCGGCAGGA GGCCGTTCGGGTTGCCATTATCAAGGGAGTCGACAGCGTAAGGATCGACGGTGACGGCGTGCTTGCCACCGATGGGAGGG GCGAACCGCTACGTCTGACTCTCCCCGCGCAGGTCAGGCGTGTCGGAGGCTCTCTCTCCGTGGGGGGGCAGACGGTTGCC CGACTCACGGTTACTTCTCCCCTGGTCATACAGGTTAACGGCAAGCGTTACCGCGGCACCATAGAGGTTTCTCCCGCCGA CAGAGGGATCCTCGTGGTGAATGACCTCCCGCTTGAGGATTATCTGGTTGGTCTCATCAATTGCGAAATCTCATCCCAGT GGCCCATCGAGGCGGTGAAGGCCCAGGCGGTGGTGGCACGCACCTATGCCTCATACCAGAAGCGGGCACGTGCTAACGCC CCGTACCACCTGGAGTCATCGGTGCTTGACCAGGTCTATGACGGGTGCGAGATCGAGGATAGCCGTGCTGCGCGGGGGGT ACGGGAAACTGCCGGGGAGATTCTCACCTACGGAGGCCAACCGATCCAGGCATTCTACCATTCCAACTGTGGCGGCCGAA CCGAAGTCGCCGAGAACGTCTGGGGGGTCCGGCTACCCTATCTCAAGAGTGTAGATTGCGCTTACTGTTCCACGAACCCC TCTATCCGTTGGGAGTACGCCATCTCGTTGAAGAAGCTCGAGTCGCTTCTCAGAGGATCGGGAACCCATGTTTCAGGCCT TCGGGATGTCAGGGAAGGGAAGCGAAACGAGAGTGGCAGGCTCATTGACCTTGCTCTTGTTTCAGGCGGGGGGACAACGA CCGTGACGGCGGTGAACTTCCGCAAGATCGTCGGCTATACCGCCATCAAGAGCACCAATTTTACGGTTAGAGTCACCAGC GACTTGGTTCGCTTTACCGGTACCGGTTACGGGCATGGAGTCGGCCTCTGTCAGTGGGGCGCGAAACAACGGGCATCCGA TGGTTTCACCTACCGGGAGATTCTTGCCTATTACTATCCCGGTGCGCTCCTGAGCAAGCTCCCGGTGGGGCAGGGTGTCG ATGCGCGTTGA
Upstream 100 bases:
>100_bases GCAATTTGGTTGCCAAGTATACTATGCTCGAAGGGGGCTTTTACCCTTCCTTTCTTTTTTGTGTCGTTGAAAGTCAGTGT CGGAAGGTCTCTCTGTCACC
Downstream 100 bases:
>100_bases CGATTTCGACTATGAACTGCCTCCGGAGTTGATAGCCCAGGAACCCTTGGACCGACGTGACGCCACCCGACTCATGACCG TCGACCGGTTGAAGGGAGAG
Product: stage II sporulation-related protein
Products: NA
Alternate protein names: H-34 [H]
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MRFLFAIAALLLLLAGDGSAATLPRQEAVRVAIIKGVDSVRIDGDGVLATDGRGEPLRLTLPAQVRRVGGSLSVGGQTVA RLTVTSPLVIQVNGKRYRGTIEVSPADRGILVVNDLPLEDYLVGLINCEISSQWPIEAVKAQAVVARTYASYQKRARANA PYHLESSVLDQVYDGCEIEDSRAARGVRETAGEILTYGGQPIQAFYHSNCGGRTEVAENVWGVRLPYLKSVDCAYCSTNP SIRWEYAISLKKLESLLRGSGTHVSGLRDVREGKRNESGRLIDLALVSGGGTTTVTAVNFRKIVGYTAIKSTNFTVRVTS DLVRFTGTGYGHGVGLCQWGAKQRASDGFTYREILAYYYPGALLSKLPVGQGVDAR
Sequences:
>Translated_376_residues MRFLFAIAALLLLLAGDGSAATLPRQEAVRVAIIKGVDSVRIDGDGVLATDGRGEPLRLTLPAQVRRVGGSLSVGGQTVA RLTVTSPLVIQVNGKRYRGTIEVSPADRGILVVNDLPLEDYLVGLINCEISSQWPIEAVKAQAVVARTYASYQKRARANA PYHLESSVLDQVYDGCEIEDSRAARGVRETAGEILTYGGQPIQAFYHSNCGGRTEVAENVWGVRLPYLKSVDCAYCSTNP SIRWEYAISLKKLESLLRGSGTHVSGLRDVREGKRNESGRLIDLALVSGGGTTTVTAVNFRKIVGYTAIKSTNFTVRVTS DLVRFTGTGYGHGVGLCQWGAKQRASDGFTYREILAYYYPGALLSKLPVGQGVDAR >Mature_376_residues MRFLFAIAALLLLLAGDGSAATLPRQEAVRVAIIKGVDSVRIDGDGVLATDGRGEPLRLTLPAQVRRVGGSLSVGGQTVA RLTVTSPLVIQVNGKRYRGTIEVSPADRGILVVNDLPLEDYLVGLINCEISSQWPIEAVKAQAVVARTYASYQKRARANA PYHLESSVLDQVYDGCEIEDSRAARGVRETAGEILTYGGQPIQAFYHSNCGGRTEVAENVWGVRLPYLKSVDCAYCSTNP SIRWEYAISLKKLESLLRGSGTHVSGLRDVREGKRNESGRLIDLALVSGGGTTTVTAVNFRKIVGYTAIKSTNFTVRVTS DLVRFTGTGYGHGVGLCQWGAKQRASDGFTYREILAYYYPGALLSKLPVGQGVDAR
Specific function: Might be involved in sporulation [H]
COG id: COG2385
COG function: function code D; Sporulation protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013486 - InterPro: IPR013693 [H]
Pfam domain/function: PF08486 SpoIID [H]
EC number: NA
Molecular weight: Translated: 40544; Mature: 40544
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFLFAIAALLLLLAGDGSAATLPRQEAVRVAIIKGVDSVRIDGDGVLATDGRGEPLRLT CHHHHHHHHHHHHCCCCCCCCCCCHHHCEEEEEEECCCEEEECCCCEEEECCCCCCEEEE LPAQVRRVGGSLSVGGQTVARLTVTSPLVIQVNGKRYRGTIEVSPADRGILVVNDLPLED CCHHHHHCCCCEECCCCEEEEEEECCCEEEEECCCEEEEEEEECCCCCCEEEEECCCHHH YLVGLINCEISSQWPIEAVKAQAVVARTYASYQKRARANAPYHLESSVLDQVYDGCEIED HEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCH SRAARGVRETAGEILTYGGQPIQAFYHSNCGGRTEVAENVWGVRLPYLKSVDCAYCSTNP HHHHCHHHHHHHHHEECCCCEEEHEEECCCCCCHHHHHCCCCEECCCCCCCCEEEECCCC SIRWEYAISLKKLESLLRGSGTHVSGLRDVREGKRNESGRLIDLALVSGGGTTTVTAVNF CEEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEH RKIVGYTAIKSTNFTVRVTSDLVRFTGTGYGHGVGLCQWGAKQRASDGFTYREILAYYYP HHHHEEEEEECCCEEEEEECHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCC GALLSKLPVGQGVDAR CHHHHHCCCCCCCCCC >Mature Secondary Structure MRFLFAIAALLLLLAGDGSAATLPRQEAVRVAIIKGVDSVRIDGDGVLATDGRGEPLRLT CHHHHHHHHHHHHCCCCCCCCCCCHHHCEEEEEEECCCEEEECCCCEEEECCCCCCEEEE LPAQVRRVGGSLSVGGQTVARLTVTSPLVIQVNGKRYRGTIEVSPADRGILVVNDLPLED CCHHHHHCCCCEECCCCEEEEEEECCCEEEEECCCEEEEEEEECCCCCCEEEEECCCHHH YLVGLINCEISSQWPIEAVKAQAVVARTYASYQKRARANAPYHLESSVLDQVYDGCEIED HEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCH SRAARGVRETAGEILTYGGQPIQAFYHSNCGGRTEVAENVWGVRLPYLKSVDCAYCSTNP HHHHCHHHHHHHHHEECCCCEEEHEEECCCCCCHHHHHCCCCEECCCCCCCCEEEECCCC SIRWEYAISLKKLESLLRGSGTHVSGLRDVREGKRNESGRLIDLALVSGGGTTTVTAVNF CEEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEH RKIVGYTAIKSTNFTVRVTSDLVRFTGTGYGHGVGLCQWGAKQRASDGFTYREILAYYYP HHHHEEEEEECCCEEEEEECHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCC GALLSKLPVGQGVDAR CHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA