Click here to switch to the map view.

The map label for this gene is 78221726

Identifier: 78221726

GI number: 78221726

Start: 548719

End: 549129

Strand: Direct

Name: 78221726

Synonym: Gmet_0505

Alternate gene names: NA

Gene position: 548719-549129 (Clockwise)

Preceding gene: 78221725

Following gene: 78221727

Centisome position: 13.73

GC content: 60.58

Gene sequence:

>411_bases
ATGCGTATCCAGCGAGTTGCATCGTTTTTCCTAATGCTTCTTTTTCTTGCCGGCTGCCGCAACACCTATCTGGTGGCGCA
GCGGTTCGAAGACAGCTCCCGGGAATACGACCGGCTGGTGCGCTGGCAGGAGCATGAAAATGCCTGCATGAGTTTCGCGG
CTTCCACTGTCGCCGATGAATGCCTCGCCCGGGCCAAGGCGGCCAAGGGGGTCTCCATGGCCGATTACCGGGTGAAGAGG
GTGGATATGGATCCGGAGAAGGGGACGGCGACGGTGAGGGTGGAGATCGACTACTACATTCTTCCGTCCACCCGGCTCAA
GACCCTGGAGGACGTCCAGCAGTGGCGCTACGAGGAGATCGACGGGAAGGAGCGCTGGCGCATCGTGACGCCGCTTCCCG
AGTTCAAGTGA

Upstream 100 bases:

>100_bases
CTCATGCCCCCTTTCGGCCGTTACGAGATCGCCGTTGAACTGGTGCGGCACATCAAGGGGAAATAAACGGTTTCCCTTGT
TGTCACCACAGGAGGTACCC

Downstream 100 bases:

>100_bases
TTCGTATCATCGCGGTGTTTCAATGTGGGCAATAATGTGGTAAACAGTAAGGACTACCAGGCGTAATGCCAGACACCAAA
GGAGCGCACCGTATGTCAGA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRIQRVASFFLMLLFLAGCRNTYLVAQRFEDSSREYDRLVRWQEHENACMSFAASTVADECLARAKAAKGVSMADYRVKR
VDMDPEKGTATVRVEIDYYILPSTRLKTLEDVQQWRYEEIDGKERWRIVTPLPEFK

Sequences:

>Translated_136_residues
MRIQRVASFFLMLLFLAGCRNTYLVAQRFEDSSREYDRLVRWQEHENACMSFAASTVADECLARAKAAKGVSMADYRVKR
VDMDPEKGTATVRVEIDYYILPSTRLKTLEDVQQWRYEEIDGKERWRIVTPLPEFK
>Mature_136_residues
MRIQRVASFFLMLLFLAGCRNTYLVAQRFEDSSREYDRLVRWQEHENACMSFAASTVADECLARAKAAKGVSMADYRVKR
VDMDPEKGTATVRVEIDYYILPSTRLKTLEDVQQWRYEEIDGKERWRIVTPLPEFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15995; Mature: 15995

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIQRVASFFLMLLFLAGCRNTYLVAQRFEDSSREYDRLVRWQEHENACMSFAASTVADE
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLARAKAAKGVSMADYRVKRVDMDPEKGTATVRVEIDYYILPSTRLKTLEDVQQWRYEEI
HHHHHHHHCCCCHHHHEEEECCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHCC
DGKERWRIVTPLPEFK
CCCCCEEEECCCCCCC
>Mature Secondary Structure
MRIQRVASFFLMLLFLAGCRNTYLVAQRFEDSSREYDRLVRWQEHENACMSFAASTVADE
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLARAKAAKGVSMADYRVKRVDMDPEKGTATVRVEIDYYILPSTRLKTLEDVQQWRYEEI
HHHHHHHHCCCCHHHHEEEECCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHCC
DGKERWRIVTPLPEFK
CCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA