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The map label for this gene is 78221342

Identifier: 78221342

GI number: 78221342

Start: 141014

End: 141871

Strand: Reverse

Name: 78221342

Synonym: Gmet_0115

Alternate gene names: NA

Gene position: 141871-141014 (Counterclockwise)

Preceding gene: 78221343

Following gene: 78221341

Centisome position: 3.55

GC content: 63.4

Gene sequence:

>858_bases
ATGCCTAACCATCACACCATGTCCCCTGGGCCGTCCAACGGCCCGGTGACCCTCATGTTCATCGGCGGCGGAAGCCGCTG
CCCCGCGTTCATCGGCGCCCTCAAGGCGGTGGAGGAACTGCGGATTCCCGTCGGAAAAATCATCGGCGCCTCGGGGGGGA
GCATCGTGGCGGCCCTCTATGCCGCGGGGTATTCTCCCGATGAACTCCACCGCCTCTCCCTTGACACCGACATCGGGGCA
TTCCGGGACTTCTCGCCCCGGGGCGCCCTGGCCGGCATGGGAGTCTGCCGGGGGGACGCCCTGGAACGGTGGCTGGATGA
AAAGCTGGGGGGGAAGCATCTCGGTGACGGCTTGCGCATCCCCCTCGGCATCGTTGCCACCGACATTCTCAACCACACCC
CCCACCTCCTCTGCGGCGACAATCACCCCGACCTGAAGGTCTCTGCCGCCGTCCGTTTTTCCATGGGGATTCCCCTGGTT
TTCGCCTGGAAGAAATATTCCCACCGGGGGCGGGACTACGTCTTCATCGACGGCTCCCTCATGGCGGGGATCATCGAGGG
GCAGTGCGCCGACGCGGGACGCACCCTCACCATCAAGACCTTCGCCAAGCGGAGCATAAGCCGGCCGGCCTCGTCGGTTC
TGAGTCTGCGGCGCTACGGATCAGACCTGCTCTCCATCTTTTACGGCGCCATGGACCGGGAATTTCTCAAGGGGGGGAGA
TGGAAGGACACCATTACCATCCACTGCGGCACGGTTTCCCCCCTCACCTTTTCCCTCAGTTCGGCGGAAAAGGAATTTCT
CTTCGAGCAGGGATACCACCAGGTGGCCAAGTACCTTCGCTACAAGGGAGGGTTCTGA

Upstream 100 bases:

>100_bases
AGAGCAGCTCCCCCGCATCTGCTAGCAGTCAGCATCCATCAGCAGGATTGTTTTGTGCTATCTTTACTTCAGTGTTGAAG
TATCTCAGGGGGGAAATGTC

Downstream 100 bases:

>100_bases
CGACGGCAAGGTTTCCGTTGTCTCTGCCGGAGAATTTCTGTTAGGATGCCCTCATCCCTCTTTTTTGCTAAAGATTGCGC
CGCGCCTGCCGATAGATATA

Product: patatin

Products: NA

Alternate protein names: Esterase; Patatin-Like Phospholipase; Patatin-Like Phospholipase Family Protein; Phospholipase; Phospholipase Patatin Family; Exported Phospholipase; Exported Phospholipase Patatin-Like; Transmembrane Protein; Esterase Of Alpha-Beta Hydrolase Superfamily; Exported Phospholipase Patatin-Like Protein; Esterase Of Alpha-Beta Hydrolase Superfamily Protein; Serine Protease; Conserved Protein YqhO

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MPNHHTMSPGPSNGPVTLMFIGGGSRCPAFIGALKAVEELRIPVGKIIGASGGSIVAALYAAGYSPDELHRLSLDTDIGA
FRDFSPRGALAGMGVCRGDALERWLDEKLGGKHLGDGLRIPLGIVATDILNHTPHLLCGDNHPDLKVSAAVRFSMGIPLV
FAWKKYSHRGRDYVFIDGSLMAGIIEGQCADAGRTLTIKTFAKRSISRPASSVLSLRRYGSDLLSIFYGAMDREFLKGGR
WKDTITIHCGTVSPLTFSLSSAEKEFLFEQGYHQVAKYLRYKGGF

Sequences:

>Translated_285_residues
MPNHHTMSPGPSNGPVTLMFIGGGSRCPAFIGALKAVEELRIPVGKIIGASGGSIVAALYAAGYSPDELHRLSLDTDIGA
FRDFSPRGALAGMGVCRGDALERWLDEKLGGKHLGDGLRIPLGIVATDILNHTPHLLCGDNHPDLKVSAAVRFSMGIPLV
FAWKKYSHRGRDYVFIDGSLMAGIIEGQCADAGRTLTIKTFAKRSISRPASSVLSLRRYGSDLLSIFYGAMDREFLKGGR
WKDTITIHCGTVSPLTFSLSSAEKEFLFEQGYHQVAKYLRYKGGF
>Mature_284_residues
PNHHTMSPGPSNGPVTLMFIGGGSRCPAFIGALKAVEELRIPVGKIIGASGGSIVAALYAAGYSPDELHRLSLDTDIGAF
RDFSPRGALAGMGVCRGDALERWLDEKLGGKHLGDGLRIPLGIVATDILNHTPHLLCGDNHPDLKVSAAVRFSMGIPLVF
AWKKYSHRGRDYVFIDGSLMAGIIEGQCADAGRTLTIKTFAKRSISRPASSVLSLRRYGSDLLSIFYGAMDREFLKGGRW
KDTITIHCGTVSPLTFSLSSAEKEFLFEQGYHQVAKYLRYKGGF

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30816; Mature: 30685

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNHHTMSPGPSNGPVTLMFIGGGSRCPAFIGALKAVEELRIPVGKIIGASGGSIVAALY
CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHEECCCCCHHHHHHH
AAGYSPDELHRLSLDTDIGAFRDFSPRGALAGMGVCRGDALERWLDEKLGGKHLGDGLRI
HCCCCHHHHEEEECCCCCCHHCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PLGIVATDILNHTPHLLCGDNHPDLKVSAAVRFSMGIPLVFAWKKYSHRGRDYVFIDGSL
CHHHHHHHHHCCCCCEEECCCCCCEEEEEEEEEECCCCEEEEEHHHCCCCCEEEEECCHH
MAGIIEGQCADAGRTLTIKTFAKRSISRPASSVLSLRRYGSDLLSIFYGAMDREFLKGGR
EEHHHCCCCCCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WKDTITIHCGTVSPLTFSLSSAEKEFLFEQGYHQVAKYLRYKGGF
CCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PNHHTMSPGPSNGPVTLMFIGGGSRCPAFIGALKAVEELRIPVGKIIGASGGSIVAALY
CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHEECCCCCHHHHHHH
AAGYSPDELHRLSLDTDIGAFRDFSPRGALAGMGVCRGDALERWLDEKLGGKHLGDGLRI
HCCCCHHHHEEEECCCCCCHHCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PLGIVATDILNHTPHLLCGDNHPDLKVSAAVRFSMGIPLVFAWKKYSHRGRDYVFIDGSL
CHHHHHHHHHCCCCCEEECCCCCCEEEEEEEEEECCCCEEEEEHHHCCCCCEEEEECCHH
MAGIIEGQCADAGRTLTIKTFAKRSISRPASSVLSLRRYGSDLLSIFYGAMDREFLKGGR
EEHHHCCCCCCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WKDTITIHCGTVSPLTFSLSSAEKEFLFEQGYHQVAKYLRYKGGF
CCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA