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The map label for this gene is 78221809

Identifier: 78221809

GI number: 78221809

Start: 653772

End: 655613

Strand: Direct

Name: 78221809

Synonym: Gmet_0588

Alternate gene names: NA

Gene position: 653772-655613 (Clockwise)

Preceding gene: 78221808

Following gene: 78221810

Centisome position: 16.35

GC content: 63.08

Gene sequence:

>1842_bases
GTGAATTTCTTTTCTCTGAAACGGGAACAGGCGCTGGATTTCGTCTGCCTTGCGGTGGTGGTCCTGGCTGTGTATGGGAG
AGCCCTTGGCCATGATTTCCAGACCAACTGGGATGACAACTGGTATGTGCTCTATAACGAAGCCGTGCGCGGTTTTTCAT
GGGACCATATCCGCAGCGCATTCACCGGTTACTTCGGCGGATATTACGCCCCGGTGCAGGTCGTTTCGTACATGCTTGAC
TATTCGCTCTGGGGGCTCTGGCCCGGCGGCTTCATCCTGACGAACATCCTGCTGCACCTGCTGAACGGGCTCCTGATCTA
CCGGTTGCTCCTCGGTTGGTACGGGCAGCGTCTGGTTGCTCTGGTGGCATCGGCAATTTTCCTGGTTCATCCGGTCCAGG
TCGAGGCCGTTGCCTGGATCTCCCAGAGAAAATCACTCCTGGCCCTGCTCTTCTTCCTGATCGCCTGGAAACAGTACTGC
CGCTATCGCCTGGCCCCGACAGGGAGAGGACGATGGAGCTATGGGGCATCCTGCGGCGCGTTCCTGTTATCGTTGCTGGC
CAAGCCGACCACGGTGGTCCTTCCCGTAATCCTGGTGCTGTACGACCACTGCTTTGCCGATGGGGACCGACGGTCCCGGT
ATGCGGACAAGGTTCCCTACGTGCTGCTGGCCGGCATTTTTTCTGCCCTGACCCTCTATACCCAGTCGCCGGAGGTGGCG
GAAGGTGGCCGCACCGCCTACCACGGCGGGAGTCCCCTGGGGACGCTCTACACGATGCTCCCCGTGTTCTGCCGTTATCT
GGAAATGCTGGTCTGGCCCGCCGGCCTCAGTGCCGCCTATGCTCCCCCGATCCGGCAGGCCGTTGACGCCACAGTGGTCC
TGTCGGCCCTCCTCCTTGCCGGCATCGCCGTGGCCTCGGTCCGGCTGTATCGGGTCGACCGGCGGCTCGCCTTCTGGGTC
CTCTTTTTCTGGGTCGGGCTCCTGCCGGTTTCCCAGATCGTGCCGGTCATCTCGCTGCTGTACGACCACTATCTCTATCT
CCCAATCATCGGCGCGGCCGCCTTGGCCGGATCGGGCGGGGCACTGCTGTGGGAGCGCCTGGCACCGGAGCGCCGTTTCC
TGCTCTATGCGGTTGTGCTGCCGGTGCTGGCGGCCCTTTCCGTGGCCTCTTTTCAGCGGACCGGCGTCTGGAAGAATTCC
CTGACCCTCTGGAGCGATGCCGTTGCCAAGGAACCGGGGAGCGATCTGGCATGGCAGATCCTGGGTGGATCGCTATTGGA
CGTTGGCAGGATTGCGGAGGCCAGGGAGGCTTATCAGCGGGGCTTTGCGCTCAATCGGTCAAATACGGAGATCCTCCATG
CCCTGGGGCAGATTGCCACCAACACGGGGGAGCTTGACCAGGGATACCGGATGCTGAAGAGGCTCCTGGAGCTGAAGCCC
GATTACGTCTCCGGCTGGGCCAGTCTTGGCACCAATTACATGAAACGGGGCGACTACGGGGAGGCTGAAAGGGCATACCA
GCGCGCACACTCTTTGCAACCGGAGGCGTGGCAGGTGGTGTCCTTGCTGGGGAATCTGGCGCTGACCCGGGGGCGCCTGG
AAGAGGCCCGCGGATACTTCGTGCAGGTGGAGGCACAGGCGCCGGGGGACGCCGCCAATGCCTATGCCCTGGCGAGCGTC
GAGGCCCTGTCGGGCAATGCCGATGCCGGCCTCGCCTGGCTGGAGAAGGCCGTGCAGCGGGGGTACGACGACTTCGGACG
GATGTACGACGATCCGCGGCTGTCGGCCCTGCGGGACAGCCCGCGCTTCGACCGCCTGGTGCGGAACAATGCTGGAAGAT
AG

Upstream 100 bases:

>100_bases
TCGCGTCCGCGTGCCGGGACTGTTATCTGAACTGTCATCTGGAACTGAATCTCTTGTTCGACCACAAAGCGCGGGGGCGA
TTCCGACGCGGGAGCGAGCG

Downstream 100 bases:

>100_bases
GATGCTTGTGACGATGATACGTGGTGCCGGATGGCGATGCGATGAGCCCTGTTATTTATCCTTGGCGGATTTCGAATCAT
GAAACTGTCGGTGGTGATGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide Protein); Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat-Containing Protein

Number of amino acids: Translated: 613; Mature: 613

Protein sequence:

>613_residues
MNFFSLKREQALDFVCLAVVVLAVYGRALGHDFQTNWDDNWYVLYNEAVRGFSWDHIRSAFTGYFGGYYAPVQVVSYMLD
YSLWGLWPGGFILTNILLHLLNGLLIYRLLLGWYGQRLVALVASAIFLVHPVQVEAVAWISQRKSLLALLFFLIAWKQYC
RYRLAPTGRGRWSYGASCGAFLLSLLAKPTTVVLPVILVLYDHCFADGDRRSRYADKVPYVLLAGIFSALTLYTQSPEVA
EGGRTAYHGGSPLGTLYTMLPVFCRYLEMLVWPAGLSAAYAPPIRQAVDATVVLSALLLAGIAVASVRLYRVDRRLAFWV
LFFWVGLLPVSQIVPVISLLYDHYLYLPIIGAAALAGSGGALLWERLAPERRFLLYAVVLPVLAALSVASFQRTGVWKNS
LTLWSDAVAKEPGSDLAWQILGGSLLDVGRIAEAREAYQRGFALNRSNTEILHALGQIATNTGELDQGYRMLKRLLELKP
DYVSGWASLGTNYMKRGDYGEAERAYQRAHSLQPEAWQVVSLLGNLALTRGRLEEARGYFVQVEAQAPGDAANAYALASV
EALSGNADAGLAWLEKAVQRGYDDFGRMYDDPRLSALRDSPRFDRLVRNNAGR

Sequences:

>Translated_613_residues
MNFFSLKREQALDFVCLAVVVLAVYGRALGHDFQTNWDDNWYVLYNEAVRGFSWDHIRSAFTGYFGGYYAPVQVVSYMLD
YSLWGLWPGGFILTNILLHLLNGLLIYRLLLGWYGQRLVALVASAIFLVHPVQVEAVAWISQRKSLLALLFFLIAWKQYC
RYRLAPTGRGRWSYGASCGAFLLSLLAKPTTVVLPVILVLYDHCFADGDRRSRYADKVPYVLLAGIFSALTLYTQSPEVA
EGGRTAYHGGSPLGTLYTMLPVFCRYLEMLVWPAGLSAAYAPPIRQAVDATVVLSALLLAGIAVASVRLYRVDRRLAFWV
LFFWVGLLPVSQIVPVISLLYDHYLYLPIIGAAALAGSGGALLWERLAPERRFLLYAVVLPVLAALSVASFQRTGVWKNS
LTLWSDAVAKEPGSDLAWQILGGSLLDVGRIAEAREAYQRGFALNRSNTEILHALGQIATNTGELDQGYRMLKRLLELKP
DYVSGWASLGTNYMKRGDYGEAERAYQRAHSLQPEAWQVVSLLGNLALTRGRLEEARGYFVQVEAQAPGDAANAYALASV
EALSGNADAGLAWLEKAVQRGYDDFGRMYDDPRLSALRDSPRFDRLVRNNAGR
>Mature_613_residues
MNFFSLKREQALDFVCLAVVVLAVYGRALGHDFQTNWDDNWYVLYNEAVRGFSWDHIRSAFTGYFGGYYAPVQVVSYMLD
YSLWGLWPGGFILTNILLHLLNGLLIYRLLLGWYGQRLVALVASAIFLVHPVQVEAVAWISQRKSLLALLFFLIAWKQYC
RYRLAPTGRGRWSYGASCGAFLLSLLAKPTTVVLPVILVLYDHCFADGDRRSRYADKVPYVLLAGIFSALTLYTQSPEVA
EGGRTAYHGGSPLGTLYTMLPVFCRYLEMLVWPAGLSAAYAPPIRQAVDATVVLSALLLAGIAVASVRLYRVDRRLAFWV
LFFWVGLLPVSQIVPVISLLYDHYLYLPIIGAAALAGSGGALLWERLAPERRFLLYAVVLPVLAALSVASFQRTGVWKNS
LTLWSDAVAKEPGSDLAWQILGGSLLDVGRIAEAREAYQRGFALNRSNTEILHALGQIATNTGELDQGYRMLKRLLELKP
DYVSGWASLGTNYMKRGDYGEAERAYQRAHSLQPEAWQVVSLLGNLALTRGRLEEARGYFVQVEAQAPGDAANAYALASV
EALSGNADAGLAWLEKAVQRGYDDFGRMYDDPRLSALRDSPRFDRLVRNNAGR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI118766328, Length=241, Percent_Identity=26.1410788381743, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI118766330, Length=241, Percent_Identity=26.1410788381743, Blast_Score=67, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI25147174, Length=543, Percent_Identity=24.4935543278085, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17560436, Length=430, Percent_Identity=24.1860465116279, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI161076610, Length=205, Percent_Identity=31.7073170731707, Blast_Score=67, Evalue=4e-11,
Organism=Drosophila melanogaster, GI19920486, Length=205, Percent_Identity=31.7073170731707, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68174; Mature: 68174

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFSLKREQALDFVCLAVVVLAVYGRALGHDFQTNWDDNWYVLYNEAVRGFSWDHIRSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCCHHHHHHH
FTGYFGGYYAPVQVVSYMLDYSLWGLWPGGFILTNILLHLLNGLLIYRLLLGWYGQRLVA
HHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVASAIFLVHPVQVEAVAWISQRKSLLALLFFLIAWKQYCRYRLAPTGRGRWSYGASCGA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHH
FLLSLLAKPTTVVLPVILVLYDHCFADGDRRSRYADKVPYVLLAGIFSALTLYTQSPEVA
HHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHH
EGGRTAYHGGSPLGTLYTMLPVFCRYLEMLVWPAGLSAAYAPPIRQAVDATVVLSALLLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
GIAVASVRLYRVDRRLAFWVLFFWVGLLPVSQIVPVISLLYDHYLYLPIIGAAALAGSGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ALLWERLAPERRFLLYAVVLPVLAALSVASFQRTGVWKNSLTLWSDAVAKEPGSDLAWQI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHH
LGGSLLDVGRIAEAREAYQRGFALNRSNTEILHALGQIATNTGELDQGYRMLKRLLELKP
HCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
DYVSGWASLGTNYMKRGDYGEAERAYQRAHSLQPEAWQVVSLLGNLALTRGRLEEARGYF
HHHHHHHHHCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
VQVEAQAPGDAANAYALASVEALSGNADAGLAWLEKAVQRGYDDFGRMYDDPRLSALRDS
EEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHCC
PRFDRLVRNNAGR
HHHHHHHHCCCCC
>Mature Secondary Structure
MNFFSLKREQALDFVCLAVVVLAVYGRALGHDFQTNWDDNWYVLYNEAVRGFSWDHIRSA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHCCCCHHHHHHH
FTGYFGGYYAPVQVVSYMLDYSLWGLWPGGFILTNILLHLLNGLLIYRLLLGWYGQRLVA
HHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVASAIFLVHPVQVEAVAWISQRKSLLALLFFLIAWKQYCRYRLAPTGRGRWSYGASCGA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHH
FLLSLLAKPTTVVLPVILVLYDHCFADGDRRSRYADKVPYVLLAGIFSALTLYTQSPEVA
HHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCHH
EGGRTAYHGGSPLGTLYTMLPVFCRYLEMLVWPAGLSAAYAPPIRQAVDATVVLSALLLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
GIAVASVRLYRVDRRLAFWVLFFWVGLLPVSQIVPVISLLYDHYLYLPIIGAAALAGSGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ALLWERLAPERRFLLYAVVLPVLAALSVASFQRTGVWKNSLTLWSDAVAKEPGSDLAWQI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHH
LGGSLLDVGRIAEAREAYQRGFALNRSNTEILHALGQIATNTGELDQGYRMLKRLLELKP
HCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
DYVSGWASLGTNYMKRGDYGEAERAYQRAHSLQPEAWQVVSLLGNLALTRGRLEEARGYF
HHHHHHHHHCHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
VQVEAQAPGDAANAYALASVEALSGNADAGLAWLEKAVQRGYDDFGRMYDDPRLSALRDS
EEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHCC
PRFDRLVRNNAGR
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA