| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78221793
Identifier: 78221793
GI number: 78221793
Start: 619357
End: 620679
Strand: Direct
Name: 78221793
Synonym: Gmet_0572
Alternate gene names: NA
Gene position: 619357-620679 (Clockwise)
Preceding gene: 78221792
Following gene: 78221794
Centisome position: 15.49
GC content: 55.93
Gene sequence:
>1323_bases ATGAAACGGTTTCTGCTCTCACGTACTACCATCCTCGCTCTCTTTGCGCTGATCCTTGGCGCGATAGTGCTGTCCTATTT TGTTCCGCAACACATGGGAGTGCCTTCCCGCGCTCTCGATAAGTGGCGGGAGTCCCATGGGCCGCTGCTTGCGGCGGTCG ATTTCCTGGGACTGCACCATATGTTCACGACCCCGTGGTTTGCCACCCTACTTGCGTTTTTTCTGGCTTCCCTTTCCCTG TCAACGTATCAGCAGTACCGTTTGGCAAAAGAGCGGACTTTTCGGGTAGGGCTTCCTGGCGAAGGCTGGATCTCCCTGCC GGAAACAGCGATGGAATCGGCGGTGATTCTGCGGAAATTCGGATATGTGCGGATTGGCAACCAGGGAGAAGTGTCCCGGC ATGTCAAACACCCCTGGGGGTATTGGGGCAACTTTCTGCTGCACGTCGGCATTGTGCTCGTGGTGGCCTCGTCGCTGGTT ATCCTGGTAACCCAGCATCGTGGGCTTCTCAATCTTGAGAGGGGCGAAACCGTTTATCCCGGTACGCCATGGGCCGTTGA GGAAAATGGTCTGTTTGTCGGAAAGTTTGTGCTTCCGGCAGCCGTCCGGCTTGAGTCCCACGATCCGGTATTCTGGGATA ACGGCGAGATCAAGTTGATTGAATCTACCGTTGCGTTCCTGTATCCGGACCGGCCCGTGGAACGCGCTACACTCGGAATC AATCAGCCTGCCTGGCTCGGCGGCGTCAAGATCTACCAGAGTCACAGGTTCGGCAGCGACTTCTATGCTGAGTTTGCCGA TAGAGACGGCAAGAAAGTTGTGCTCATACTTCCCCTGCAAATCCCACCGCGGCTCGACGAGGCAGGCTATGGAGATTTTC AGTTCAACGTGATGCCCTTTCAGATCAAGGCAAAATATTATGCCGATGCTGCCCGGAAGGATATGCTGAGCGGCAATCCG CTGCTCGTCCTCCGGTTGTACGATGGTGCCGCGCTCTTGGGAGAACTTCCGCTCCGGATTGGCGAAAGCGGCGTTCTCGG GAACTACCATGTCCGGTTACTCAAAGCCGTGCCATGGAACGGGTTGATACTTGTCTCGATGAGCGGTATGCCAGGCATAT TTTTCGGTTTTTTCATTATTGTATGTGGCTGTTCCCTCAATTACTTCGTCGTGCCGCGGGAGGTGTGGGTGAGGGAGGGA TCACAAACAGCGGTTTCCTGGCGGGCTGCACGCTTTGCCGAATTCTACCGTGACGAATATGACGAGCTTGTGGCGGCCTT GGGCGCTATGCACGAGCAAGCCGAAGCCGGGCCGGTTCAGTGA
Upstream 100 bases:
>100_bases TACCGAGAACGGCTGCACCACCGCCGGGGTATGCGGCAACCAGCATTCAGGGGCCGGTCAGAAATGGTGATAGTCTAGGT TTGCGACGTACCTCAAGGCG
Downstream 100 bases:
>100_bases ATTGGATTACGTCTTCACAAGAGGGCTTGAACGAAGGGAACGGTTGCCATGTTCAATGGGAATGATCCGGTTATCATAGA TGTTTCAGTCCACTGGATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MKRFLLSRTTILALFALILGAIVLSYFVPQHMGVPSRALDKWRESHGPLLAAVDFLGLHHMFTTPWFATLLAFFLASLSL STYQQYRLAKERTFRVGLPGEGWISLPETAMESAVILRKFGYVRIGNQGEVSRHVKHPWGYWGNFLLHVGIVLVVASSLV ILVTQHRGLLNLERGETVYPGTPWAVEENGLFVGKFVLPAAVRLESHDPVFWDNGEIKLIESTVAFLYPDRPVERATLGI NQPAWLGGVKIYQSHRFGSDFYAEFADRDGKKVVLILPLQIPPRLDEAGYGDFQFNVMPFQIKAKYYADAARKDMLSGNP LLVLRLYDGAALLGELPLRIGESGVLGNYHVRLLKAVPWNGLILVSMSGMPGIFFGFFIIVCGCSLNYFVVPREVWVREG SQTAVSWRAARFAEFYRDEYDELVAALGAMHEQAEAGPVQ
Sequences:
>Translated_440_residues MKRFLLSRTTILALFALILGAIVLSYFVPQHMGVPSRALDKWRESHGPLLAAVDFLGLHHMFTTPWFATLLAFFLASLSL STYQQYRLAKERTFRVGLPGEGWISLPETAMESAVILRKFGYVRIGNQGEVSRHVKHPWGYWGNFLLHVGIVLVVASSLV ILVTQHRGLLNLERGETVYPGTPWAVEENGLFVGKFVLPAAVRLESHDPVFWDNGEIKLIESTVAFLYPDRPVERATLGI NQPAWLGGVKIYQSHRFGSDFYAEFADRDGKKVVLILPLQIPPRLDEAGYGDFQFNVMPFQIKAKYYADAARKDMLSGNP LLVLRLYDGAALLGELPLRIGESGVLGNYHVRLLKAVPWNGLILVSMSGMPGIFFGFFIIVCGCSLNYFVVPREVWVREG SQTAVSWRAARFAEFYRDEYDELVAALGAMHEQAEAGPVQ >Mature_440_residues MKRFLLSRTTILALFALILGAIVLSYFVPQHMGVPSRALDKWRESHGPLLAAVDFLGLHHMFTTPWFATLLAFFLASLSL STYQQYRLAKERTFRVGLPGEGWISLPETAMESAVILRKFGYVRIGNQGEVSRHVKHPWGYWGNFLLHVGIVLVVASSLV ILVTQHRGLLNLERGETVYPGTPWAVEENGLFVGKFVLPAAVRLESHDPVFWDNGEIKLIESTVAFLYPDRPVERATLGI NQPAWLGGVKIYQSHRFGSDFYAEFADRDGKKVVLILPLQIPPRLDEAGYGDFQFNVMPFQIKAKYYADAARKDMLSGNP LLVLRLYDGAALLGELPLRIGESGVLGNYHVRLLKAVPWNGLILVSMSGMPGIFFGFFIIVCGCSLNYFVVPREVWVREG SQTAVSWRAARFAEFYRDEYDELVAALGAMHEQAEAGPVQ
Specific function: Unknown
COG id: COG1333
COG function: function code O; ResB protein required for cytochrome c biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49292; Mature: 49292
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFLLSRTTILALFALILGAIVLSYFVPQHMGVPSRALDKWRESHGPLLAAVDFLGLHH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEHHHHHHHHH MFTTPWFATLLAFFLASLSLSTYQQYRLAKERTFRVGLPGEGWISLPETAMESAVILRKF HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHC GYVRIGNQGEVSRHVKHPWGYWGNFLLHVGIVLVVASSLVILVTQHRGLLNLERGETVYP CEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEECCCCEECC GTPWAVEENGLFVGKFVLPAAVRLESHDPVFWDNGEIKLIESTVAFLYPDRPVERATLGI CCCCEEECCCEEEEHHHCCHHEEECCCCCEEECCCCEEEEEEEEHEECCCCCCCHHEECC NQPAWLGGVKIYQSHRFGSDFYAEFADRDGKKVVLILPLQIPPRLDEAGYGDFQFNVMPF CCCCHHCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEE QIKAKYYADAARKDMLSGNPLLVLRLYDGAALLGELPLRIGESGVLGNYHVRLLKAVPWN EEEEHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCCHHCCCCCCCCCCEEEEEEECCCC GLILVSMSGMPGIFFGFFIIVCGCSLNYFVVPREVWVREGSQTAVSWRAARFAEFYRDEY CEEEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHH DELVAALGAMHEQAEAGPVQ HHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKRFLLSRTTILALFALILGAIVLSYFVPQHMGVPSRALDKWRESHGPLLAAVDFLGLHH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEHHHHHHHHH MFTTPWFATLLAFFLASLSLSTYQQYRLAKERTFRVGLPGEGWISLPETAMESAVILRKF HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCHHHHHHHHHHHHC GYVRIGNQGEVSRHVKHPWGYWGNFLLHVGIVLVVASSLVILVTQHRGLLNLERGETVYP CEEEECCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEECCCCEECC GTPWAVEENGLFVGKFVLPAAVRLESHDPVFWDNGEIKLIESTVAFLYPDRPVERATLGI CCCCEEECCCEEEEHHHCCHHEEECCCCCEEECCCCEEEEEEEEHEECCCCCCCHHEECC NQPAWLGGVKIYQSHRFGSDFYAEFADRDGKKVVLILPLQIPPRLDEAGYGDFQFNVMPF CCCCHHCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEE QIKAKYYADAARKDMLSGNPLLVLRLYDGAALLGELPLRIGESGVLGNYHVRLLKAVPWN EEEEHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCCHHCCCCCCCCCCEEEEEEECCCC GLILVSMSGMPGIFFGFFIIVCGCSLNYFVVPREVWVREGSQTAVSWRAARFAEFYRDEY CEEEEEECCCCHHHHHHHHHHHCCCCCEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHH DELVAALGAMHEQAEAGPVQ HHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA