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The map label for this gene is 78221509

Identifier: 78221509

GI number: 78221509

Start: 317492

End: 319621

Strand: Direct

Name: 78221509

Synonym: Gmet_0286

Alternate gene names: NA

Gene position: 317492-319621 (Clockwise)

Preceding gene: 78221508

Following gene: 78221510

Centisome position: 7.94

GC content: 52.3

Gene sequence:

>2130_bases
GTGGACATACTCAACTTATTCAACAATTCTTCAAGTGCGACATTTCTGTTCGAGGTTTCCGGTTCTGCAGCCGATATGTC
AGTCGTGAGTTTTACCGCTAACGAGTGGATGTCCTTGCCATACTCGGTAAGCGTTGCCTTTGCCACTCCATACGGAATTG
AATCCTTCGACGACATAATCGGTAGCGAAGCCCTGCTGACAATTATCAACAAAGACTTGCTTGCCGGAGGAGAGGATCGC
TACTTTCACGGGATTGTCAGACGACTTGAGCGTATTGGCTCAAGTAGCAACAATTATTGCCTCTATGAAGCCGAGATCGT
TCCGGCTGTTTTTCAGCTCTCCCTGCGCAAAAACTCCAGAATTTTCCAGAACACTATGACCCAGGACATCGTCAAACAGC
TTCTGGAGGAAAGTGGTATCACCTCGGACAGATACCGCTTTGCCCTCCAAAACAAGGAGCGGTTGCGGAAATTTTGCGTT
CAATACAGGGAGACGGATCTCGATTTTGTAACTCGACTTCTCGAAGAAGAAGGGATGTTTTACTTTTTCGAGCATTATTC
CGATAAGCATGTTCTTGTTATAAGTGACAGCAGTGTTGTCCACGTTCCAATCAACGGTAATCCTTCGATTACCTTCAACT
CAAACGGCGGCATGGTTGCTGAGACAGAAAGCATCTATGGCTTTACCTCGTCCCAAAGGATGACATCAGAGGTATTCGTT
CATCGGAACTTTAATTTCAAGAATCCTTCAGTTGACATGACCGCGAAAGCATCCGACTCGCAGGAGTCAAAACGGGAAAT
TTATGAGTATCCCGCTCTCCATGTTACGCAAGAGAGGGGTAGCGCACTTGCCAGAGCCCACAGGGAAGGACTCAAGACAA
TGCAGAAGCAGGGTCATGGCCAGAGTTCGTCCTGTCGACTGACGCCAGGGTACAACTTTGCTCTCATTGGCCACGATTCA
GCGAGCCTGAACATTGAATATCTCATTGTGGACGTTTCTCATTCGGGCACTCAACCCCAGTCGCTCGAGGAGATGTCCCA
AGGGCCTTTCTCGTACGGCAACAGTTTTACTGTCATTCCGGCAACAACCCCGTTCCGCCCCACTGCCACTCGACAAAAGC
CCATAGTAAAAGGGATTCAGACCGCTATCGTGGTTGGTCCCAAGGGCGAAGAGATCTACGCCGATGAGTATGGTCGGATA
AAGGTTCAGTTCCATTGGGACAGGGAAGGCCGCCGTGACGAGAAGAGTTCCTGCTGGCTCCGCATAGGGCAGACTTGGAG
TGGAAACGGTTGGGGCATGATTAACATCCCCCGGATTGGAGACGAGGTACTGGTCGACTTTATCGATGGAGATCCGGATC
GTCCCATTATCGTCGGCAGCGTCAACAACGCCGAATCTCCCGCACTCTTTTCCCTCCCCGCCAACAAAACCCAAAGCGGC
ATCCGTACCCGCAGCTATCCCAACGGCGGCCGCGACAACTACCACGAACTTCGCTTCGAAGACAAAAAGGGTAGCGAGGA
GATCTACCTTCAGAGTGAGAAGGACTGGAACATCCTGGTTAAGAACGACAAGACCCAGAATGTTGAACACGACGAGGCTC
TACATGTGGCAAACAACCGGCTGAAGACCGTCGGAGTTGACCAGATGGTGCAGGTGGGAGCCAACCACACCGAAATCATC
GGTGCCAATAAGAGTATTTCCGTCGGCTCAAACAAGACCGAGACGGTGGGGCTCAACTCTGCGGAAACGGTTGGGCTTGC
CAAGGAGCTGACCATCGGCGGACTTTATCAGGTCAGCGTCGGTGGGGTCATGAACGAGACCGTCATCGGCGCCAAGGCCG
AGGAAGTGGGGGTGACCAAGGCGGTGCTGGTCGGCGCTCACATGACCGAGAAGGTGGCCGGGAACCGCTCGCTCACCGTG
GGGCAGAACCTCTCGGCAACGGTCAGCCAGAACACCACCGTGAAGGCCAAGGCGATAGTTCTGGAAGCCGATGACGAGAT
CATCTTCAAGACGGGCAGCTCTACCATCTCCCTGAAATCCAGCGGCGAGATTGTCGTTACGGGAGCGACCATAACCGAGA
AAGCCAGCGGTGAAATCGTTATAAAGGGTGCCAGGACTTCGGTGAATTGA

