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The map label for this gene is ybhS [H]

Identifier: 78221876

GI number: 78221876

Start: 716269

End: 717402

Strand: Reverse

Name: ybhS [H]

Synonym: Gmet_0656

Alternate gene names: 78221876

Gene position: 717402-716269 (Counterclockwise)

Preceding gene: 78221877

Following gene: 78221875

Centisome position: 17.95

GC content: 64.11

Gene sequence:

>1134_bases
ATGAAGCTCCAGCGCGTGGCGGCCGTGGCCCGCAAGGAATTCATTCACGTCTTTCGGGATCCCCGGAGCCTCGGCATGGG
GATCGCGATTCCGATGCTGCTGCTCTTTCTCTTCGGCTACGCCCTCACCCTGGACGTGGACCGGGTGCCGCTCATGGTCT
GGGACCAGAGCGCCACCCCCGAGAGCCGGGACTTCATCAGCCACTTCGCCGGCTCCCGTTACTTCACCCTGGCTGGGCGC
GTCGGCACCTACCGGGAAATCGAGATTGCCATCGACCGGCGCGACGTCCTCATGGCCCTGGTGATCCCCACCGATTTCGC
CCGCAAGGTTCGGACGGGGATGCCGGCGCCGGTGCAACTGATCCTGGACGGGAGCGACTCCAACACTGCCACCATCGCCT
TGGGGTATGCCGAGGCCGTGACCTCTGTCTGGGCCCGGGAGGTGGTCCTTGAGCAGACCCGACGCTTCGGGCCTGTTCCC
GCCGCCGGCAGCGTGGATGTGCGCCCCCGGGTCTGGTTCAACACCGACATGGTCTCCCGCAACTACATCTTCCCGGGGCT
CATCGCGGTCATCATGATGGTCATCGCCGCGCTCCTCACCTCCCTCACCGTGGCTAGGGAGTGGGAAACCGGCACCATGG
AGCAACTCATCACCACCCCGCTCCGGGGGGCGGAGCTCATCGTCGGCAAACTCATCCCCTATTTCGCCATCGGCATCCTC
GACCTGGTCCTCTCGGTCCTGGTGGGGGAGTTCGTCTTTGACATCCCGCTGCGGGGGAGCCTCTGGCTCCTGTTCGCCAT
GTCGCTCATCTTTCTCACCTGCGCCCTCGCCTTCGGGCTCCTCATCAGCATCGTCACCAAGAACCAGCGACTCGCCTCCC
AGACCGCCATGGTGACCACCATGCTCCCGGCATTCCTCCTCTCCGGCTTCATCTTCCCCATCGAGAACATGCCTCCCCCC
ATCCAGGCAGTAACCCACATCATTACGGCCCGCTACTTTGTCACCATCCTGCGGGATATCTATCTGAAGGGAGTGGGGCT
CGGCGTGCTGGCACCGGAGGCGGCGTTTCTGGCGGTCTTCGGAGTGGTGGTCCTGGCCCTGGCGGTAAAAAAATTCCGGA
AGAAGGTGGAGTGA

Upstream 100 bases:

>100_bases
TGGACGGCATCGAGCGGATCGTCCCCTCCCTGGAGGATGTCTTCGTCTCCCTCATCGAGGCCAGGGACCGGGAGACCGCG
CCCCAACGGGAGTTCAGACG

Downstream 100 bases:

>100_bases
GGCGATGCTGGAGCGGCTCAGATGCATGCTAGTAAAAGAAATCATCCAGGCCCTTCGGGATCCCCGAATGCGCTTCATTC
TCTTCATAATCCCCGCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKLQRVAAVARKEFIHVFRDPRSLGMGIAIPMLLLFLFGYALTLDVDRVPLMVWDQSATPESRDFISHFAGSRYFTLAGR
VGTYREIEIAIDRRDVLMALVIPTDFARKVRTGMPAPVQLILDGSDSNTATIALGYAEAVTSVWAREVVLEQTRRFGPVP
AAGSVDVRPRVWFNTDMVSRNYIFPGLIAVIMMVIAALLTSLTVAREWETGTMEQLITTPLRGAELIVGKLIPYFAIGIL
DLVLSVLVGEFVFDIPLRGSLWLLFAMSLIFLTCALAFGLLISIVTKNQRLASQTAMVTTMLPAFLLSGFIFPIENMPPP
IQAVTHIITARYFVTILRDIYLKGVGLGVLAPEAAFLAVFGVVVLALAVKKFRKKVE

Sequences:

>Translated_377_residues
MKLQRVAAVARKEFIHVFRDPRSLGMGIAIPMLLLFLFGYALTLDVDRVPLMVWDQSATPESRDFISHFAGSRYFTLAGR
VGTYREIEIAIDRRDVLMALVIPTDFARKVRTGMPAPVQLILDGSDSNTATIALGYAEAVTSVWAREVVLEQTRRFGPVP
AAGSVDVRPRVWFNTDMVSRNYIFPGLIAVIMMVIAALLTSLTVAREWETGTMEQLITTPLRGAELIVGKLIPYFAIGIL
DLVLSVLVGEFVFDIPLRGSLWLLFAMSLIFLTCALAFGLLISIVTKNQRLASQTAMVTTMLPAFLLSGFIFPIENMPPP
IQAVTHIITARYFVTILRDIYLKGVGLGVLAPEAAFLAVFGVVVLALAVKKFRKKVE
>Mature_377_residues
MKLQRVAAVARKEFIHVFRDPRSLGMGIAIPMLLLFLFGYALTLDVDRVPLMVWDQSATPESRDFISHFAGSRYFTLAGR
VGTYREIEIAIDRRDVLMALVIPTDFARKVRTGMPAPVQLILDGSDSNTATIALGYAEAVTSVWAREVVLEQTRRFGPVP
AAGSVDVRPRVWFNTDMVSRNYIFPGLIAVIMMVIAALLTSLTVAREWETGTMEQLITTPLRGAELIVGKLIPYFAIGIL
DLVLSVLVGEFVFDIPLRGSLWLLFAMSLIFLTCALAFGLLISIVTKNQRLASQTAMVTTMLPAFLLSGFIFPIENMPPP
IQAVTHIITARYFVTILRDIYLKGVGLGVLAPEAAFLAVFGVVVLALAVKKFRKKVE

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=346, Percent_Identity=41.3294797687861, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI1787010, Length=373, Percent_Identity=31.3672922252011, Blast_Score=194, Evalue=7e-51,
Organism=Escherichia coli, GI48994943, Length=346, Percent_Identity=29.1907514450867, Blast_Score=173, Evalue=2e-44,
Organism=Escherichia coli, GI226510979, Length=360, Percent_Identity=22.5, Blast_Score=79, Evalue=5e-16,
Organism=Drosophila melanogaster, GI85725260, Length=415, Percent_Identity=20.9638554216867, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI85725262, Length=415, Percent_Identity=20.9638554216867, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41623; Mature: 41623

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQRVAAVARKEFIHVFRDPRSLGMGIAIPMLLLFLFGYALTLDVDRVPLMVWDQSATP
CCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCC
ESRDFISHFAGSRYFTLAGRVGTYREIEIAIDRRDVLMALVIPTDFARKVRTGMPAPVQL
CHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEHHHEEEEEEECCHHHHHHHCCCCCCEEE
ILDGSDSNTATIALGYAEAVTSVWAREVVLEQTRRFGPVPAAGSVDVRPRVWFNTDMVSR
EEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCC
NYIFPGLIAVIMMVIAALLTSLTVAREWETGTMEQLITTPLRGAELIVGKLIPYFAIGIL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
DLVLSVLVGEFVFDIPLRGSLWLLFAMSLIFLTCALAFGLLISIVTKNQRLASQTAMVTT
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MLPAFLLSGFIFPIENMPPPIQAVTHIITARYFVTILRDIYLKGVGLGVLAPEAAFLAVF
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
GVVVLALAVKKFRKKVE
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLQRVAAVARKEFIHVFRDPRSLGMGIAIPMLLLFLFGYALTLDVDRVPLMVWDQSATP
CCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCC
ESRDFISHFAGSRYFTLAGRVGTYREIEIAIDRRDVLMALVIPTDFARKVRTGMPAPVQL
CHHHHHHHHCCCCEEEEECCCCCCEEEEEEEEHHHEEEEEEECCHHHHHHHCCCCCCEEE
ILDGSDSNTATIALGYAEAVTSVWAREVVLEQTRRFGPVPAAGSVDVRPRVWFNTDMVSR
EEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCC
NYIFPGLIAVIMMVIAALLTSLTVAREWETGTMEQLITTPLRGAELIVGKLIPYFAIGIL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
DLVLSVLVGEFVFDIPLRGSLWLLFAMSLIFLTCALAFGLLISIVTKNQRLASQTAMVTT
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MLPAFLLSGFIFPIENMPPPIQAVTHIITARYFVTILRDIYLKGVGLGVLAPEAAFLAVF
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
GVVVLALAVKKFRKKVE
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]