Click here to switch to the map view.

The map label for this gene is yqaA [H]

Identifier: 78221566

GI number: 78221566

Start: 383805

End: 384248

Strand: Reverse

Name: yqaA [H]

Synonym: Gmet_0345

Alternate gene names: 78221566

Gene position: 384248-383805 (Counterclockwise)

Preceding gene: 78221571

Following gene: 78221565

Centisome position: 9.61

GC content: 65.09

Gene sequence:

>444_bases
ATGGAGCAGCTCCTGACAACCCATAGCCTTCCGGCCCTCTTCGGCCTGAGTTTCCTTGCGTCTACCCTGGTCCCCATCGG
TTCCGAGTGGCTTCTGGTCACGCTCCTCCTCAAGCATCATGACCCGGCGCTGGCGGTGGGCGTGGCAACCGTCGGCAACT
GGCTCGGGGCCTGCACCACCTACGCCATCGGCATGTGGGGCGGCCCCTTTCTGGTGCGCAGAGTCCTCAGGATCGACGAG
GCGACGGAGCGCCGGGCCGACCGTCTCTATGGCCGGTACGGCTCCTGGTCCCTTCTCTTTTCGTGGCTGCCGGTCATCGG
CGACCCCCTCTGCCTTGTGGGAGGAATCCTCCGGGTGAGGTTCATCCGGTTCTCGCTCCTTGTGGGGAGCGGAAAACTGG
CCCGCTACGCCTTTATCGCCTGGATCACCGTGCGGGGGATGTGA

Upstream 100 bases:

>100_bases
GGGTCGTATAGTCGCCCAACCCATTAGAATATGTCAAGCCCTAATTTCTGCAGATGCAAACCCTTTGACATTTTCCGTCC
CCTTCCGCTAGGGTTACACA

Downstream 100 bases:

>100_bases
TGCCCAAGCGGAATATCGAAAACGCCATTGTTCGGATGCTGAAGCGTAAGCCTTTCTACGGCCGGTTCCTCCTGGGACTA
CGCCGGGAGGGAGGGAACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MEQLLTTHSLPALFGLSFLASTLVPIGSEWLLVTLLLKHHDPALAVGVATVGNWLGACTTYAIGMWGGPFLVRRVLRIDE
ATERRADRLYGRYGSWSLLFSWLPVIGDPLCLVGGILRVRFIRFSLLVGSGKLARYAFIAWITVRGM

Sequences:

>Translated_147_residues
MEQLLTTHSLPALFGLSFLASTLVPIGSEWLLVTLLLKHHDPALAVGVATVGNWLGACTTYAIGMWGGPFLVRRVLRIDE
ATERRADRLYGRYGSWSLLFSWLPVIGDPLCLVGGILRVRFIRFSLLVGSGKLARYAFIAWITVRGM
>Mature_147_residues
MEQLLTTHSLPALFGLSFLASTLVPIGSEWLLVTLLLKHHDPALAVGVATVGNWLGACTTYAIGMWGGPFLVRRVLRIDE
ATERRADRLYGRYGSWSLLFSWLPVIGDPLCLVGGILRVRFIRFSLLVGSGKLARYAFIAWITVRGM

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=140, Percent_Identity=40, Blast_Score=76, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 16259; Mature: 16259

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLLTTHSLPALFGLSFLASTLVPIGSEWLLVTLLLKHHDPALAVGVATVGNWLGACTT
CCCHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YAIGMWGGPFLVRRVLRIDEATERRADRLYGRYGSWSLLFSWLPVIGDPLCLVGGILRVR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
FIRFSLLVGSGKLARYAFIAWITVRGM
HHHHHHHHCCCCHHHHHHHHHHEECCC
>Mature Secondary Structure
MEQLLTTHSLPALFGLSFLASTLVPIGSEWLLVTLLLKHHDPALAVGVATVGNWLGACTT
CCCHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YAIGMWGGPFLVRRVLRIDEATERRADRLYGRYGSWSLLFSWLPVIGDPLCLVGGILRVR
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
FIRFSLLVGSGKLARYAFIAWITVRGM
HHHHHHHHCCCCHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]