Upstream 100 bases:

>100_bases
TGTTTTTCTGAAATCATGTCACATATTGACAAATATTCACTTCATTTAGACGTTCAGTGCTTGTTCTGGCGTTTTCATAA
TCAATCGGAGGCGCTCACTG

Downstream 100 bases:

>100_bases
AATGGCGTCCCAGTCCCGCAACCAACCAGACAAAACGGTTACGGATCGTGTCGTCATAACCGGCATTGGAACTGTAACCT
CCCTTGGCTGCTCCCAATGG

Product: Rhs element Vgr protein:Gp5-like

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Conserved Hypothethical Protein; Rhs Element Vgr Family; Rhs Protein; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Rhs/Vgr-Family Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Vgr Family Type VI Secretion System; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein

Number of amino acids: Translated: 709; Mature: 709

Protein sequence:

>709_residues
MDILNLFNNSSSATFLFEVSGSAADMSVVSFTANEWMSLPYSVSVAFATPYGIESFDDIIGSEALLTIINKDLLAGGEDR
YFHGIVRRLERIGSSSNNYCLYEAEIVPAVFQLSLRKNSRIFQNTMTQDIVKQLLEESGITSDRYRFALQNKERLRKFCV
QYRETDLDFVTRLLEEEGMFYFFEHYSDKHVLVISDSSVVHVPINGNPSITFNSNGGMVAETESIYGFTSSQRMTSEVFV
HRNFNFKNPSVDMTAKASDSQESKREIYEYPALHVTQERGSALARAHREGLKTMQKQGHGQSSSCRLTPGYNFALIGHDS
ASLNIEYLIVDVSHSGTQPQSLEEMSQGPFSYGNSFTVIPATTPFRPTATRQKPIVKGIQTAIVVGPKGEEIYADEYGRI
KVQFHWDREGRRDEKSSCWLRIGQTWSGNGWGMINIPRIGDEVLVDFIDGDPDRPIIVGSVNNAESPALFSLPANKTQSG
IRTRSYPNGGRDNYHELRFEDKKGSEEIYLQSEKDWNILVKNDKTQNVEHDEALHVANNRLKTVGVDQMVQVGANHTEII
GANKSISVGSNKTETVGLNSAETVGLAKELTIGGLYQVSVGGVMNETVIGAKAEEVGVTKAVLVGAHMTEKVAGNRSLTV
GQNLSATVSQNTTVKAKAIVLEADDEIIFKTGSSTISLKSSGEIVVTGATITEKASGEIVIKGARTSVN

Sequences:

>Translated_709_residues
MDILNLFNNSSSATFLFEVSGSAADMSVVSFTANEWMSLPYSVSVAFATPYGIESFDDIIGSEALLTIINKDLLAGGEDR
YFHGIVRRLERIGSSSNNYCLYEAEIVPAVFQLSLRKNSRIFQNTMTQDIVKQLLEESGITSDRYRFALQNKERLRKFCV
QYRETDLDFVTRLLEEEGMFYFFEHYSDKHVLVISDSSVVHVPINGNPSITFNSNGGMVAETESIYGFTSSQRMTSEVFV
HRNFNFKNPSVDMTAKASDSQESKREIYEYPALHVTQERGSALARAHREGLKTMQKQGHGQSSSCRLTPGYNFALIGHDS
ASLNIEYLIVDVSHSGTQPQSLEEMSQGPFSYGNSFTVIPATTPFRPTATRQKPIVKGIQTAIVVGPKGEEIYADEYGRI
KVQFHWDREGRRDEKSSCWLRIGQTWSGNGWGMINIPRIGDEVLVDFIDGDPDRPIIVGSVNNAESPALFSLPANKTQSG
IRTRSYPNGGRDNYHELRFEDKKGSEEIYLQSEKDWNILVKNDKTQNVEHDEALHVANNRLKTVGVDQMVQVGANHTEII
GANKSISVGSNKTETVGLNSAETVGLAKELTIGGLYQVSVGGVMNETVIGAKAEEVGVTKAVLVGAHMTEKVAGNRSLTV
GQNLSATVSQNTTVKAKAIVLEADDEIIFKTGSSTISLKSSGEIVVTGATITEKASGEIVIKGARTSVN
>Mature_709_residues
MDILNLFNNSSSATFLFEVSGSAADMSVVSFTANEWMSLPYSVSVAFATPYGIESFDDIIGSEALLTIINKDLLAGGEDR
YFHGIVRRLERIGSSSNNYCLYEAEIVPAVFQLSLRKNSRIFQNTMTQDIVKQLLEESGITSDRYRFALQNKERLRKFCV
QYRETDLDFVTRLLEEEGMFYFFEHYSDKHVLVISDSSVVHVPINGNPSITFNSNGGMVAETESIYGFTSSQRMTSEVFV
HRNFNFKNPSVDMTAKASDSQESKREIYEYPALHVTQERGSALARAHREGLKTMQKQGHGQSSSCRLTPGYNFALIGHDS
ASLNIEYLIVDVSHSGTQPQSLEEMSQGPFSYGNSFTVIPATTPFRPTATRQKPIVKGIQTAIVVGPKGEEIYADEYGRI
KVQFHWDREGRRDEKSSCWLRIGQTWSGNGWGMINIPRIGDEVLVDFIDGDPDRPIIVGSVNNAESPALFSLPANKTQSG
IRTRSYPNGGRDNYHELRFEDKKGSEEIYLQSEKDWNILVKNDKTQNVEHDEALHVANNRLKTVGVDQMVQVGANHTEII
GANKSISVGSNKTETVGLNSAETVGLAKELTIGGLYQVSVGGVMNETVIGAKAEEVGVTKAVLVGAHMTEKVAGNRSLTV
GQNLSATVSQNTTVKAKAIVLEADDEIIFKTGSSTISLKSSGEIVVTGATITEKASGEIVIKGARTSVN

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78013; Mature: 78013

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILNLFNNSSSATFLFEVSGSAADMSVVSFTANEWMSLPYSVSVAFATPYGIESFDDII
CCCEEECCCCCCEEEEEEECCCCCCEEEEEEECHHHHCCCEEEEEEEECCCCCCHHHHHH
GSEALLTIINKDLLAGGEDRYFHGIVRRLERIGSSSNNYCLYEAEIVPAVFQLSLRKNSR
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHHCCCCH
IFQNTMTQDIVKQLLEESGITSDRYRFALQNKERLRKFCVQYRETDLDFVTRLLEEEGMF
HHHHHHHHHHHHHHHHHCCCCCHHEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCE
YFFEHYSDKHVLVISDSSVVHVPINGNPSITFNSNGGMVAETESIYGFTSSQRMTSEVFV
EEEEECCCCEEEEEECCCEEEEEECCCCCEEECCCCCEEEECCCEEEECCCCCCEEEEEE
HRNFNFKNPSVDMTAKASDSQESKREIYEYPALHVTQERGSALARAHREGLKTMQKQGHG
EECCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC
QSSSCRLTPGYNFALIGHDSASLNIEYLIVDVSHSGTQPQSLEEMSQGPFSYGNSFTVIP
CCCCEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEE
ATTPFRPTATRQKPIVKGIQTAIVVGPKGEEIYADEYGRIKVQFHWDREGRRDEKSSCWL
CCCCCCCCCCCCCHHHHCCEEEEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCCEEE
RIGQTWSGNGWGMINIPRIGDEVLVDFIDGDPDRPIIVGSVNNAESPALFSLPANKTQSG
EECCEECCCCEEEEECCCCCHHHEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCCCC
IRTRSYPNGGRDNYHELRFEDKKGSEEIYLQSEKDWNILVKNDKTQNVEHDEALHVANNR
CEECCCCCCCCCCCHHEEEECCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHCCC
LKTVGVDQMVQVGANHTEIIGANKSISVGSNKTETVGLNSAETVGLAKELTIGGLYQVSV
EEECCHHHHHHHCCCCEEEEECCCEEECCCCCCEEECCCCHHHCCCHHHEEECCEEEEEE
GGVMNETVIGAKAEEVGVTKAVLVGAHMTEKVAGNRSLTVGQNLSATVSQNTTVKAKAIV
CCEECCEEECCCHHHCCCEEEEEEECHHHHHHCCCCEEEECCCCEEEECCCCEEEEEEEE
LEADDEIIFKTGSSTISLKSSGEIVVTGATITEKASGEIVIKGARTSVN
EECCCCEEEEECCCEEEEECCCCEEEEECEEEECCCCCEEEEECCCCCC
>Mature Secondary Structure
MDILNLFNNSSSATFLFEVSGSAADMSVVSFTANEWMSLPYSVSVAFATPYGIESFDDII
CCCEEECCCCCCEEEEEEECCCCCCEEEEEEECHHHHCCCEEEEEEEECCCCCCHHHHHH
GSEALLTIINKDLLAGGEDRYFHGIVRRLERIGSSSNNYCLYEAEIVPAVFQLSLRKNSR
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCHHHHHHCCCCH
IFQNTMTQDIVKQLLEESGITSDRYRFALQNKERLRKFCVQYRETDLDFVTRLLEEEGMF
HHHHHHHHHHHHHHHHHCCCCCHHEEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHCCCE
YFFEHYSDKHVLVISDSSVVHVPINGNPSITFNSNGGMVAETESIYGFTSSQRMTSEVFV
EEEEECCCCEEEEEECCCEEEEEECCCCCEEECCCCCEEEECCCEEEECCCCCCEEEEEE
HRNFNFKNPSVDMTAKASDSQESKREIYEYPALHVTQERGSALARAHREGLKTMQKQGHG
EECCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCC
QSSSCRLTPGYNFALIGHDSASLNIEYLIVDVSHSGTQPQSLEEMSQGPFSYGNSFTVIP
CCCCEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCEEEEEE
ATTPFRPTATRQKPIVKGIQTAIVVGPKGEEIYADEYGRIKVQFHWDREGRRDEKSSCWL
CCCCCCCCCCCCCHHHHCCEEEEEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCCEEE
RIGQTWSGNGWGMINIPRIGDEVLVDFIDGDPDRPIIVGSVNNAESPALFSLPANKTQSG
EECCEECCCCEEEEECCCCCHHHEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCCCC
IRTRSYPNGGRDNYHELRFEDKKGSEEIYLQSEKDWNILVKNDKTQNVEHDEALHVANNR
CEECCCCCCCCCCCHHEEEECCCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHCCC
LKTVGVDQMVQVGANHTEIIGANKSISVGSNKTETVGLNSAETVGLAKELTIGGLYQVSV
EEECCHHHHHHHCCCCEEEEECCCEEECCCCCCEEECCCCHHHCCCHHHEEECCEEEEEE
GGVMNETVIGAKAEEVGVTKAVLVGAHMTEKVAGNRSLTVGQNLSATVSQNTTVKAKAIV
CCEECCEEECCCHHHCCCEEEEEEECHHHHHHCCCCEEEECCCCEEEECCCCEEEEEEEE
LEADDEIIFKTGSSTISLKSSGEIVVTGATITEKASGEIVIKGARTSVN
EECCCCEEEEECCCEEEEECCCCEEEEECEEEECCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA