| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is bcp [H]
Identifier: 78189562
GI number: 78189562
Start: 2093155
End: 2093631
Strand: Reverse
Name: bcp [H]
Synonym: Cag_1602
Alternate gene names: 78189562
Gene position: 2093631-2093155 (Counterclockwise)
Preceding gene: 78189565
Following gene: 78189561
Centisome position: 81.4
GC content: 42.77
Gene sequence:
>477_bases ATGGCAACTTCATTGCTTAGTGTTGGCACTGCCGCCCCCGAATTTTCAGCCCTTGATCAAAATGGTCAATCGGTTAGCCT TACTGAATATCGCGGTCGCAAGGTAATTCTTTACTTTTATCCAAAAGATGATACACCGGGCTGCACCAAGGAGGCTTGTG CATTTCGTGATAATTTCCCTACTTTTAATGCTATAGGTGTTGAAGTTCTCGGCGTTAGCATTGATGATGGCGCCAAGCAT AAAAAGTTTGTTGAAAAGTACCAATTGCCTTTTCGTTTAGTTGCCGACCCCGATAAAACCATTGTGCAAGCCTATGGTGT TTGGGGGCTTAAAAAGTTTATGGGTAAGGAATATATGGGCACCAACCGCGTAACCTATCTTATTAATGAAGAAGGAGTTA TTGAAAAAGTTTGGCCTAAAGTTTCGCCCGAAAAACATGCTCAAGAGCTGATTGCGTACTTGCAACCAAGCGCATAA
Upstream 100 bases:
>100_bases GCTTGTAGCAACAAATCAATACTTTTTTGGGAAAAACTCAAAACAGCCTGAAAGTAGAGCATCGCTTGAATATTTTTTTT AATTTTATAATACTTTTTAC
Downstream 100 bases:
>100_bases AGCTGTTTACAATACCCTTTATAAGGTTCAGAAAAAATGATAGTTAACGAGTTTGAAAAGCTAACAGCAGGTAAGCTTTT ATTGGCTTCAGCAACAATGC
Product: bacterioferritin comigratory protein, thiol peroxidase
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MATSLLSVGTAAPEFSALDQNGQSVSLTEYRGRKVILYFYPKDDTPGCTKEACAFRDNFPTFNAIGVEVLGVSIDDGAKH KKFVEKYQLPFRLVADPDKTIVQAYGVWGLKKFMGKEYMGTNRVTYLINEEGVIEKVWPKVSPEKHAQELIAYLQPSA
Sequences:
>Translated_158_residues MATSLLSVGTAAPEFSALDQNGQSVSLTEYRGRKVILYFYPKDDTPGCTKEACAFRDNFPTFNAIGVEVLGVSIDDGAKH KKFVEKYQLPFRLVADPDKTIVQAYGVWGLKKFMGKEYMGTNRVTYLINEEGVIEKVWPKVSPEKHAQELIAYLQPSA >Mature_157_residues ATSLLSVGTAAPEFSALDQNGQSVSLTEYRGRKVILYFYPKDDTPGCTKEACAFRDNFPTFNAIGVEVLGVSIDDGAKHK KFVEKYQLPFRLVADPDKTIVQAYGVWGLKKFMGKEYMGTNRVTYLINEEGVIEKVWPKVSPEKHAQELIAYLQPSA
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI4505591, Length=148, Percent_Identity=30.4054054054054, Blast_Score=71, Evalue=4e-13, Organism=Homo sapiens, GI32455266, Length=148, Percent_Identity=30.4054054054054, Blast_Score=71, Evalue=4e-13, Organism=Homo sapiens, GI32455264, Length=148, Percent_Identity=30.4054054054054, Blast_Score=71, Evalue=4e-13, Organism=Homo sapiens, GI32189392, Length=147, Percent_Identity=32.6530612244898, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI33188454, Length=98, Percent_Identity=39.7959183673469, Blast_Score=64, Evalue=7e-11, Organism=Escherichia coli, GI1788825, Length=153, Percent_Identity=43.1372549019608, Blast_Score=144, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6322180, Length=141, Percent_Identity=34.0425531914894, Blast_Score=82, Evalue=4e-17, Organism=Drosophila melanogaster, GI17738015, Length=141, Percent_Identity=33.3333333333333, Blast_Score=66, Evalue=8e-12,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 17630; Mature: 17499
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSLLSVGTAAPEFSALDQNGQSVSLTEYRGRKVILYFYPKDDTPGCTKEACAFRDNFP CCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHCCCCC TFNAIGVEVLGVSIDDGAKHKKFVEKYQLPFRLVADPDKTIVQAYGVWGLKKFMGKEYMG CCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHCHHHHHHHHCCCCCC TNRVTYLINEEGVIEKVWPKVSPEKHAQELIAYLQPSA CCCEEEEECCCCCHHHHCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure ATSLLSVGTAAPEFSALDQNGQSVSLTEYRGRKVILYFYPKDDTPGCTKEACAFRDNFP CCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHCCCCC TFNAIGVEVLGVSIDDGAKHKKFVEKYQLPFRLVADPDKTIVQAYGVWGLKKFMGKEYMG CCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHCHHHHHHHHCCCCCC TNRVTYLINEEGVIEKVWPKVSPEKHAQELIAYLQPSA CCCEEEEECCCCCHHHHCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]