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The map label for this gene is 78189597

Identifier: 78189597

GI number: 78189597

Start: 2137992

End: 2139290

Strand: Reverse

Name: 78189597

Synonym: Cag_1640

Alternate gene names: NA

Gene position: 2139290-2137992 (Counterclockwise)

Preceding gene: 78189598

Following gene: 78189596

Centisome position: 83.17

GC content: 47.65

Gene sequence:

>1299_bases
ATGAACAGAGAGGATATTAACGGTTTTTTTGCCTCAAAAGAGCAGCTCAATATGGCTGACTATCTCATACTCGACTACTA
TTTAGAGTGCGTTGGAGATATTGAGACCGCCCTTGCTCATTTTTGTAGCGAGCAATCAACCGCTCAGTGGAAGCGGGTAG
ATTATGACGAGGATTTTCGTCCAAAACATGCTGCAAAGGTTATTAGCCTAACGGTTGAGGCAGAGCTATCCTCGTTAAGC
TATCCTATTCATCATGCAACCGACGAGCCAATTCACGCCTGCCGTGTAACGATTGCTCATCCGCATACTAATTTTGGTAC
CAAGCTGCCAAATTTGCTTTCAGCCGTATGTGGCGAAGGAGCCTTTTTTACGCCGGGGGTTCCTGTGGTAAAGTTGCTTG
ATATCCATTTCCCAGACTCTTATTTGCAAGCGTTTGAAGGACCAAAATTTGGCATTGATGGCATTCGCGATCTTTTAAAA
GCCTACAATCGCCCTATCTTTTTTGGCGTAGTAAAACCTAATATTGGCTTAAGCCCTGCCGAGTTTGGTGAAATTGCTCG
CCAAAGTTGGCTTGGTGGACTTGATATTGCCAAAGATGATGAAATGCTTGCCGATGTAACATGGTCAAGCCTTGCCGATC
GTTCTCGTGAGCTTGGCGAAGCACGGCGCAATGCCGAACAAGCTACGGGCGAGCCAAAGGTCTATCTTGCCAACATTACC
GATGAAGTTGATCGTTTACTTGAGCAGCACGATGTTGCCGTCCGCAATGGAGCCAATGCACTGCTTATTAATGCCTTACC
CGTTGGTTTAAGTGCGGTGCGTATGCTTGCAAAGCATACAAAAGTGCCGCTGATTGGCCATTTTCCTTTTATTGCAGCGT
TTAGCCGTTTAGAGAAATTTGGTGTGCACTCTCGTGTTATGACCAAATTGCAACGCCTTGCAGGGCTTGACTCCATTATT
ATGCCGGGCTTTGGCAGTCGCATGATGACTACCGAAGAGGAGGTTATGGCAAATGTGCAAGAGTGCTTGCAAGATTTTGG
TCATCTCCGCCGTTCATTGCCGGTACCGGGTGGCAGCGATTCTGCACTAACGCTTGAGGGGGTATATCGTAAAGTGGGAA
GTGTGGACTTTGGTTTTGTACCGGGGCGTGGCATTTTTGGTCATCCTATGGGTCCAAAAGCAGGTGCCGCAAGTATTCGC
CAAGCATGGGAAGCTATTGAGCAAGGTGTGCCGTTAGAAACCTATGCCCAAGGACGCCCTGAACTGCAAGCAATGGTTGA
TGGCGCTCACGGCAAATAA

Upstream 100 bases:

>100_bases
CATCTCAATAGTAAGTCGTCCATAGGTATCAGGTTAAGCATTTGATTTTCTTAATAGAACCCATAATGGATTTCTCCTTA
TGGGCGTATGATTTTTTTAT

Downstream 100 bases:

>100_bases
ACTATTGAGTTGAATGCTCACGCTGCATCAAAAAGTTGCAATTATTACTGGTTCTACTCGAGGCATTGGCAAAGCTATAG
CACAAGAATTTGTGCGGCAG

Product: RuBisCo-like protein

Products: 3-phospho-D-glycerate; H+

Alternate protein names: RuBisCO-like protein [H]

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MNREDINGFFASKEQLNMADYLILDYYLECVGDIETALAHFCSEQSTAQWKRVDYDEDFRPKHAAKVISLTVEAELSSLS
YPIHHATDEPIHACRVTIAHPHTNFGTKLPNLLSAVCGEGAFFTPGVPVVKLLDIHFPDSYLQAFEGPKFGIDGIRDLLK
AYNRPIFFGVVKPNIGLSPAEFGEIARQSWLGGLDIAKDDEMLADVTWSSLADRSRELGEARRNAEQATGEPKVYLANIT
DEVDRLLEQHDVAVRNGANALLINALPVGLSAVRMLAKHTKVPLIGHFPFIAAFSRLEKFGVHSRVMTKLQRLAGLDSII
MPGFGSRMMTTEEEVMANVQECLQDFGHLRRSLPVPGGSDSALTLEGVYRKVGSVDFGFVPGRGIFGHPMGPKAGAASIR
QAWEAIEQGVPLETYAQGRPELQAMVDGAHGK

Sequences:

>Translated_432_residues
MNREDINGFFASKEQLNMADYLILDYYLECVGDIETALAHFCSEQSTAQWKRVDYDEDFRPKHAAKVISLTVEAELSSLS
YPIHHATDEPIHACRVTIAHPHTNFGTKLPNLLSAVCGEGAFFTPGVPVVKLLDIHFPDSYLQAFEGPKFGIDGIRDLLK
AYNRPIFFGVVKPNIGLSPAEFGEIARQSWLGGLDIAKDDEMLADVTWSSLADRSRELGEARRNAEQATGEPKVYLANIT
DEVDRLLEQHDVAVRNGANALLINALPVGLSAVRMLAKHTKVPLIGHFPFIAAFSRLEKFGVHSRVMTKLQRLAGLDSII
MPGFGSRMMTTEEEVMANVQECLQDFGHLRRSLPVPGGSDSALTLEGVYRKVGSVDFGFVPGRGIFGHPMGPKAGAASIR
QAWEAIEQGVPLETYAQGRPELQAMVDGAHGK
>Mature_432_residues
MNREDINGFFASKEQLNMADYLILDYYLECVGDIETALAHFCSEQSTAQWKRVDYDEDFRPKHAAKVISLTVEAELSSLS
YPIHHATDEPIHACRVTIAHPHTNFGTKLPNLLSAVCGEGAFFTPGVPVVKLLDIHFPDSYLQAFEGPKFGIDGIRDLLK
AYNRPIFFGVVKPNIGLSPAEFGEIARQSWLGGLDIAKDDEMLADVTWSSLADRSRELGEARRNAEQATGEPKVYLANIT
DEVDRLLEQHDVAVRNGANALLINALPVGLSAVRMLAKHTKVPLIGHFPFIAAFSRLEKFGVHSRVMTKLQRLAGLDSII
MPGFGSRMMTTEEEVMANVQECLQDFGHLRRSLPVPGGSDSALTLEGVYRKVGSVDFGFVPGRGIFGHPMGPKAGAASIR
QAWEAIEQGVPLETYAQGRPELQAMVDGAHGK

Specific function: May be involved in sulfur metabolism and oxidative stress response. Does not show RuBisCO activity [H]

COG id: COG1850

COG function: function code G; Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO large chain family. Type IV subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000685
- InterPro:   IPR017443 [H]

Pfam domain/function: PF00016 RuBisCO_large [H]

EC number: 4.1.1.39

Molecular weight: Translated: 47426; Mature: 47426

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNREDINGFFASKEQLNMADYLILDYYLECVGDIETALAHFCSEQSTAQWKRVDYDEDFR
CCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC
PKHAAKVISLTVEAELSSLSYPIHHATDEPIHACRVTIAHPHTNFGTKLPNLLSAVCGEG
HHHHHHHHEEEEEHHHHHCCCCHHCCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHCCC
AFFTPGVPVVKLLDIHFPDSYLQAFEGPKFGIDGIRDLLKAYNRPIFFGVVKPNIGLSPA
CEECCCCCEEHHEECCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHH
EFGEIARQSWLGGLDIAKDDEMLADVTWSSLADRSRELGEARRNAEQATGEPKVYLANIT
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCH
DEVDRLLEQHDVAVRNGANALLINALPVGLSAVRMLAKHTKVPLIGHFPFIAAFSRLEKF
HHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHH
GVHSRVMTKLQRLAGLDSIIMPGFGSRMMTTEEEVMANVQECLQDFGHLRRSLPVPGGSD
CHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SALTLEGVYRKVGSVDFGFVPGRGIFGHPMGPKAGAASIRQAWEAIEQGVPLETYAQGRP
CCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCC
ELQAMVDGAHGK
HHHHHHCCCCCC
>Mature Secondary Structure
MNREDINGFFASKEQLNMADYLILDYYLECVGDIETALAHFCSEQSTAQWKRVDYDEDFR
CCCCCCCHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC
PKHAAKVISLTVEAELSSLSYPIHHATDEPIHACRVTIAHPHTNFGTKLPNLLSAVCGEG
HHHHHHHHEEEEEHHHHHCCCCHHCCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHHCCC
AFFTPGVPVVKLLDIHFPDSYLQAFEGPKFGIDGIRDLLKAYNRPIFFGVVKPNIGLSPA
CEECCCCCEEHHEECCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHH
EFGEIARQSWLGGLDIAKDDEMLADVTWSSLADRSRELGEARRNAEQATGEPKVYLANIT
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCH
DEVDRLLEQHDVAVRNGANALLINALPVGLSAVRMLAKHTKVPLIGHFPFIAAFSRLEKF
HHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHH
GVHSRVMTKLQRLAGLDSIIMPGFGSRMMTTEEEVMANVQECLQDFGHLRRSLPVPGGSD
CHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SALTLEGVYRKVGSVDFGFVPGRGIFGHPMGPKAGAASIRQAWEAIEQGVPLETYAQGRP
CCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCC
ELQAMVDGAHGK
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-ribulose 1,5-bisphosphate; CO2; H2O

Specific reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate + 2 H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12093901 [H]