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The map label for this gene is 78221380

Identifier: 78221380

GI number: 78221380

Start: 186383

End: 186715

Strand: Direct

Name: 78221380

Synonym: Gmet_0155

Alternate gene names: NA

Gene position: 186383-186715 (Clockwise)

Preceding gene: 78221379

Following gene: 78221381

Centisome position: 4.66

GC content: 59.76

Gene sequence:

>333_bases
ATGAAAAAGGGAATTATCATCTCCATCAGCCTGCTGGCCACGGCGGCGTTCGCCACGGCCGGCCTCGCCGACACCAAGAA
GGGGGGGAAGATCGACGGCGCCAAGGAATTCAAGGAGCACTGCGCCGTCTGCCACCCCGACGGCGGCAACATCGTCAACC
CCGCCAAGCCCCTGAAGAAAGCGACCCTGGAGGCCAACGGGGTCAAGACCTGGAAAGACATCGTTGCCAAGATGCGCAAC
CCCGGACCGGGGATGACCAAGTTCGAGAAGAAGGATGTGAGCGACAAAGAGGCAAGGGCAATCGCGGAGTATGTTCTGAA
GACCTTCAAGTAG

Upstream 100 bases:

>100_bases
GGGTGACGCCGGAGCGGGGAGAGGAAATCCTGAGCAACGCGCGGGAAACCGCAGCAACCGTGCCAGAAGGACCCGGCACA
CCACAAGAGGAGGAGAACGT

Downstream 100 bases:

>100_bases
AGGCAAGAGTGGCGACTGGCCACGGTCGCCACTCTCTTCTGTTTTTGACGGAGGATGGGATGCTCAGGATCAAGCGGATA
TACGATCCGCCGGCGCCGGA

Product: cytochrome c, class I

Products: NA

Alternate protein names: Cytochrome C Family Protein; Lipoprotein Cytochrome C

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MKKGIIISISLLATAAFATAGLADTKKGGKIDGAKEFKEHCAVCHPDGGNIVNPAKPLKKATLEANGVKTWKDIVAKMRN
PGPGMTKFEKKDVSDKEARAIAEYVLKTFK

Sequences:

>Translated_110_residues
MKKGIIISISLLATAAFATAGLADTKKGGKIDGAKEFKEHCAVCHPDGGNIVNPAKPLKKATLEANGVKTWKDIVAKMRN
PGPGMTKFEKKDVSDKEARAIAEYVLKTFK
>Mature_110_residues
MKKGIIISISLLATAAFATAGLADTKKGGKIDGAKEFKEHCAVCHPDGGNIVNPAKPLKKATLEANGVKTWKDIVAKMRN
PGPGMTKFEKKDVSDKEARAIAEYVLKTFK

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11770; Mature: 11770

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKGIIISISLLATAAFATAGLADTKKGGKIDGAKEFKEHCAVCHPDGGNIVNPAKPLKK
CCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCEECCCCCCCCCCCHHHHH
ATLEANGVKTWKDIVAKMRNPGPGMTKFEKKDVSDKEARAIAEYVLKTFK
HHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKGIIISISLLATAAFATAGLADTKKGGKIDGAKEFKEHCAVCHPDGGNIVNPAKPLKK
CCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCEECCCCCCCCCCCHHHHH
ATLEANGVKTWKDIVAKMRNPGPGMTKFEKKDVSDKEARAIAEYVLKTFK
HHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA