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The map label for this gene is 78221556

Identifier: 78221556

GI number: 78221556

Start: 374609

End: 374887

Strand: Direct

Name: 78221556

Synonym: Gmet_0335

Alternate gene names: NA

Gene position: 374609-374887 (Clockwise)

Preceding gene: 78221555

Following gene: 78221557

Centisome position: 9.37

GC content: 54.12

Gene sequence:

>279_bases
GTGAAAAAAACAGCTATCACCATCGCCTTCGTCGCCACTTCTGCCTTTGCCGCACATGTTTTCGCCGCCGACGTATTTGA
ATTCCCCGCATCAATGGGTAAAGTGACATTCCCCCATAAAATGCACCAGGAGATGCTGAAGGACTGCAAGAAGTGCCACG
AAAACGGACCGGGCAAGATCAAGGACTTCGGCAAGGACTGGGCCCACAAGACCTGCAAGGGGTGCCATACCGAGCTGAAG
AAAGGCCCGGTCGGCTGCACGGACTGCCACAAGAAGTAA

Upstream 100 bases:

>100_bases
TGTATCATCCTCACCTGGTGGTATTATTCGCGTAAGAACGCTGAAGTCCCCTGCTAATGCCGTTTCCCAGCAGGCATCTA
ACCAACAAAAGGAGAACAAT

Downstream 100 bases:

>100_bases
ATATGGGAACCTGCGGTAGGGGCGCTGCTTGCCGCGCCGCCCCTACCGTTTAGCCACCGAATCGATGGCCTAAAGAGGTG
ATGCCATGATCTCCATTGAA

Product: cytochrome c3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MKKTAITIAFVATSAFAAHVFAADVFEFPASMGKVTFPHKMHQEMLKDCKKCHENGPGKIKDFGKDWAHKTCKGCHTELK
KGPVGCTDCHKK

Sequences:

>Translated_92_residues
MKKTAITIAFVATSAFAAHVFAADVFEFPASMGKVTFPHKMHQEMLKDCKKCHENGPGKIKDFGKDWAHKTCKGCHTELK
KGPVGCTDCHKK
>Mature_92_residues
MKKTAITIAFVATSAFAAHVFAADVFEFPASMGKVTFPHKMHQEMLKDCKKCHENGPGKIKDFGKDWAHKTCKGCHTELK
KGPVGCTDCHKK

Specific function: May be involved in anaerobic iron respiration [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002322
- InterPro:   IPR020942 [H]

Pfam domain/function: PF02085 Cytochrom_CIII [H]

EC number: NA

Molecular weight: Translated: 10165; Mature: 10165

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
10.9 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
10.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTAITIAFVATSAFAAHVFAADVFEFPASMGKVTFPHKMHQEMLKDCKKCHENGPGKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
KDFGKDWAHKTCKGCHTELKKGPVGCTDCHKK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKTAITIAFVATSAFAAHVFAADVFEFPASMGKVTFPHKMHQEMLKDCKKCHENGPGKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
KDFGKDWAHKTCKGCHTELKKGPVGCTDCHKK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA