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The map label for this gene is 78189658

Identifier: 78189658

GI number: 78189658

Start: 2211573

End: 2212253

Strand: Reverse

Name: 78189658

Synonym: Cag_1702

Alternate gene names: NA

Gene position: 2212253-2211573 (Counterclockwise)

Preceding gene: 78189659

Following gene: 78189657

Centisome position: 86.01

GC content: 43.02

Gene sequence:

>681_bases
ATGTTAAAATTAGGTAAAGGGGTTTCTACTCAACCCTCAATTGGCAGAATAGGTGGTGAGTGGTATATTGGAGGCATGAA
ACAATCATTTAAGCATCAAGCGCTACGGCGCATAAAAAAAGGAGCCCTCCTCCTTTGTATTTTCGCTGCAACTACCCTTA
CGGCGTGCAGCAATAATGAGCTGGAAAAGCTTCAGCAAGAGGCGTGGAAAAATCCTAACGATGCGGCGTTAACGCTACAA
CTTGGTTACAAGTATGCTCAAGAAGGGCGTTACATGGAGGCTAATGAATCGTTTCAAAAAGTATTGGCGCTTGACCCAAA
GCGCGATGAAGCGTTGCAAGCGTTAGGTGCTACAGCCTTCCGCCAAAAGCAGTACAGTCAAGCTATTTCATACTTTCAGC
AGCATCTTGAGCGCGCCCCTGCTGACTCGGCTCGACTTTACAATCTCGGTAATGCGTATATGCAACTAAAGCAGTATGAC
AAAGCTACTGAGCTTTATAATAAAGCAATTGATAATAGCACTGCCTTTATTGATGCTCATTACAATTTAGCGGTGTGTTA
TGCTAAAACAGGACGGCGTAATGAGGCTCAGGCAATTTATGAGTGGCTTCTTACTAAAAACAATTATCTTGCCACCTCAT
TACAAAAGCATCTTGATAAAGAGAATCAAGCACCAAAGTAA

Upstream 100 bases:

>100_bases
CTGCATAGGAACACGGCAAATTAAGGCTGTTATGCTTACTGATGTAGTGGTGAAGTAAGTGCCCCGTTAGGTTTCGTGAG
GTGTGCTAACAAGCTGTTTA

Downstream 100 bases:

>100_bases
TATAAGGTGTCGCCACTGTAGTATTCACATCCGCCATCACCCAAGAGGACAAACGTGTTGAAGTAGCAACATCATGCCAA
CAACTACACCAAACGATGAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Sulfotransferase; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MLKLGKGVSTQPSIGRIGGEWYIGGMKQSFKHQALRRIKKGALLLCIFAATTLTACSNNELEKLQQEAWKNPNDAALTLQ
LGYKYAQEGRYMEANESFQKVLALDPKRDEALQALGATAFRQKQYSQAISYFQQHLERAPADSARLYNLGNAYMQLKQYD
KATELYNKAIDNSTAFIDAHYNLAVCYAKTGRRNEAQAIYEWLLTKNNYLATSLQKHLDKENQAPK

Sequences:

>Translated_226_residues
MLKLGKGVSTQPSIGRIGGEWYIGGMKQSFKHQALRRIKKGALLLCIFAATTLTACSNNELEKLQQEAWKNPNDAALTLQ
LGYKYAQEGRYMEANESFQKVLALDPKRDEALQALGATAFRQKQYSQAISYFQQHLERAPADSARLYNLGNAYMQLKQYD
KATELYNKAIDNSTAFIDAHYNLAVCYAKTGRRNEAQAIYEWLLTKNNYLATSLQKHLDKENQAPK
>Mature_226_residues
MLKLGKGVSTQPSIGRIGGEWYIGGMKQSFKHQALRRIKKGALLLCIFAATTLTACSNNELEKLQQEAWKNPNDAALTLQ
LGYKYAQEGRYMEANESFQKVLALDPKRDEALQALGATAFRQKQYSQAISYFQQHLERAPADSARLYNLGNAYMQLKQYD
KATELYNKAIDNSTAFIDAHYNLAVCYAKTGRRNEAQAIYEWLLTKNNYLATSLQKHLDKENQAPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25597; Mature: 25597

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLGKGVSTQPSIGRIGGEWYIGGMKQSFKHQALRRIKKGALLLCIFAATTLTACSNNE
CCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHH
LEKLQQEAWKNPNDAALTLQLGYKYAQEGRYMEANESFQKVLALDPKRDEALQALGATAF
HHHHHHHHCCCCCCCEEEEEECCHHHHCCCEECCCHHHHHHHHCCCCHHHHHHHHHHHHH
RQKQYSQAISYFQQHLERAPADSARLYNLGNAYMQLKQYDKATELYNKAIDNSTAFIDAH
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
YNLAVCYAKTGRRNEAQAIYEWLLTKNNYLATSLQKHLDKENQAPK
CCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLKLGKGVSTQPSIGRIGGEWYIGGMKQSFKHQALRRIKKGALLLCIFAATTLTACSNNE
CCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHH
LEKLQQEAWKNPNDAALTLQLGYKYAQEGRYMEANESFQKVLALDPKRDEALQALGATAF
HHHHHHHHCCCCCCCEEEEEECCHHHHCCCEECCCHHHHHHHHCCCCHHHHHHHHHHHHH
RQKQYSQAISYFQQHLERAPADSARLYNLGNAYMQLKQYDKATELYNKAIDNSTAFIDAH
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
YNLAVCYAKTGRRNEAQAIYEWLLTKNNYLATSLQKHLDKENQAPK
CCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA