| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221758
Identifier: 78221758
GI number: 78221758
Start: 577213
End: 578457
Strand: Direct
Name: 78221758
Synonym: Gmet_0537
Alternate gene names: NA
Gene position: 577213-578457 (Clockwise)
Preceding gene: 78221757
Following gene: 78221759
Centisome position: 14.44
GC content: 66.99
Gene sequence:
>1245_bases ATGCACTTCATCGCCGTATTCTGGCTGGCGGCGGCACTCGCGTCGCCCGCTGACGGCGCCGAGAACTGCCGGGCCTGCCA CCGGGACGCTGTTTCCGGTCCCCATGCCGCCATCGGCTGTACCCCCTGTCACGGGGACGACCGTTCCACGGTGGGGAATC CGGCCACCGCGGTTGACCGGGCCGCCCGTTGCGTCGCCTGCCACCGGGGCTTCGACCGGCTGTTCGATCACGCCATGGCG ACCCGGACGGCGGAACGGCAGTTCGTGGCCAGAACCGTGGGGCGGTTCGATGGAGGATTCTGGGCCGACAACTGCACCGG CTGCCACGTTCGTGGCTGTCTCGACTGCCACGGCGGCAAGGGGCACGCCATGTCCCGACCCCGCGACGGCGTCTGTCTTG ACTGTCACCGTGGCTATTTTGTGGGAAGCGACTACCACGGCCGGGCCCCCAGGGAGGACGCTTTCCGCTTCCAGCGGGGC CCCTTTGCCGGTGGAGAACAGTTTCTACCCATGCTTCCCGATGTCCATGCCGAGGCCGGCATCGGCTGCGGCGGCTGCCA CGACATGGCGAGCCTGGCCGCCGGCAGGCGGAGCGGCAAGGGATGCCGCGACTGCCACGAACCCGACCAGAGGATAGTGG AGCACCGCATCCCTGCCCACAGGGAGCGGCTCGAATGCTACGCCTGCCACTCGGCCTGGGCGCCCCAGGAGTACGGCACC TTCTGGCTCCGCTTCATCGACAGCCCCCGCCGCCAGGCGCGGTTCACGGCCATCCCCCATCAGGATGAGTGGGTAAAGAG CGCCTATCTCAAGCGGCAGGATGCCCCTCCCTTGGGGCTGAACAGTGCGGGGAAGGTGAGCCCCATTCGGCCGCAGTTCA TCCTCTATTTTTCAGATATCCGGAGCGAACGGGCGGTGGGGGAGGAGAACCGGCTCCTGGCCGCGGAGTGGAAGGCATTC TTCCCCCATACGGTCCGGCGGGGCACCGTCATGTGCGACGGCTGCCACGACAATCCGCGCCGCTTCCTCCTGGAGGGGGA AAAGGAGCGGATTTACCGGCTGAAGGATGATGGCTTGTCCCTGGAATCCTTCTGGCGCCGGGAGGGGCAGCGGGTGGTGA ACGGGAGTTTCATGGACCCTGAACGGGTCAGGAAGATGGCCGTGAGGACACCGGCGTACACGAAGGGATATATCGAGAAA TGGCAGCGGTTGACCGGGGACGCCGGCACTTCATCGCGGCGCTGA
Upstream 100 bases:
>100_bases GAGGTTATGAAGGTATGGCGGGCAAACCTCTGCATTGTCTGCCACACCCGTCCCGACGACCCCATTTACCGCAAGGAGCT CGACTATCGTGCCCTGGATG
Downstream 100 bases:
>100_bases TTGCGTTCATCGCTTCTTTAGCGGCGGCATGGCGGTTTCTTGTCCCCAAAAGGAGGGAATCCGGGGAGCGCTTCGTCATT GACATGGCGGCCGTTCCGCC
Product: cytochrome c family protein
Products: NA
Alternate protein names: Cytochrome C; Multiheme C-Type Cytochrome
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MHFIAVFWLAAALASPADGAENCRACHRDAVSGPHAAIGCTPCHGDDRSTVGNPATAVDRAARCVACHRGFDRLFDHAMA TRTAERQFVARTVGRFDGGFWADNCTGCHVRGCLDCHGGKGHAMSRPRDGVCLDCHRGYFVGSDYHGRAPREDAFRFQRG PFAGGEQFLPMLPDVHAEAGIGCGGCHDMASLAAGRRSGKGCRDCHEPDQRIVEHRIPAHRERLECYACHSAWAPQEYGT FWLRFIDSPRRQARFTAIPHQDEWVKSAYLKRQDAPPLGLNSAGKVSPIRPQFILYFSDIRSERAVGEENRLLAAEWKAF FPHTVRRGTVMCDGCHDNPRRFLLEGEKERIYRLKDDGLSLESFWRREGQRVVNGSFMDPERVRKMAVRTPAYTKGYIEK WQRLTGDAGTSSRR
Sequences:
