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The map label for this gene is ybhR [H]

Identifier: 78221875

GI number: 78221875

Start: 715134

End: 716264

Strand: Reverse

Name: ybhR [H]

Synonym: Gmet_0655

Alternate gene names: 78221875

Gene position: 716264-715134 (Counterclockwise)

Preceding gene: 78221876

Following gene: 78221767

Centisome position: 17.92

GC content: 59.06

Gene sequence:

>1131_bases
ATGCTGGAGCGGCTCAGATGCATGCTAGTAAAAGAAATCATCCAGGCCCTTCGGGATCCCCGAATGCGCTTCATTCTCTT
CATAATCCCCGCCGTTCAGACGGTGATCTTCGGCTATGCGGTGAACACCGACGTACGGAACGTGACGACCGCTGTCTACG
ACCTGGACAACTCCCCCGAAAGCCGGGACTTGGTCGCCCGGTTCCAGCGATCGGGGTACTTCCTCATCACCCAGCGGATC
AACCATGAAAGCCGCGTACGGGAGCTCATGGACCGGGGGGAGGTGAAGGCAATCCTCCGGATAAACCGGGGCTTCGGCGC
CGGGCTGGGGGGAGGACGCACGGCTCCGCTCCAGATCATCCTGGACGGCACCGACTCCAATACCGCCGGCATCGTCCTGA
ACTATGCATCGCGGATCACCGCCCGCCTTAACGACGAACTGCGGGGAGCCCAACTCCCCCGAAGCGCAGGGGCACGTGTC
TTCGCGGGTGGCGTCCAACTCCAGAGCCGCGCCTGGTTCAACGAGAACCTGGAGAGCAGCAACTACTACGTGCCAGCAGT
CATCGCCAATATCGTCCTCATCATCACCATGCTCCTCTCCGGCATGGCCGTGGTGCGCGAGAAGGAGATCGGCACCATGG
AGCAGATAATCGTCACCCCCATCTCCAGGAGTGAATTCATTCTCGGCAAGACCATCCCCTTCGTCCTCATCGGCTTCATC
GATGTGGCAGTCATCACTGCTGTGTCGAAATTCTGGTTCCAGGTTCCCATCCGGGGAAGCCTGCCCCTCCTTTTCGGCTC
AACCGCCCTCTTTCTCATGAGCACTCTCGGCTTCGGGCTCTTCATCTCCACCATCAGCACCACCCAGCAGCAGGCCATGA
TGAGCTCATTCTTTTTCATCTTCCCCGCCATGCTCCTCTCGGGGTTCGCCTTCCCCATCGAGAACATGCCACGGGTGATC
CAGTACTTCACCTATCTGAACCCGCTCCGCTACTATCTGGTCATCATTCGGGGGATTTTTTTGAAAGGGGTGGGGGTCGA
TATTCTCTGGCCCCAGATGACGGGTCTGCTGGTGCTGGGAAGTGTCATTCTGGGGTTTGCAGTGAAACGGTTCCGGAAGA
CCCTGGCGTAG

Upstream 100 bases:

>100_bases
CTCGGCGTGCTGGCACCGGAGGCGGCGTTTCTGGCGGTCTTCGGAGTGGTGGTCCTGGCCCTGGCGGTAAAAAAATTCCG
GAAGAAGGTGGAGTGAGGCG

Downstream 100 bases:

>100_bases
GAAGGTGGCAAGAAGGTTATAGGGGAGAGGGGAAATTATAGACGTCTTGGCTTGGGCCGGAAGACAGCATGATCACGAAA
GCTCACGTTTGAAATCCACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MLERLRCMLVKEIIQALRDPRMRFILFIIPAVQTVIFGYAVNTDVRNVTTAVYDLDNSPESRDLVARFQRSGYFLITQRI
NHESRVRELMDRGEVKAILRINRGFGAGLGGGRTAPLQIILDGTDSNTAGIVLNYASRITARLNDELRGAQLPRSAGARV
FAGGVQLQSRAWFNENLESSNYYVPAVIANIVLIITMLLSGMAVVREKEIGTMEQIIVTPISRSEFILGKTIPFVLIGFI
DVAVITAVSKFWFQVPIRGSLPLLFGSTALFLMSTLGFGLFISTISTTQQQAMMSSFFFIFPAMLLSGFAFPIENMPRVI
QYFTYLNPLRYYLVIIRGIFLKGVGVDILWPQMTGLLVLGSVILGFAVKRFRKTLA

Sequences:

>Translated_376_residues
MLERLRCMLVKEIIQALRDPRMRFILFIIPAVQTVIFGYAVNTDVRNVTTAVYDLDNSPESRDLVARFQRSGYFLITQRI
NHESRVRELMDRGEVKAILRINRGFGAGLGGGRTAPLQIILDGTDSNTAGIVLNYASRITARLNDELRGAQLPRSAGARV
FAGGVQLQSRAWFNENLESSNYYVPAVIANIVLIITMLLSGMAVVREKEIGTMEQIIVTPISRSEFILGKTIPFVLIGFI
DVAVITAVSKFWFQVPIRGSLPLLFGSTALFLMSTLGFGLFISTISTTQQQAMMSSFFFIFPAMLLSGFAFPIENMPRVI
QYFTYLNPLRYYLVIIRGIFLKGVGVDILWPQMTGLLVLGSVILGFAVKRFRKTLA
>Mature_376_residues
MLERLRCMLVKEIIQALRDPRMRFILFIIPAVQTVIFGYAVNTDVRNVTTAVYDLDNSPESRDLVARFQRSGYFLITQRI
NHESRVRELMDRGEVKAILRINRGFGAGLGGGRTAPLQIILDGTDSNTAGIVLNYASRITARLNDELRGAQLPRSAGARV
FAGGVQLQSRAWFNENLESSNYYVPAVIANIVLIITMLLSGMAVVREKEIGTMEQIIVTPISRSEFILGKTIPFVLIGFI
DVAVITAVSKFWFQVPIRGSLPLLFGSTALFLMSTLGFGLFISTISTTQQQAMMSSFFFIFPAMLLSGFAFPIENMPRVI
QYFTYLNPLRYYLVIIRGIFLKGVGVDILWPQMTGLLVLGSVILGFAVKRFRKTLA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=374, Percent_Identity=34.2245989304813, Blast_Score=246, Evalue=1e-66,
Organism=Escherichia coli, GI1787011, Length=346, Percent_Identity=34.1040462427746, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI48994943, Length=374, Percent_Identity=27.5401069518717, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI226510979, Length=331, Percent_Identity=28.3987915407855, Blast_Score=120, Evalue=1e-28,
Organism=Drosophila melanogaster, GI85725260, Length=380, Percent_Identity=21.0526315789474, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI85725262, Length=380, Percent_Identity=21.0526315789474, Blast_Score=72, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24650855, Length=366, Percent_Identity=21.5846994535519, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24650853, Length=369, Percent_Identity=21.4092140921409, Blast_Score=68, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41986; Mature: 41986

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLERLRCMLVKEIIQALRDPRMRFILFIIPAVQTVIFGYAVNTDVRNVTTAVYDLDNSPE
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCC
SRDLVARFQRSGYFLITQRINHESRVRELMDRGEVKAILRINRGFGAGLGGGRTAPLQII
HHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEE
LDGTDSNTAGIVLNYASRITARLNDELRGAQLPRSAGARVFAGGVQLQSRAWFNENLESS
EECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCHHCCCEEEECCEEEEHHHHHCCCCCCC
NYYVPAVIANIVLIITMLLSGMAVVREKEIGTMEQIIVTPISRSEFILGKTIPFVLIGFI
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHCCCCCCCCEEECCHHHHHHHHHH
DVAVITAVSKFWFQVPIRGSLPLLFGSTALFLMSTLGFGLFISTISTTQQQAMMSSFFFI
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPAMLLSGFAFPIENMPRVIQYFTYLNPLRYYLVIIRGIFLKGVGVDILWPQMTGLLVLG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHH
SVILGFAVKRFRKTLA
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLERLRCMLVKEIIQALRDPRMRFILFIIPAVQTVIFGYAVNTDVRNVTTAVYDLDNSPE
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCC
SRDLVARFQRSGYFLITQRINHESRVRELMDRGEVKAILRINRGFGAGLGGGRTAPLQII
HHHHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEE
LDGTDSNTAGIVLNYASRITARLNDELRGAQLPRSAGARVFAGGVQLQSRAWFNENLESS
EECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCHHCCCEEEECCEEEEHHHHHCCCCCCC
NYYVPAVIANIVLIITMLLSGMAVVREKEIGTMEQIIVTPISRSEFILGKTIPFVLIGFI
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHCCCCCCCCEEECCHHHHHHHHHH
DVAVITAVSKFWFQVPIRGSLPLLFGSTALFLMSTLGFGLFISTISTTQQQAMMSSFFFI
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FPAMLLSGFAFPIENMPRVIQYFTYLNPLRYYLVIIRGIFLKGVGVDILWPQMTGLLVLG
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHH
SVILGFAVKRFRKTLA
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]