| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221757
Identifier: 78221757
GI number: 78221757
Start: 575370
End: 577265
Strand: Direct
Name: 78221757
Synonym: Gmet_0536
Alternate gene names: NA
Gene position: 575370-577265 (Clockwise)
Preceding gene: 78221756
Following gene: 78221758
Centisome position: 14.39
GC content: 62.76
Gene sequence:
>1896_bases ATGACGTACCTTTCCTTTCTGATAGATTCTCTTCCCCTGCTTCGGCGTTTGGCCACGTTCGCGCTGCTTCCGCTCGCCCT GCTGCTTTCAGGCTGCAATGGGGGTGGGGGAGAAAACGGCTCGTGCCTCTCATGCCACCGGGGTATCGAGCATGCTTCTC CTGCCCATCCCCGCTGCGTTTCCTGCCACGGAGGCAATGAACGGGGCAGGGACAAGGAATCCGCCCACCGGGGCATGTTC GCCCTCCGCAATCCGTCGGATCCCCGCTCCTGGGAGCATAGCTGCGGTGCCTGCCACCCTTGGCAGCTTGCCCGGGTGAA GGGGAGTCTCATGCAGACCAACACCGGGATGATTAAGAACATCCAGCTAACCTGGGAGGGGGAGGACGGAAAGCTCTACG GCAGCCGACGCGAGGATGTCTACTCCCCTGATGGCAAAGAACGGCAGCTTGCCGCGGTGACGGAGCTGGACAATATCTCC GGAGAGCTCTACCGCAAGTTCTGCTCCCTCTGCCATGTCGGCATTGAAAACCGTTACGCCTACGATGTGGGGCATTCGGC GGGGTGTGCCGCCTGCCACTTTCCCTGGAACGATACCGGCACCTATGCCGGCGGCGACCTGACCATGAAGGGGCGGGGGC CGGCCTCGGCTTCCCATGGGATGACGGGGCTTCCGGGCAACGACGTCTGCTTTCGGTGCCATAACCGGAGCGGCCGCATC GCCCTGTCGTACATGGGGCTCAACGACGGCAACACCGCCCAGGTGCCGACGCGAAACGGGTTTCCCGGACCGCTTCTCAC CAGCGGGAGCCGGAGCGTCACCCGCATCACGCCGGACATCCACTATGCCATGGGGATGGACTGCATCGACTGCCATACTT CCCGCGACATCATGGGTGACGGATACGCCTACGAGAACCTCTACCACCAGGTGGAGATCCGCTGCGAGGATTGCCACGGC AGCGGCACCGAGCTTCCCCGCTGGCGGGAAATCGTCCGGGAGAACGAAGCCCCGGTGCGCGAGTCGCGGCAGTACCGGCG GCAGATGCGCCCCGGCATGCGGATGATCGTCACCGGCAAGGGGCGCCCCTACTCGAACGTTTTCTACGAAAACGGACTGG TACGGCTTGTCGGCAAACGGAGCGGCCGCCTCTATACCAGCAAGGTGATTACCGGCACCCCGGCCCATACCGTAGCCGGC CACGGCAGGCTGGAGTGCTACAGTTGCCACTCCCGCGCGGTGGTCCAGTGTTACGGCTGCCATACCAACTACGACAAGTC CAGGACCGGCCGCGATTTTGTAAAGGATATGGATACCCTGGGGCTCTTTACCGAGTCCGAGGACTACCGGATGCTCTACC CGTTCCCCCTGGCCCTCAACCAGCGGGGTAAAATATCGCCGGTCACCCCCGGTTGCCAGACCTTCGTGACCGTCACCGAG GTGGACGGGCGCGTGTCCAAAGAGGGGTATGTGACAACCTTCAAGGGTAAGCAGCAGCTGCGCTTTGCCCCCTTCTACTC CCACAACACCGGTGTGAAGGCCATCGGCTGCGGTGAGTGCCACGCAAACCCCGCCTTCCTGGGGTTCGGCCAGCATGAGG TGGAGGGGAGAAATATCGCTGCAACCATGCTCTGCCCCAAAAACGAGGAGAAGCCCCTGGACGGCTTCCAGACCATGGAG GGGGGGAAGGTGCGGGCTTTCTCGGCCGTTACCAGGGAAAATTCCCGCCCGCTTAACGAAGCGGAGGTTATGAAGGTATG GCGGGCAAACCTCTGCATTGTCTGCCACACCCGTCCCGACGACCCCATTTACCGCAAGGAGCTCGACTATCGTGCCCTGG ATGATGCACTTCATCGCCGTATTCTGGCTGGCGGCGGCACTCGCGTCGCCCGCTGA
Upstream 100 bases:
>100_bases GAAATAGCAGTATCACGCTTGACCTCCTTCTCTGTTATGGGCCGGCAGGGTCACCTGCCGGCTTTTTTTTCACGGGTCAT TGCGCTATGATAGGCGCCAG
Downstream 100 bases:
>100_bases CGGCGCCGAGAACTGCCGGGCCTGCCACCGGGACGCTGTTTCCGGTCCCCATGCCGCCATCGGCTGTACCCCCTGTCACG GGGACGACCGTTCCACGGTG
Product: cytochrome c family protein
Products: NA
Alternate protein names: Lipoprotein Cytochrome C; Multiheme C-Type Cytochrome
Number of amino acids: Translated: 631; Mature: 630
Protein sequence:
>631_residues MTYLSFLIDSLPLLRRLATFALLPLALLLSGCNGGGGENGSCLSCHRGIEHASPAHPRCVSCHGGNERGRDKESAHRGMF ALRNPSDPRSWEHSCGACHPWQLARVKGSLMQTNTGMIKNIQLTWEGEDGKLYGSRREDVYSPDGKERQLAAVTELDNIS GELYRKFCSLCHVGIENRYAYDVGHSAGCAACHFPWNDTGTYAGGDLTMKGRGPASASHGMTGLPGNDVCFRCHNRSGRI ALSYMGLNDGNTAQVPTRNGFPGPLLTSGSRSVTRITPDIHYAMGMDCIDCHTSRDIMGDGYAYENLYHQVEIRCEDCHG SGTELPRWREIVRENEAPVRESRQYRRQMRPGMRMIVTGKGRPYSNVFYENGLVRLVGKRSGRLYTSKVITGTPAHTVAG HGRLECYSCHSRAVVQCYGCHTNYDKSRTGRDFVKDMDTLGLFTESEDYRMLYPFPLALNQRGKISPVTPGCQTFVTVTE VDGRVSKEGYVTTFKGKQQLRFAPFYSHNTGVKAIGCGECHANPAFLGFGQHEVEGRNIAATMLCPKNEEKPLDGFQTME GGKVRAFSAVTRENSRPLNEAEVMKVWRANLCIVCHTRPDDPIYRKELDYRALDDALHRRILAGGGTRVAR
Sequences:
>Translated_631_residues MTYLSFLIDSLPLLRRLATFALLPLALLLSGCNGGGGENGSCLSCHRGIEHASPAHPRCVSCHGGNERGRDKESAHRGMF ALRNPSDPRSWEHSCGACHPWQLARVKGSLMQTNTGMIKNIQLTWEGEDGKLYGSRREDVYSPDGKERQLAAVTELDNIS GELYRKFCSLCHVGIENRYAYDVGHSAGCAACHFPWNDTGTYAGGDLTMKGRGPASASHGMTGLPGNDVCFRCHNRSGRI ALSYMGLNDGNTAQVPTRNGFPGPLLTSGSRSVTRITPDIHYAMGMDCIDCHTSRDIMGDGYAYENLYHQVEIRCEDCHG SGTELPRWREIVRENEAPVRESRQYRRQMRPGMRMIVTGKGRPYSNVFYENGLVRLVGKRSGRLYTSKVITGTPAHTVAG HGRLECYSCHSRAVVQCYGCHTNYDKSRTGRDFVKDMDTLGLFTESEDYRMLYPFPLALNQRGKISPVTPGCQTFVTVTE VDGRVSKEGYVTTFKGKQQLRFAPFYSHNTGVKAIGCGECHANPAFLGFGQHEVEGRNIAATMLCPKNEEKPLDGFQTME GGKVRAFSAVTRENSRPLNEAEVMKVWRANLCIVCHTRPDDPIYRKELDYRALDDALHRRILAGGGTRVAR >Mature_630_residues TYLSFLIDSLPLLRRLATFALLPLALLLSGCNGGGGENGSCLSCHRGIEHASPAHPRCVSCHGGNERGRDKESAHRGMFA LRNPSDPRSWEHSCGACHPWQLARVKGSLMQTNTGMIKNIQLTWEGEDGKLYGSRREDVYSPDGKERQLAAVTELDNISG ELYRKFCSLCHVGIENRYAYDVGHSAGCAACHFPWNDTGTYAGGDLTMKGRGPASASHGMTGLPGNDVCFRCHNRSGRIA LSYMGLNDGNTAQVPTRNGFPGPLLTSGSRSVTRITPDIHYAMGMDCIDCHTSRDIMGDGYAYENLYHQVEIRCEDCHGS GTELPRWREIVRENEAPVRESRQYRRQMRPGMRMIVTGKGRPYSNVFYENGLVRLVGKRSGRLYTSKVITGTPAHTVAGH GRLECYSCHSRAVVQCYGCHTNYDKSRTGRDFVKDMDTLGLFTESEDYRMLYPFPLALNQRGKISPVTPGCQTFVTVTEV DGRVSKEGYVTTFKGKQQLRFAPFYSHNTGVKAIGCGECHANPAFLGFGQHEVEGRNIAATMLCPKNEEKPLDGFQTMEG GKVRAFSAVTRENSRPLNEAEVMKVWRANLCIVCHTRPDDPIYRKELDYRALDDALHRRILAGGGTRVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69960; Mature: 69829
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYLSFLIDSLPLLRRLATFALLPLALLLSGCNGGGGENGSCLSCHRGIEHASPAHPRCV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHCCCCCCCCCCCCEE SCHGGNERGRDKESAHRGMFALRNPSDPRSWEHSCGACHPWQLARVKGSLMQTNTGMIKN EECCCCCCCCCHHHHHCCEEEECCCCCCCCHHCCCCCCCCHHHHHHHCHHEECCCCEEEE IQLTWEGEDGKLYGSRREDVYSPDGKERQLAAVTELDNISGELYRKFCSLCHVGIENRYA EEEEEECCCCCEECCCCCCCCCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHCCCCCEE YDVGHSAGCAACHFPWNDTGTYAGGDLTMKGRGPASASHGMTGLPGNDVCFRCHNRSGRI EECCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCE ALSYMGLNDGNTAQVPTRNGFPGPLLTSGSRSVTRITPDIHYAMGMDCIDCHTSRDIMGD EEEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCEECCCCCCCCCC GYAYENLYHQVEIRCEDCHGSGTELPRWREIVRENEAPVRESRQYRRQMRPGMRMIVTGK CCHHHCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECC GRPYSNVFYENGLVRLVGKRSGRLYTSKVITGTPAHTVAGHGRLECYSCHSRAVVQCYGC CCCCCCHHHCCCEEEEEECCCCCEEEEEEEECCCCHHCCCCCCEEEEECCCCEEEEEEEC HTNYDKSRTGRDFVKDMDTLGLFTESEDYRMLYPFPLALNQRGKISPVTPGCQTFVTVTE CCCCCCCCCCHHHHHHHHHHCEEECCCCCEEEEECCEEECCCCCCCCCCCCCCEEEEEEE VDGRVSKEGYVTTFKGKQQLRFAPFYSHNTGVKAIGCGECHANPAFLGFGQHEVEGRNIA CCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEECCCCCCCCCEEECCCCCCCCCCEE ATMLCPKNEEKPLDGFQTMEGGKVRAFSAVTRENSRPLNEAEVMKVWRANLCIVCHTRPD EEEECCCCCCCCCCCHHCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCC DPIYRKELDYRALDDALHRRILAGGGTRVAR CCHHHHHCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TYLSFLIDSLPLLRRLATFALLPLALLLSGCNGGGGENGSCLSCHRGIEHASPAHPRCV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHCCCCCCCCCCCCEE SCHGGNERGRDKESAHRGMFALRNPSDPRSWEHSCGACHPWQLARVKGSLMQTNTGMIKN EECCCCCCCCCHHHHHCCEEEECCCCCCCCHHCCCCCCCCHHHHHHHCHHEECCCCEEEE IQLTWEGEDGKLYGSRREDVYSPDGKERQLAAVTELDNISGELYRKFCSLCHVGIENRYA EEEEEECCCCCEECCCCCCCCCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHCCCCCEE YDVGHSAGCAACHFPWNDTGTYAGGDLTMKGRGPASASHGMTGLPGNDVCFRCHNRSGRI EECCCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCE ALSYMGLNDGNTAQVPTRNGFPGPLLTSGSRSVTRITPDIHYAMGMDCIDCHTSRDIMGD EEEEEECCCCCCEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCEECCCCCCCCCC GYAYENLYHQVEIRCEDCHGSGTELPRWREIVRENEAPVRESRQYRRQMRPGMRMIVTGK CCHHHCEEEEEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECC GRPYSNVFYENGLVRLVGKRSGRLYTSKVITGTPAHTVAGHGRLECYSCHSRAVVQCYGC CCCCCCHHHCCCEEEEEECCCCCEEEEEEEECCCCHHCCCCCCEEEEECCCCEEEEEEEC HTNYDKSRTGRDFVKDMDTLGLFTESEDYRMLYPFPLALNQRGKISPVTPGCQTFVTVTE CCCCCCCCCCHHHHHHHHHHCEEECCCCCEEEEECCEEECCCCCCCCCCCCCCEEEEEEE VDGRVSKEGYVTTFKGKQQLRFAPFYSHNTGVKAIGCGECHANPAFLGFGQHEVEGRNIA CCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEECCCCCCCCCEEECCCCCCCCCCEE ATMLCPKNEEKPLDGFQTMEGGKVRAFSAVTRENSRPLNEAEVMKVWRANLCIVCHTRPD EEEECCCCCCCCCCCHHCCCCCCEEEEEHHHCCCCCCCCHHHHHHHHCCCEEEEEECCCC DPIYRKELDYRALDDALHRRILAGGGTRVAR CCHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA