| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is yqhQ [H]
Identifier: 78221600
GI number: 78221600
Start: 423470
End: 424420
Strand: Direct
Name: yqhQ [H]
Synonym: Gmet_0379
Alternate gene names: 78221600
Gene position: 423470-424420 (Clockwise)
Preceding gene: 78221599
Following gene: 78221601
Centisome position: 10.59
GC content: 60.99
Gene sequence:
>951_bases ATGACGAGGTGGTTCCGGTTGCTGCTGGTGCAGTTGCTCATCCTTGCGGAGCGGATCAATGTAGGTGGGCAGGCTGTTCT CGAAGGGGTCATGATGCGAGCGCCCCGTTCCATGGCCATCGCGGTCCGGCGCCCTTCGGGCGAGATAGCCGTCAAGCGGG AGGAGGTCCCCCCACTCTCGGAGCGCTTTCCCATTGTGAAGCTCCCGATCCTCCGGGGAGCGGTTGCCCTCTTTTCCTCT CTCATTATAGGACTCAAGGCACTCAACTTTTCCGCCAACGAGGCGCTGGCCGAAGAGGAAGAGAAGGAGGAACTCTCCTC CTGGGCCATGGGTGGGACCATGGCCGTTGCCCTCGGGTTCGGCGTCCTCCTCTTTTTTGTCCTTCCCCTTTACCTTACCA AACTCCTCGTCCCGGTTATCGGCCAGTCCAACATCATGTTCAACCTGGTGGACGGCATCATCCGCGTGGCGGTTTTTCTC CTCTATATCGTATCCATTTCCCGCATGAAGGACATTCAGCGGGTTTTTGAGTACCACGGCGCCGAGCACAAAACCATCTT TGCCTTCGAAGCAGGAGAGGAGCTTTCGGCCGCCACGGTCCAGAAGTACAGCCGCCTCCATCCCCGTTGCGGCACGAGCT TTCTCCTCATTGTCATGCTGGTGAGTATCGTCATCTTCTCGCTCATTCCCAAGCTCTGGCCCTTCTGGATGAAGGCCGGG GCCCGGGTGGCGCTCCTGCCGGTCATCGCCGGGGTTTCCTACGAGTTCCTCAAGTGGAGCGCCAAGAACGACCGACACCC CCTGGTGCGGCTCATCATCGCCCCCGGCCTGGCGCTCCAGCGGCTCACCACCCGGGAGCCCGACGACAGCCAGGTGGAGG TGGCGATTCGCTCCATGACCGAGGCCCTGGAAGAGAATGGCGGCTACAAGGACGACCGGCTGGTGGTGTGA
Upstream 100 bases:
>100_bases GGGATGCCGGACCCGGCTGCGTTGCCGGCCCCTGTCCGGAAGGGACCATGACCTGCGGTAAGATCGTCGAGGTCAGGAAG AGATTCAAGGAGATGTACGT
Downstream 100 bases:
>100_bases TGTCCCGCCGGCCCTGATTTTCGTTTCTGAAGGATTGCGTTGATGTTCGACAAGATAGAAGAACTTGAAATCCGGTACCA GGAGCTGGAATCGCTCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTRWFRLLLVQLLILAERINVGGQAVLEGVMMRAPRSMAIAVRRPSGEIAVKREEVPPLSERFPIVKLPILRGAVALFSS LIIGLKALNFSANEALAEEEEKEELSSWAMGGTMAVALGFGVLLFFVLPLYLTKLLVPVIGQSNIMFNLVDGIIRVAVFL LYIVSISRMKDIQRVFEYHGAEHKTIFAFEAGEELSAATVQKYSRLHPRCGTSFLLIVMLVSIVIFSLIPKLWPFWMKAG ARVALLPVIAGVSYEFLKWSAKNDRHPLVRLIIAPGLALQRLTTREPDDSQVEVAIRSMTEALEENGGYKDDRLVV
Sequences:
>Translated_316_residues MTRWFRLLLVQLLILAERINVGGQAVLEGVMMRAPRSMAIAVRRPSGEIAVKREEVPPLSERFPIVKLPILRGAVALFSS LIIGLKALNFSANEALAEEEEKEELSSWAMGGTMAVALGFGVLLFFVLPLYLTKLLVPVIGQSNIMFNLVDGIIRVAVFL LYIVSISRMKDIQRVFEYHGAEHKTIFAFEAGEELSAATVQKYSRLHPRCGTSFLLIVMLVSIVIFSLIPKLWPFWMKAG ARVALLPVIAGVSYEFLKWSAKNDRHPLVRLIIAPGLALQRLTTREPDDSQVEVAIRSMTEALEENGGYKDDRLVV >Mature_315_residues TRWFRLLLVQLLILAERINVGGQAVLEGVMMRAPRSMAIAVRRPSGEIAVKREEVPPLSERFPIVKLPILRGAVALFSSL IIGLKALNFSANEALAEEEEKEELSSWAMGGTMAVALGFGVLLFFVLPLYLTKLLVPVIGQSNIMFNLVDGIIRVAVFLL YIVSISRMKDIQRVFEYHGAEHKTIFAFEAGEELSAATVQKYSRLHPRCGTSFLLIVMLVSIVIFSLIPKLWPFWMKAGA RVALLPVIAGVSYEFLKWSAKNDRHPLVRLIIAPGLALQRLTTREPDDSQVEVAIRSMTEALEENGGYKDDRLVV
Specific function: Unknown
COG id: COG3872
COG function: function code R; Predicted metal-dependent enzyme
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010787 - ProDom: PD131510 [H]
Pfam domain/function: PF07136 DUF1385 [H]
EC number: NA
Molecular weight: Translated: 35230; Mature: 35099
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRWFRLLLVQLLILAERINVGGQAVLEGVMMRAPRSMAIAVRRPSGEIAVKREEVPPLS CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCHH ERFPIVKLPILRGAVALFSSLIIGLKALNFSANEALAEEEEKEELSSWAMGGTMAVALGF HCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH GVLLFFVLPLYLTKLLVPVIGQSNIMFNLVDGIIRVAVFLLYIVSISRMKDIQRVFEYHG HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AEHKTIFAFEAGEELSAATVQKYSRLHPRCGTSFLLIVMLVSIVIFSLIPKLWPFWMKAG CCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ARVALLPVIAGVSYEFLKWSAKNDRHPLVRLIIAPGLALQRLTTREPDDSQVEVAIRSMT CCEEHHHHHHCCCHHHHEECCCCCCCHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHH EALEENGGYKDDRLVV HHHHHCCCCCCCCCCC >Mature Secondary Structure TRWFRLLLVQLLILAERINVGGQAVLEGVMMRAPRSMAIAVRRPSGEIAVKREEVPPLS HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCCCCCHH ERFPIVKLPILRGAVALFSSLIIGLKALNFSANEALAEEEEKEELSSWAMGGTMAVALGF HCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHH GVLLFFVLPLYLTKLLVPVIGQSNIMFNLVDGIIRVAVFLLYIVSISRMKDIQRVFEYHG HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AEHKTIFAFEAGEELSAATVQKYSRLHPRCGTSFLLIVMLVSIVIFSLIPKLWPFWMKAG CCCCEEEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC ARVALLPVIAGVSYEFLKWSAKNDRHPLVRLIIAPGLALQRLTTREPDDSQVEVAIRSMT CCEEHHHHHHCCCHHHHEECCCCCCCHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHH EALEENGGYKDDRLVV HHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]