>Translated_414_residues MHFIAVFWLAAALASPADGAENCRACHRDAVSGPHAAIGCTPCHGDDRSTVGNPATAVDRAARCVACHRGFDRLFDHAMA TRTAERQFVARTVGRFDGGFWADNCTGCHVRGCLDCHGGKGHAMSRPRDGVCLDCHRGYFVGSDYHGRAPREDAFRFQRG PFAGGEQFLPMLPDVHAEAGIGCGGCHDMASLAAGRRSGKGCRDCHEPDQRIVEHRIPAHRERLECYACHSAWAPQEYGT FWLRFIDSPRRQARFTAIPHQDEWVKSAYLKRQDAPPLGLNSAGKVSPIRPQFILYFSDIRSERAVGEENRLLAAEWKAF FPHTVRRGTVMCDGCHDNPRRFLLEGEKERIYRLKDDGLSLESFWRREGQRVVNGSFMDPERVRKMAVRTPAYTKGYIEK WQRLTGDAGTSSRR >Mature_414_residues MHFIAVFWLAAALASPADGAENCRACHRDAVSGPHAAIGCTPCHGDDRSTVGNPATAVDRAARCVACHRGFDRLFDHAMA TRTAERQFVARTVGRFDGGFWADNCTGCHVRGCLDCHGGKGHAMSRPRDGVCLDCHRGYFVGSDYHGRAPREDAFRFQRG PFAGGEQFLPMLPDVHAEAGIGCGGCHDMASLAAGRRSGKGCRDCHEPDQRIVEHRIPAHRERLECYACHSAWAPQEYGT FWLRFIDSPRRQARFTAIPHQDEWVKSAYLKRQDAPPLGLNSAGKVSPIRPQFILYFSDIRSERAVGEENRLLAAEWKAF FPHTVRRGTVMCDGCHDNPRRFLLEGEKERIYRLKDDGLSLESFWRREGQRVVNGSFMDPERVRKMAVRTPAYTKGYIEK WQRLTGDAGTSSRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46406; Mature: 46406
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFIAVFWLAAALASPADGAENCRACHRDAVSGPHAAIGCTPCHGDDRSTVGNPATAVDR CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHH AARCVACHRGFDRLFDHAMATRTAERQFVARTVGRFDGGFWADNCTGCHVRGCLDCHGGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEECEEECCCCC GHAMSRPRDGVCLDCHRGYFVGSDYHGRAPREDAFRFQRGPFAGGEQFLPMLPDVHAEAG CCCCCCCCCCEEEECCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHCC IGCGGCHDMASLAAGRRSGKGCRDCHEPDQRIVEHRIPAHRERLECYACHSAWAPQEYGT CCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHH FWLRFIDSPRRQARFTAIPHQDEWVKSAYLKRQDAPPLGLNSAGKVSPIRPQFILYFSDI HHHHHHCCHHHHCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHH RSERAVGEENRLLAAEWKAFFPHTVRRGTVMCDGCHDNPRRFLLEGEKERIYRLKDDGLS HHHHHCCCCCCEEHHHHHHHCCHHHCCCCEEEECCCCCCHHEEEECCHHHEEEECCCCCC LESFWRREGQRVVNGSFMDPERVRKMAVRTPAYTKGYIEKWQRLTGDAGTSSRR HHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MHFIAVFWLAAALASPADGAENCRACHRDAVSGPHAAIGCTPCHGDDRSTVGNPATAVDR CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHH AARCVACHRGFDRLFDHAMATRTAERQFVARTVGRFDGGFWADNCTGCHVRGCLDCHGGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEECEEECCCCC GHAMSRPRDGVCLDCHRGYFVGSDYHGRAPREDAFRFQRGPFAGGEQFLPMLPDVHAEAG CCCCCCCCCCEEEECCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHCC IGCGGCHDMASLAAGRRSGKGCRDCHEPDQRIVEHRIPAHRERLECYACHSAWAPQEYGT CCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHH FWLRFIDSPRRQARFTAIPHQDEWVKSAYLKRQDAPPLGLNSAGKVSPIRPQFILYFSDI HHHHHHCCHHHHCEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHH RSERAVGEENRLLAAEWKAFFPHTVRRGTVMCDGCHDNPRRFLLEGEKERIYRLKDDGLS HHHHHCCCCCCEEHHHHHHHCCHHHCCCCEEEECCCCCCHHEEEECCHHHEEEECCCCCC LESFWRREGQRVVNGSFMDPERVRKMAVRTPAYTKGYIEKWQRLTGDAGTSSRR HHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA