| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221822
Identifier: 78221822
GI number: 78221822
Start: 671608
End: 672657
Strand: Direct
Name: 78221822
Synonym: Gmet_0601
Alternate gene names: NA
Gene position: 671608-672657 (Clockwise)
Preceding gene: 78221821
Following gene: 78221823
Centisome position: 16.8
GC content: 59.43
Gene sequence:
>1050_bases ATGAAGCGCATCGGGATCACATTCATCGCGCTCCTCGCTTTGGCCGCTCCGGCCATGGCGGGACACGTGGCAACCATAGG GACGGGCACGTGCGGTTCCTGTCATCGAACCAATCTGGTCACCCAGCACGGCGGTTTTGTCGCCACCGTCTGCCAGACCT GCCATGACAGCACCGTTGCTGCCGTCAAGGATACCATTGCCACTGGTGTGGCGGGACAGCCCTATACCTGCTCCAACTGC CACGGGGCCGAGACGCATTTGAGCAAGCATGGTGATTACGCCGCGAATTTCGCCGCCTATAACGGCGTGGAACCGGTTAC CAGTGGGATCTGGACGGCACCGTCATCGTACACAAAGGTTACTCCTGCAACCAAGGAGTACCAGGTATGCGTCAAGTGCC ACTCATCCAACGGTCTTGGTTCAACCACCAATAGCGTGAGCGGCGTGACGGGACCGTCGGGGCTGCTTCTTACCGACCAA GCCATGGAATTCAGCCAGTATAACCGCTCCGGCCACCCCATTGTCACCGGTCTCAACAATTACCCCAATTCTCCCGCGCC CAAGGCCCTTGTGAAGACTCAACTGTCTTCGCCCTGGAACGTCAACATGGGCAAGCAGACAATGAAGTGCTTCGACTGCC ACGGCGCCGATGGCAAGTTGGTTGGCGTCGGCAGGGACTGGCCCTACAACTCCGCCACCGGCCAGCTCTGGAAGCTCGGT GACGCCAGCAACAGCAAGCTGTTCTGCAAGAACTGCCACCCCCTCGTCAATACGAACAACACGCACTCGGAAAGCAACCA CTCTAAATACCCCTGCGTGTATTGCCACACGCGGGTACCCCATGGCGGCAAGGTAAGCCGGTTGATTGTGACCTTCACTT CGGGACTGCCAAGCCGGTACTATCCTGACGGGAAAGGTGGCGGGACCCCCAGCTTGCAGGACAAATTGTTGCGCTACACC AAGGCGACATCGGCAAGCCGCTATGACACGCCGTCCTGCGACGCGGATTGCCACGGCTCCCACCAGAACACAACCGGTGA GGCCTGGTAG
Upstream 100 bases:
>100_bases CACCCCCACTTCGAACAGCCTCTACGTTGCCGAGGGTGCCTTCCAGGTACAGTAACGTAGTGAGACTAATCAGAGTCCAG GAACTGAAAGGAGAAACGAA
Downstream 100 bases:
>100_bases GTCCTCTGGCCGGACAGTGAGGGTTGCCTTGCTGTTTGCCGGCGGTATTTAAACCCGGGGCGTCTGTCGTATGCGGCAGG CGCCCCTTTTACGTCATCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MKRIGITFIALLALAAPAMAGHVATIGTGTCGSCHRTNLVTQHGGFVATVCQTCHDSTVAAVKDTIATGVAGQPYTCSNC HGAETHLSKHGDYAANFAAYNGVEPVTSGIWTAPSSYTKVTPATKEYQVCVKCHSSNGLGSTTNSVSGVTGPSGLLLTDQ AMEFSQYNRSGHPIVTGLNNYPNSPAPKALVKTQLSSPWNVNMGKQTMKCFDCHGADGKLVGVGRDWPYNSATGQLWKLG DASNSKLFCKNCHPLVNTNNTHSESNHSKYPCVYCHTRVPHGGKVSRLIVTFTSGLPSRYYPDGKGGGTPSLQDKLLRYT KATSASRYDTPSCDADCHGSHQNTTGEAW
Sequences:
>Translated_349_residues MKRIGITFIALLALAAPAMAGHVATIGTGTCGSCHRTNLVTQHGGFVATVCQTCHDSTVAAVKDTIATGVAGQPYTCSNC HGAETHLSKHGDYAANFAAYNGVEPVTSGIWTAPSSYTKVTPATKEYQVCVKCHSSNGLGSTTNSVSGVTGPSGLLLTDQ AMEFSQYNRSGHPIVTGLNNYPNSPAPKALVKTQLSSPWNVNMGKQTMKCFDCHGADGKLVGVGRDWPYNSATGQLWKLG DASNSKLFCKNCHPLVNTNNTHSESNHSKYPCVYCHTRVPHGGKVSRLIVTFTSGLPSRYYPDGKGGGTPSLQDKLLRYT KATSASRYDTPSCDADCHGSHQNTTGEAW >Mature_349_residues MKRIGITFIALLALAAPAMAGHVATIGTGTCGSCHRTNLVTQHGGFVATVCQTCHDSTVAAVKDTIATGVAGQPYTCSNC HGAETHLSKHGDYAANFAAYNGVEPVTSGIWTAPSSYTKVTPATKEYQVCVKCHSSNGLGSTTNSVSGVTGPSGLLLTDQ AMEFSQYNRSGHPIVTGLNNYPNSPAPKALVKTQLSSPWNVNMGKQTMKCFDCHGADGKLVGVGRDWPYNSATGQLWKLG DASNSKLFCKNCHPLVNTNNTHSESNHSKYPCVYCHTRVPHGGKVSRLIVTFTSGLPSRYYPDGKGGGTPSLQDKLLRYT KATSASRYDTPSCDADCHGSHQNTTGEAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36967; Mature: 36967
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIGITFIALLALAAPAMAGHVATIGTGTCGSCHRTNLVTQHGGFVATVCQTCHDSTVA CCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHCCEEECCCCCHHHHHHHHCCCHHH AVKDTIATGVAGQPYTCSNCHGAETHLSKHGDYAANFAAYNGVEPVTSGIWTAPSSYTKV HHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCHHHHCCCCCCCCCEEC TPATKEYQVCVKCHSSNGLGSTTNSVSGVTGPSGLLLTDQAMEFSQYNRSGHPIVTGLNN CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCEEEECCC YPNSPAPKALVKTQLSSPWNVNMGKQTMKCFDCHGADGKLVGVGRDWPYNSATGQLWKLG CCCCCCCHHHHHHHCCCCCCCCCCHHHHHEEECCCCCCCEEECCCCCCCCCCCCCEEEEC DASNSKLFCKNCHPLVNTNNTHSESNHSKYPCVYCHTRVPHGGKVSRLIVTFTSGLPSRY CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCC YPDGKGGGTPSLQDKLLRYTKATSASRYDTPSCDADCHGSHQNTTGEAW CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRIGITFIALLALAAPAMAGHVATIGTGTCGSCHRTNLVTQHGGFVATVCQTCHDSTVA CCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHCCEEECCCCCHHHHHHHHCCCHHH AVKDTIATGVAGQPYTCSNCHGAETHLSKHGDYAANFAAYNGVEPVTSGIWTAPSSYTKV HHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCHHHHCCCCCCCCCEEC TPATKEYQVCVKCHSSNGLGSTTNSVSGVTGPSGLLLTDQAMEFSQYNRSGHPIVTGLNN CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCEEEECCC YPNSPAPKALVKTQLSSPWNVNMGKQTMKCFDCHGADGKLVGVGRDWPYNSATGQLWKLG CCCCCCCHHHHHHHCCCCCCCCCCHHHHHEEECCCCCCCEEECCCCCCCCCCCCCEEEEC DASNSKLFCKNCHPLVNTNNTHSESNHSKYPCVYCHTRVPHGGKVSRLIVTFTSGLPSRY CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCC YPDGKGGGTPSLQDKLLRYTKATSASRYDTPSCDADCHGSHQNTTGEAW CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA