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The map label for this gene is 78221679

Identifier: 78221679

GI number: 78221679

Start: 506787

End: 507815

Strand: Reverse

Name: 78221679

Synonym: Gmet_0458

Alternate gene names: NA

Gene position: 507815-506787 (Counterclockwise)

Preceding gene: 78221681

Following gene: 78221678

Centisome position: 12.7

GC content: 56.95

Gene sequence:

>1029_bases
ATGCTTACAGGAAAATCCATTCTCGTTACCGGGGGCACCGGATCATTCGGCAAGAAATTCATCGAGACAATCCTCACCTC
GTACCCCGAGGTAAAGCGGATCGTGGTCTTCTCCCGGGACGAGCTGAAGCAGTTCGAGATGGCACAGCAGTTTCCGCCCG
ACAGGTACCGTCAGATACGCTACTTCATCGGCGATGTCCGCGACAAGGATCGTCTCTATCGGGCCTTCGAGGGGATCGAC
ATCGTTGTCCACGCCGCAGCCCTTAAGCAGGTGCCCGCCTGCGAATACAACCCCTTCGAGGCCATCAAGACCAACATTCT
CGGCGCCCAGAACATCATCGAAACAGCACTTGAGCAGGGAGTAACGAAGGTTGTAGCGCTGAGCACCGATAAGGCCGCCG
CCCCCATCAACCTCTACGGTGCAACTAAGCTCTGCTCCGATAAACTTTTTGTGGCGGCCAACAATTTCCGGGGGAAAAAC
GAGATCAAATTCTCGGTGGTCCGGTACGGCAACGTAATGGGAAGCAGGGGAAGCGTCATCCCCTTTTTCCTGAAGAGGAA
ACGCGAAGGGGTGCTGCCCGTCACCGACGAACGGATGACCCGCTTCAACATCACCCTTGAAGACGGGGTCAAACTGGTGC
TCAAGGCCCTGGACATCATGTGGGGAGGGGAAATTTTCGTCCCCAAAATCCCGAGCTACCGGATCCTGGACGTGGCCAAG
GCCGTCGACTCCGGTTGCCGGATCGAGATCGTCGGCATCAGGCCGGGGGAAAAGCTGCACGAGGAGATGATCACCACCAC
CGATGCCCTGAACACCATTGAGTTCAAGGACTACTTTGTCATTCTCCCCTCCATGGCGTTGTGGAATACCGAGCAGTTCA
CGAATCATTTCGGCGGGCGTCACTGCGCCGACGGGTTCGCCTACAACAGCGGCACCAACAGCGACTGGCTCAGCGTCGAG
CAGCTGAGGGAGTTGATCTACACCCACCTCAACCCTGACATCAACCGCCGCAAGGACGATTTCGCATGA

Upstream 100 bases:

>100_bases
GTTATTTTGACACACCACTACCGGCACCGTACTTGCAAGACCCCACAACAACCCAACACAGCGTATCTCCCACACGATTA
CAGCAACCAACGGAGCGGAC

Downstream 100 bases:

>100_bases
GAAGCGCTCCGATTCCCTACGGCCGCCAGAGCATCAGTCCCGCCGACATCCAGGCCGTCGTCGACGTTCTCAATTCCGAC
TGGCTCACCCAAGGCCCCAC

Product: polysaccharide biosynthesis protein CapD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MLTGKSILVTGGTGSFGKKFIETILTSYPEVKRIVVFSRDELKQFEMAQQFPPDRYRQIRYFIGDVRDKDRLYRAFEGID
IVVHAAALKQVPACEYNPFEAIKTNILGAQNIIETALEQGVTKVVALSTDKAAAPINLYGATKLCSDKLFVAANNFRGKN
EIKFSVVRYGNVMGSRGSVIPFFLKRKREGVLPVTDERMTRFNITLEDGVKLVLKALDIMWGGEIFVPKIPSYRILDVAK
AVDSGCRIEIVGIRPGEKLHEEMITTTDALNTIEFKDYFVILPSMALWNTEQFTNHFGGRHCADGFAYNSGTNSDWLSVE
QLRELIYTHLNPDINRRKDDFA

Sequences:

>Translated_342_residues
MLTGKSILVTGGTGSFGKKFIETILTSYPEVKRIVVFSRDELKQFEMAQQFPPDRYRQIRYFIGDVRDKDRLYRAFEGID
IVVHAAALKQVPACEYNPFEAIKTNILGAQNIIETALEQGVTKVVALSTDKAAAPINLYGATKLCSDKLFVAANNFRGKN
EIKFSVVRYGNVMGSRGSVIPFFLKRKREGVLPVTDERMTRFNITLEDGVKLVLKALDIMWGGEIFVPKIPSYRILDVAK
AVDSGCRIEIVGIRPGEKLHEEMITTTDALNTIEFKDYFVILPSMALWNTEQFTNHFGGRHCADGFAYNSGTNSDWLSVE
QLRELIYTHLNPDINRRKDDFA
>Mature_342_residues
MLTGKSILVTGGTGSFGKKFIETILTSYPEVKRIVVFSRDELKQFEMAQQFPPDRYRQIRYFIGDVRDKDRLYRAFEGID
IVVHAAALKQVPACEYNPFEAIKTNILGAQNIIETALEQGVTKVVALSTDKAAAPINLYGATKLCSDKLFVAANNFRGKN
EIKFSVVRYGNVMGSRGSVIPFFLKRKREGVLPVTDERMTRFNITLEDGVKLVLKALDIMWGGEIFVPKIPSYRILDVAK
AVDSGCRIEIVGIRPGEKLHEEMITTTDALNTIEFKDYFVILPSMALWNTEQFTNHFGGRHCADGFAYNSGTNSDWLSVE
QLRELIYTHLNPDINRRKDDFA

Specific function: Unknown

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 38610; Mature: 38610

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTGKSILVTGGTGSFGKKFIETILTSYPEVKRIVVFSRDELKQFEMAQQFPPDRYRQIR
CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHH
YFIGDVRDKDRLYRAFEGIDIVVHAAALKQVPACEYNPFEAIKTNILGAQNIIETALEQG
HHHHCCCCHHHHHHHHCCCCEEEEHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCC
VTKVVALSTDKAAAPINLYGATKLCSDKLFVAANNFRGKNEIKFSVVRYGNVMGSRGSVI
CEEEEEEECCCCCCCEEECCCHHHHCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCH
PFFLKRKREGVLPVTDERMTRFNITLEDGVKLVLKALDIMWGGEIFVPKIPSYRILDVAK
HHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
AVDSGCRIEIVGIRPGEKLHEEMITTTDALNTIEFKDYFVILPSMALWNTEQFTNHFGGR
HHCCCCEEEEEEECCCHHHHHHHHHHHHHCCEEEECCEEEEECCHHHCCHHHHHHHCCCC
HCADGFAYNSGTNSDWLSVEQLRELIYTHLNPDINRRKDDFA
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLTGKSILVTGGTGSFGKKFIETILTSYPEVKRIVVFSRDELKQFEMAQQFPPDRYRQIR
CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCCCHHHHHHH
YFIGDVRDKDRLYRAFEGIDIVVHAAALKQVPACEYNPFEAIKTNILGAQNIIETALEQG
HHHHCCCCHHHHHHHHCCCCEEEEHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCC
VTKVVALSTDKAAAPINLYGATKLCSDKLFVAANNFRGKNEIKFSVVRYGNVMGSRGSVI
CEEEEEEECCCCCCCEEECCCHHHHCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCH
PFFLKRKREGVLPVTDERMTRFNITLEDGVKLVLKALDIMWGGEIFVPKIPSYRILDVAK
HHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
AVDSGCRIEIVGIRPGEKLHEEMITTTDALNTIEFKDYFVILPSMALWNTEQFTNHFGGR
HHCCCCEEEEEEECCCHHHHHHHHHHHHHCCEEEECCEEEEECCHHHCCHHHHHHHCCCC
HCADGFAYNSGTNSDWLSVEQLRELIYTHLNPDINRRKDDFA
HHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]