| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189591
Identifier: 78189591
GI number: 78189591
Start: 2131487
End: 2132041
Strand: Reverse
Name: 78189591
Synonym: Cag_1633
Alternate gene names: NA
Gene position: 2132041-2131487 (Counterclockwise)
Preceding gene: 78189592
Following gene: 78189590
Centisome position: 82.89
GC content: 45.41
Gene sequence:
>555_bases ATGACGGTTGAGTCGAGAAAAAGGCAATTCATTGTAGAAGGCAAAATTAAGCCCTCGTTTTGCGAAGGTTGCGGTCAATT AACCGCTAAAATTTTTGTTGGCGAATGGATGCCCAGCGACAAACCAAAAGAGGAAGATGTGCTTGCGCCACTGACCTCAA AAAAAATCAAAGAGCAAAAAGCGCAAGCGCAATCCCCATCAGCGGCTGAAAACCAATATTGGGTTCGCTGTGCGGAGTGC AACCAAATTTATTTGCTGAAAGAGTGGCAAATTCAAATTGACCGCGAAGTTGATATTAATCAGCTCACGCCCGAAGAGTG CCAAGTCTATTCGCCACACGGCATTTACGCCAAAGGCGCAGCCGTTTATCATCAAGCATTGGGCGAAGTTGGCATTGTGC GCGAAAAGCAAGCAACGGGAAGCGGTGCTTTTGTGATTATTGTAGAATTTGCAAAAAGCGGGCGCAAGCAATTGCTTGAA AATGTGCAGCTTAGTAGCGGTAATGGGCAAAGCTCAACAGAACTTTTAAAACTTAAACTACGGCGTCAAGCCTAA
Upstream 100 bases:
>100_bases AAGGAGAACAACTCCTCCATAACACTGCTCATGAGTAGCAGGCGCTCTTAATAATGCAAGTCATTTTTATTCTCCCTAAC TTTCAGCATTTCCATAGCTT
Downstream 100 bases:
>100_bases AATAAAGATTAAAGCATCGCTAAAAATCTATTGTGCAAGGTGTTTACAATAATTTTTAAACATGCCTACGAGTTTTTATT ATCACACTAAAGGGGGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MTVESRKRQFIVEGKIKPSFCEGCGQLTAKIFVGEWMPSDKPKEEDVLAPLTSKKIKEQKAQAQSPSAAENQYWVRCAEC NQIYLLKEWQIQIDREVDINQLTPEECQVYSPHGIYAKGAAVYHQALGEVGIVREKQATGSGAFVIIVEFAKSGRKQLLE NVQLSSGNGQSSTELLKLKLRRQA
Sequences:
>Translated_184_residues MTVESRKRQFIVEGKIKPSFCEGCGQLTAKIFVGEWMPSDKPKEEDVLAPLTSKKIKEQKAQAQSPSAAENQYWVRCAEC NQIYLLKEWQIQIDREVDINQLTPEECQVYSPHGIYAKGAAVYHQALGEVGIVREKQATGSGAFVIIVEFAKSGRKQLLE NVQLSSGNGQSSTELLKLKLRRQA >Mature_183_residues TVESRKRQFIVEGKIKPSFCEGCGQLTAKIFVGEWMPSDKPKEEDVLAPLTSKKIKEQKAQAQSPSAAENQYWVRCAECN QIYLLKEWQIQIDREVDINQLTPEECQVYSPHGIYAKGAAVYHQALGEVGIVREKQATGSGAFVIIVEFAKSGRKQLLEN VQLSSGNGQSSTELLKLKLRRQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20600; Mature: 20469
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVESRKRQFIVEGKIKPSFCEGCGQLTAKIFVGEWMPSDKPKEEDVLAPLTSKKIKEQK CCCCCCCCEEEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH AQAQSPSAAENQYWVRCAECNQIYLLKEWQIQIDREVDINQLTPEECQVYSPHGIYAKGA HHCCCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCCCCCCCCHHHCEEECCCCCEECHH AVYHQALGEVGIVREKQATGSGAFVIIVEFAKSGRKQLLENVQLSSGNGQSSTELLKLKL HHHHHHHCCCCCEECCCCCCCCEEEEEEEHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHH RRQA HCCC >Mature Secondary Structure TVESRKRQFIVEGKIKPSFCEGCGQLTAKIFVGEWMPSDKPKEEDVLAPLTSKKIKEQK CCCCCCCEEEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH AQAQSPSAAENQYWVRCAECNQIYLLKEWQIQIDREVDINQLTPEECQVYSPHGIYAKGA HHCCCCCCCCCCEEEEEECCCEEEEEEEEEEEECCCCCCCCCCHHHCEEECCCCCEECHH AVYHQALGEVGIVREKQATGSGAFVIIVEFAKSGRKQLLENVQLSSGNGQSSTELLKLKL HHHHHHHCCCCCEECCCCCCCCEEEEEEEHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHH RRQA HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA