| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is iorB [H]
Identifier: 78222057
GI number: 78222057
Start: 921938
End: 924112
Strand: Reverse
Name: iorB [H]
Synonym: Gmet_0837
Alternate gene names: 78222057
Gene position: 924112-921938 (Counterclockwise)
Preceding gene: 78222058
Following gene: 78222056
Centisome position: 23.12
GC content: 66.44
Gene sequence:
>2175_bases ATGAGCGGAATCGTCATCGTGAGCCGCCGTGATTTTCTGAAGGCAGGCATCGTTCTGGGGGGCGGGCTGATCATAGGGGT CCACCTGCCGGGAGGAACCGCCGCCGGCATGGAGCCCCCCCGCGAGACCTTCGCTCCCGACGCCTTCATCCGGATCGGCA CCGACGATTCGGTGACGGTGATCGTCAACAAGTCGGAGATGGGCCAGGGGGTCTATACCGCGCTTCCCATGATCGTTGCC GAGGAACTGGAGGTGGATCCGGCCACCATCCGGGTTGAGGCGGCGCCGGTGACCCCGCCCTACAACCACGCCGAGTGGGG GATCCAGGCGACCGGTGGCAGCACGAGCGTGCGGTCCGAATGGGACCGTCTCGCAAGAGCGGGGGCAACGGCCCGGATGA TGCTCGTGGCTGCCGCCGCCGAAACCTGGAAGGTGAAGCCTGGTCAGTGCCGGGCCGAAAAGGGATTTGTCCTCCATCAG GCCAGCGGCAGGCGCCTCTCCTACGGGAAACTGGCTGAACGGGCCGCCCGGCTGAAGCCCCCGGCGGAGGTGCAGCTGAA GTCACCCAAGGATTACAGCGTCATCGGCCGGCCGGTCAAACGGCTCGACACTCCTGCCAAAGTGGACGGCACCGCACTCT TCGGCCTCGATGTCGCCATACCCGGCATGCTCACCGCCGTGGTGGCGCGGCCGCCGGTCTTCGGCGCCAAGGCCATGAAG ATTCACCATGACAAGGCGGAAAAGGTGCCGGGAGTGAAGAGGGTGATCCCCATCGATGCGGGGGTGGCGGTCATTGCCGA GAGTTTCCCGGCTGCCGTCAAGGGACGGGAGACCCTGGAAATCGAATGGAACGAAGGGCCCCTGGCAGGCCTCGACAGCG GCCGCCAGCGGGATGAGTACGCGGAGATGGCAAAACGCCCCGGAGCCGTGGCTGCCCGCCGGGGAGACCCGGACGCCGCG CTGAAGCAAGCAGTAAAGCGGATCGACGCCGTCTACGAGCTCCCGTACCTGGCCCACGCCCCTCTGGAGCCCTTGAACTG CGTGGCGAGGGTGGAGCCCGGCCGCTGCGACATCTGGACAGGCACCCAGATGCAGACCGGGGACCGGAACGCGGCGGCAA AGATCACTGGCCTTCCCCCCGAGAAGATAACCCTCCGCACCATGTTCCTGGGGGGCGGGTTCGGGAGGCGGGCAGTCCCC GATTCCCACTTCGTGCGGGAAGCGGTGCAGGCATCCAAGGCCATGGGCAAGCCGGTGAAGGTGGTCTGGACCCGGGATGA CGACATCCACGGCGGCTGGTACCGCCCCACTTTCCATAACGAGCTCTCCGCCGGCCTTGACGCCGCCGGAATGCCCGTTG CCTGGAAACACCGGATCGTCTGCCAGTCCATCGCCATCGGCACCCCCTTCGAGAAGGGAATGGTGAAAAACGGCGTCGAC GACACCTCCGTGGAGGGGGCCGCCGATTCACCCTACGCGGTGCCAAACTTCCTCTGCGACTACCACATGGCGCCGGCCGG AGTGCCGGTCCTCTGGTGGCGGTCGGTGGGGCATTCGGCCACCGCCTTCGTGAAGGAGAGCTTCATCGACGAACTTGCCC ACCTGGCGGGGAAGGATCCCTATCAGTACCGCCGGCAACTCCTGGGGAAGCATCCGCGACTCGTGGGAGCCCTGGACCTG GCTACGGAAAAGGCTGGGTGGGGAAAAGCGCTGCCCGAGGGGCGGGGACGGGGAATCGCCGTCCATGAGTCCTTCGGGAG CATCGTGGCCCAGGTGGCAGAGGTATCGGTCGGTGCGAAAGGAGAAATCCGGGTGCACCGGGTCGTCTGCGCCGTGGATT GCGGCCGGTTCGTGAATCCCGGCATCATCGAGGCCCAGATGGAGTCGGGGATCGCCTTCGGCCTCTCGGCGGCCCTTCAC GGAGCCATCACCTTCAAGAACGGCCGGGTGGAGCAGTCCAACTACCATGACTACCCCATCATCCGGATGAATGAGATGCC CCGGGTGGAGACCCACATTGTCCGGAACGGGGAGAAGCCGGGAGGGATCGGCGAGCCGGGAGTCCCGCCAGTGGCTCCTG CCGTGGCTAACGCCCTGTTCGCCCTCACCGGAGCCCGCCTGCGGACCCTGCCGATGACGCCGGAACGGGTTCTGGCTGCA ACGGGCAAGACATGA
Upstream 100 bases:
>100_bases ACGAGGCCATGGAGGGAATCCTCTGCCGATGCGGCACCTACCAGCGCATCCGCCGGGCAATCCACCGGGCCGCCGGCACG CCGGCGAAAGGGGGTGCGTC
Downstream 100 bases:
>100_bases ACGTCGCCGCAATCCTTCTGGCTGCCGGCAAGTCGCAACGGATGGGACTCTGCAAACAACTCCTGCAGCTTGCCGACCGC CCCGCCGTGGCCCATTGCCT
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 724; Mature: 723
Protein sequence:
>724_residues MSGIVIVSRRDFLKAGIVLGGGLIIGVHLPGGTAAGMEPPRETFAPDAFIRIGTDDSVTVIVNKSEMGQGVYTALPMIVA EELEVDPATIRVEAAPVTPPYNHAEWGIQATGGSTSVRSEWDRLARAGATARMMLVAAAAETWKVKPGQCRAEKGFVLHQ ASGRRLSYGKLAERAARLKPPAEVQLKSPKDYSVIGRPVKRLDTPAKVDGTALFGLDVAIPGMLTAVVARPPVFGAKAMK IHHDKAEKVPGVKRVIPIDAGVAVIAESFPAAVKGRETLEIEWNEGPLAGLDSGRQRDEYAEMAKRPGAVAARRGDPDAA LKQAVKRIDAVYELPYLAHAPLEPLNCVARVEPGRCDIWTGTQMQTGDRNAAAKITGLPPEKITLRTMFLGGGFGRRAVP DSHFVREAVQASKAMGKPVKVVWTRDDDIHGGWYRPTFHNELSAGLDAAGMPVAWKHRIVCQSIAIGTPFEKGMVKNGVD DTSVEGAADSPYAVPNFLCDYHMAPAGVPVLWWRSVGHSATAFVKESFIDELAHLAGKDPYQYRRQLLGKHPRLVGALDL ATEKAGWGKALPEGRGRGIAVHESFGSIVAQVAEVSVGAKGEIRVHRVVCAVDCGRFVNPGIIEAQMESGIAFGLSAALH GAITFKNGRVEQSNYHDYPIIRMNEMPRVETHIVRNGEKPGGIGEPGVPPVAPAVANALFALTGARLRTLPMTPERVLAA TGKT
Sequences:
>Translated_724_residues MSGIVIVSRRDFLKAGIVLGGGLIIGVHLPGGTAAGMEPPRETFAPDAFIRIGTDDSVTVIVNKSEMGQGVYTALPMIVA EELEVDPATIRVEAAPVTPPYNHAEWGIQATGGSTSVRSEWDRLARAGATARMMLVAAAAETWKVKPGQCRAEKGFVLHQ ASGRRLSYGKLAERAARLKPPAEVQLKSPKDYSVIGRPVKRLDTPAKVDGTALFGLDVAIPGMLTAVVARPPVFGAKAMK IHHDKAEKVPGVKRVIPIDAGVAVIAESFPAAVKGRETLEIEWNEGPLAGLDSGRQRDEYAEMAKRPGAVAARRGDPDAA LKQAVKRIDAVYELPYLAHAPLEPLNCVARVEPGRCDIWTGTQMQTGDRNAAAKITGLPPEKITLRTMFLGGGFGRRAVP DSHFVREAVQASKAMGKPVKVVWTRDDDIHGGWYRPTFHNELSAGLDAAGMPVAWKHRIVCQSIAIGTPFEKGMVKNGVD DTSVEGAADSPYAVPNFLCDYHMAPAGVPVLWWRSVGHSATAFVKESFIDELAHLAGKDPYQYRRQLLGKHPRLVGALDL ATEKAGWGKALPEGRGRGIAVHESFGSIVAQVAEVSVGAKGEIRVHRVVCAVDCGRFVNPGIIEAQMESGIAFGLSAALH GAITFKNGRVEQSNYHDYPIIRMNEMPRVETHIVRNGEKPGGIGEPGVPPVAPAVANALFALTGARLRTLPMTPERVLAA TGKT >Mature_723_residues SGIVIVSRRDFLKAGIVLGGGLIIGVHLPGGTAAGMEPPRETFAPDAFIRIGTDDSVTVIVNKSEMGQGVYTALPMIVAE ELEVDPATIRVEAAPVTPPYNHAEWGIQATGGSTSVRSEWDRLARAGATARMMLVAAAAETWKVKPGQCRAEKGFVLHQA SGRRLSYGKLAERAARLKPPAEVQLKSPKDYSVIGRPVKRLDTPAKVDGTALFGLDVAIPGMLTAVVARPPVFGAKAMKI HHDKAEKVPGVKRVIPIDAGVAVIAESFPAAVKGRETLEIEWNEGPLAGLDSGRQRDEYAEMAKRPGAVAARRGDPDAAL KQAVKRIDAVYELPYLAHAPLEPLNCVARVEPGRCDIWTGTQMQTGDRNAAAKITGLPPEKITLRTMFLGGGFGRRAVPD SHFVREAVQASKAMGKPVKVVWTRDDDIHGGWYRPTFHNELSAGLDAAGMPVAWKHRIVCQSIAIGTPFEKGMVKNGVDD TSVEGAADSPYAVPNFLCDYHMAPAGVPVLWWRSVGHSATAFVKESFIDELAHLAGKDPYQYRRQLLGKHPRLVGALDLA TEKAGWGKALPEGRGRGIAVHESFGSIVAQVAEVSVGAKGEIRVHRVVCAVDCGRFVNPGIIEAQMESGIAFGLSAALHG AITFKNGRVEQSNYHDYPIIRMNEMPRVETHIVRNGEKPGGIGEPGVPPVAPAVANALFALTGARLRTLPMTPERVLAAT GKT
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786478, Length=401, Percent_Identity=25.9351620947631, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1789230, Length=126, Percent_Identity=31.7460317460317, Blast_Score=68, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 77423; Mature: 77292
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIVIVSRRDFLKAGIVLGGGLIIGVHLPGGTAAGMEPPRETFAPDAFIRIGTDDSVTV CCCEEEEECCHHHHHHHEEECCEEEEEECCCCCCCCCCCCHHHCCCCCEEEECCCCCEEE IVNKSEMGQGVYTALPMIVAEELEVDPATIRVEAAPVTPPYNHAEWGIQATGGSTSVRSE EEECHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCHHHHH WDRLARAGATARMMLVAAAAETWKVKPGQCRAEKGFVLHQASGRRLSYGKLAERAARLKP HHHHHHCCCHHHHHEEEEHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCC PAEVQLKSPKDYSVIGRPVKRLDTPAKVDGTALFGLDVAIPGMLTAVVARPPVFGAKAMK CCCEEECCCCCCHHHCCCHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCEEE IHHDKAEKVPGVKRVIPIDAGVAVIAESFPAAVKGRETLEIEWNEGPLAGLDSGRQRDEY EECCHHHHCCCCEEEEECCCCHHHHHHHCCHHHCCCEEEEEEECCCCCCCCCCCCCHHHH AEMAKRPGAVAARRGDPDAALKQAVKRIDAVYELPYLAHAPLEPLNCVARVEPGRCDIWT HHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHEEEECCCCEEEEC GTQMQTGDRNAAAKITGLPPEKITLRTMFLGGGFGRRAVPDSHFVREAVQASKAMGKPVK CCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEE VVWTRDDDIHGGWYRPTFHNELSAGLDAAGMPVAWKHRIVCQSIAIGTPFEKGMVKNGVD EEEECCCCCCCCEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCC DTSVEGAADSPYAVPNFLCDYHMAPAGVPVLWWRSVGHSATAFVKESFIDELAHLAGKDP CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHCCCH YQYRRQLLGKHPRLVGALDLATEKAGWGKALPEGRGRGIAVHESFGSIVAQVAEVSVGAK HHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCC GEIRVHRVVCAVDCGRFVNPGIIEAQMESGIAFGLSAALHGAITFKNGRVEQSNYHDYPI CCEEEEEEEEEECCCCCCCCCEEEHHHHCCHHHHHHHHHEEEEEECCCEEECCCCCCCCE IRMNEMPRVETHIVRNGEKPGGIGEPGVPPVAPAVANALFALTGARLRTLPMTPERVLAA EEECCCCCHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHC TGKT CCCC >Mature Secondary Structure SGIVIVSRRDFLKAGIVLGGGLIIGVHLPGGTAAGMEPPRETFAPDAFIRIGTDDSVTV CCEEEEECCHHHHHHHEEECCEEEEEECCCCCCCCCCCCHHHCCCCCEEEECCCCCEEE IVNKSEMGQGVYTALPMIVAEELEVDPATIRVEAAPVTPPYNHAEWGIQATGGSTSVRSE EEECHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCHHHHH WDRLARAGATARMMLVAAAAETWKVKPGQCRAEKGFVLHQASGRRLSYGKLAERAARLKP HHHHHHCCCHHHHHEEEEHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCC PAEVQLKSPKDYSVIGRPVKRLDTPAKVDGTALFGLDVAIPGMLTAVVARPPVFGAKAMK CCCEEECCCCCCHHHCCCHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCEEE IHHDKAEKVPGVKRVIPIDAGVAVIAESFPAAVKGRETLEIEWNEGPLAGLDSGRQRDEY EECCHHHHCCCCEEEEECCCCHHHHHHHCCHHHCCCEEEEEEECCCCCCCCCCCCCHHHH AEMAKRPGAVAARRGDPDAALKQAVKRIDAVYELPYLAHAPLEPLNCVARVEPGRCDIWT HHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHEEEECCCCEEEEC GTQMQTGDRNAAAKITGLPPEKITLRTMFLGGGFGRRAVPDSHFVREAVQASKAMGKPVK CCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEE VVWTRDDDIHGGWYRPTFHNELSAGLDAAGMPVAWKHRIVCQSIAIGTPFEKGMVKNGVD EEEECCCCCCCCEECCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCC DTSVEGAADSPYAVPNFLCDYHMAPAGVPVLWWRSVGHSATAFVKESFIDELAHLAGKDP CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHCCCH YQYRRQLLGKHPRLVGALDLATEKAGWGKALPEGRGRGIAVHESFGSIVAQVAEVSVGAK HHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCC GEIRVHRVVCAVDCGRFVNPGIIEAQMESGIAFGLSAALHGAITFKNGRVEQSNYHDYPI CCEEEEEEEEEECCCCCCCCCEEEHHHHCCHHHHHHHHHEEEEEECCCEEECCCCCCCCE IRMNEMPRVETHIVRNGEKPGGIGEPGVPPVAPAVANALFALTGARLRTLPMTPERVLAA EEECCCCCHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHC TGKT CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]