| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221574
Identifier: 78221574
GI number: 78221574
Start: 394129
End: 395175
Strand: Reverse
Name: 78221574
Synonym: Gmet_0353
Alternate gene names: NA
Gene position: 395175-394129 (Counterclockwise)
Preceding gene: 78221579
Following gene: 78221571
Centisome position: 9.89
GC content: 63.61
Gene sequence:
>1047_bases ATGGCAATGAACGGTAGTTCGGGGAAACGGACAGGGACGTGGCGGATACGGGCAGGAGCGGCCATGGCCGGGCTGGCACT GCTGCTCACGGGTACGGTTGCCCGCGGCATGGAAGTCACACCCTTCCGGACAGGGAACATGGCGCCACTCGTGCAAATCC ACGGTCTGCCGGTGCCGGACAGCGCCAGGATCCTGGCGTCGAGGGAAGGCGAGGTTTCCGCCGTGGCCGATCTGTCCAAC AACTACGCCGTGGATTCCAAGGGGAACGAGCACATCATCCTCGACGGCGAGACATACCGGTTCGCCCTCGATCTGCGCTA CGGCCTTGTTCCCGGCGTGGAGGCAGGCATTGAGATTCCCTTCATCGTTCAGTCGGGAGGATTCCTCGACGGCTTCATCG AATGGTTTCACAAGGCCTTCGGCTTCACCAACGGCGGGAGGGAGTACGCTCCCCGGGACCGGCTCCGCTACCGGTACGAC ACGAACGGCACCGATCGGTTCAGGATCGACGACAGCAATGCAGGTATCGGCGATATCCGCCTGACGGGGGGAATCCAACT CTACGATGACGGGGCGACGGCCCCCCGCCGCGTTGCCCTGCGGAGTGCCCTGAAACTCCCCACCGGCGACAGCGACAAAC TGCGGGGAAGCGGCAGCGTCGACTTCGCCCTCTGGCTCGCCGCCAGCGACGATTACCGGCTCGGCGACTGGGGGCACCTG ACCCTCTTTGCCAACGCCGGCGGCACAGTGATGGGGGATGGCGATGTGCTCGGGGACCAGCAGCGGAACCTGGCGGCCAT GGGGACGTTCGGCTTCGGCTGGAGCCCCCTCGACTGGATGGCACTTACGGTTCAGACCACGTGGCATTCCTCCCTCTACG AGGGGAGTGACCTGAGGGAAATCAGCACCAACTCCCTTCTCATGACGGGAGGGTTTTCCTTCGCCTTCACGGAGCGGACC TTCTTCGACATCGCTCTTTCCGAGGATCTGAACGTGAAAACCTCGCCGGACGTGAACTTCCACCTGGCGCTACGGCAGCG GTTTTAA
Upstream 100 bases:
>100_bases TTCACCTTAGCGCAGATGCGCATTTCAGTTCAAGATAGTTATTGAATCTCAGGGACAGGGCAGCCGTGGATATGCCATTG TTCCGCAGGGGGGGCCTGGT
Downstream 100 bases:
>100_bases TTATCTTTGGACTGGCGCCGCTCGTCGCGGATCATGTCGAGGGCGAGGAGCGCCACGCCAACGCAGATGGCGGAGTCGGC CACGTTGAAGGCGGGCCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MAMNGSSGKRTGTWRIRAGAAMAGLALLLTGTVARGMEVTPFRTGNMAPLVQIHGLPVPDSARILASREGEVSAVADLSN NYAVDSKGNEHIILDGETYRFALDLRYGLVPGVEAGIEIPFIVQSGGFLDGFIEWFHKAFGFTNGGREYAPRDRLRYRYD TNGTDRFRIDDSNAGIGDIRLTGGIQLYDDGATAPRRVALRSALKLPTGDSDKLRGSGSVDFALWLAASDDYRLGDWGHL TLFANAGGTVMGDGDVLGDQQRNLAAMGTFGFGWSPLDWMALTVQTTWHSSLYEGSDLREISTNSLLMTGGFSFAFTERT FFDIALSEDLNVKTSPDVNFHLALRQRF
Sequences:
>Translated_348_residues MAMNGSSGKRTGTWRIRAGAAMAGLALLLTGTVARGMEVTPFRTGNMAPLVQIHGLPVPDSARILASREGEVSAVADLSN NYAVDSKGNEHIILDGETYRFALDLRYGLVPGVEAGIEIPFIVQSGGFLDGFIEWFHKAFGFTNGGREYAPRDRLRYRYD TNGTDRFRIDDSNAGIGDIRLTGGIQLYDDGATAPRRVALRSALKLPTGDSDKLRGSGSVDFALWLAASDDYRLGDWGHL TLFANAGGTVMGDGDVLGDQQRNLAAMGTFGFGWSPLDWMALTVQTTWHSSLYEGSDLREISTNSLLMTGGFSFAFTERT FFDIALSEDLNVKTSPDVNFHLALRQRF >Mature_347_residues AMNGSSGKRTGTWRIRAGAAMAGLALLLTGTVARGMEVTPFRTGNMAPLVQIHGLPVPDSARILASREGEVSAVADLSNN YAVDSKGNEHIILDGETYRFALDLRYGLVPGVEAGIEIPFIVQSGGFLDGFIEWFHKAFGFTNGGREYAPRDRLRYRYDT NGTDRFRIDDSNAGIGDIRLTGGIQLYDDGATAPRRVALRSALKLPTGDSDKLRGSGSVDFALWLAASDDYRLGDWGHLT LFANAGGTVMGDGDVLGDQQRNLAAMGTFGFGWSPLDWMALTVQTTWHSSLYEGSDLREISTNSLLMTGGFSFAFTERTF FDIALSEDLNVKTSPDVNFHLALRQRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37871; Mature: 37740
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMNGSSGKRTGTWRIRAGAAMAGLALLLTGTVARGMEVTPFRTGNMAPLVQIHGLPVPD CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEECCCCCC SARILASREGEVSAVADLSNNYAVDSKGNEHIILDGETYRFALDLRYGLVPGVEAGIEIP CCEEEECCCCCEEEEEECCCCEEECCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCEEE FIVQSGGFLDGFIEWFHKAFGFTNGGREYAPRDRLRYRYDTNGTDRFRIDDSNAGIGDIR EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEE LTGGIQLYDDGATAPRRVALRSALKLPTGDSDKLRGSGSVDFALWLAASDDYRLGDWGHL EECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCEECCCEEE TLFANAGGTVMGDGDVLGDQQRNLAAMGTFGFGWSPLDWMALTVQTTWHSSLYEGSDLRE EEEECCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCHHCCCCCCEE ISTNSLLMTGGFSFAFTERTFFDIALSEDLNVKTSPDVNFHLALRQRF ECCCCEEEECCCEEEEECCEEEEEEECCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure AMNGSSGKRTGTWRIRAGAAMAGLALLLTGTVARGMEVTPFRTGNMAPLVQIHGLPVPD CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEECCCCCC SARILASREGEVSAVADLSNNYAVDSKGNEHIILDGETYRFALDLRYGLVPGVEAGIEIP CCEEEECCCCCEEEEEECCCCEEECCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCEEE FIVQSGGFLDGFIEWFHKAFGFTNGGREYAPRDRLRYRYDTNGTDRFRIDDSNAGIGDIR EEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEEEE LTGGIQLYDDGATAPRRVALRSALKLPTGDSDKLRGSGSVDFALWLAASDDYRLGDWGHL EECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCEECCCEEE TLFANAGGTVMGDGDVLGDQQRNLAAMGTFGFGWSPLDWMALTVQTTWHSSLYEGSDLRE EEEECCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCHHCCCCCCEE ISTNSLLMTGGFSFAFTERTFFDIALSEDLNVKTSPDVNFHLALRQRF ECCCCEEEECCCEEEEECCEEEEEEECCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA