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The map label for this gene is yqgE [C]

Identifier: 78189561

GI number: 78189561

Start: 2092552

End: 2093118

Strand: Reverse

Name: yqgE [C]

Synonym: Cag_1601

Alternate gene names: 78189561

Gene position: 2093118-2092552 (Counterclockwise)

Preceding gene: 78189562

Following gene: 78189560

Centisome position: 81.38

GC content: 45.33

Gene sequence:

>567_bases
ATGATAGTTAACGAGTTTGAAAAGCTAACAGCAGGTAAGCTTTTATTGGCTTCAGCAACAATGCTGGAATCAAATTTTAA
GCGCACTGTTTTGTTGATGTGTGAACATAACGAAGAAGGTTCGCTTGGCTTTATTCTCAATCGTCCCTTAGAATTTAAAG
TGCGCGAAGCTATTCACGGCTTTAACGATGTTGATGATGTGCTGCATCAAGGCGGTCCCGTACAAGTAAACAGCATCCAT
TTTCTTCATTCGCGTGGCGATCTTATTCACAATTCGCAAGAGGTGTTGCCCGGTATTTATTGGGGTGGCAACAAAGATGA
GGTCAGCTACCTTTTAAATACGGGCGTAATGCATCCTTCGGAAATTCGCTTTTATCTTGGCTATGCGGGGTGGAGCGCTG
GGCAGCTTTTCTCAGAATTTGAGGAGGGGGCATGGTACACGGCAGAGGCAACTCCTGATGTTATTTTTAGCGATGCTTAC
GAACGCATGTGGAGCCGCACGGTTCGAGCAAAAGGTGGCGCATATCAACTGATTGCTAATTCACCCGAGCTTCCGGGTAT
GAATTAA

Upstream 100 bases:

>100_bases
GCCTAAAGTTTCGCCCGAAAAACATGCTCAAGAGCTGATTGCGTACTTGCAACCAAGCGCATAAAGCTGTTTACAATACC
CTTTATAAGGTTCAGAAAAA

Downstream 100 bases:

>100_bases
TAAGCGGTTACTGAGGTTGTTTGCTTGTTGCATAAAAAAATGTATATAACAACCCATTGTTCTTTATGGATACCTTATGT
TAGCATTGGAGCTAATCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MIVNEFEKLTAGKLLLASATMLESNFKRTVLLMCEHNEEGSLGFILNRPLEFKVREAIHGFNDVDDVLHQGGPVQVNSIH
FLHSRGDLIHNSQEVLPGIYWGGNKDEVSYLLNTGVMHPSEIRFYLGYAGWSAGQLFSEFEEGAWYTAEATPDVIFSDAY
ERMWSRTVRAKGGAYQLIANSPELPGMN

Sequences:

>Translated_188_residues
MIVNEFEKLTAGKLLLASATMLESNFKRTVLLMCEHNEEGSLGFILNRPLEFKVREAIHGFNDVDDVLHQGGPVQVNSIH
FLHSRGDLIHNSQEVLPGIYWGGNKDEVSYLLNTGVMHPSEIRFYLGYAGWSAGQLFSEFEEGAWYTAEATPDVIFSDAY
ERMWSRTVRAKGGAYQLIANSPELPGMN
>Mature_188_residues
MIVNEFEKLTAGKLLLASATMLESNFKRTVLLMCEHNEEGSLGFILNRPLEFKVREAIHGFNDVDDVLHQGGPVQVNSIH
FLHSRGDLIHNSQEVLPGIYWGGNKDEVSYLLNTGVMHPSEIRFYLGYAGWSAGQLFSEFEEGAWYTAEATPDVIFSDAY
ERMWSRTVRAKGGAYQLIANSPELPGMN

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=169, Percent_Identity=26.6272189349112, Blast_Score=73, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1601_CHLCH (Q3AQ69)

Other databases:

- EMBL:   CP000108
- RefSeq:   YP_379899.1
- ProteinModelPortal:   Q3AQ69
- SMR:   Q3AQ69
- STRING:   Q3AQ69
- GeneID:   3746676
- GenomeReviews:   CP000108_GR
- KEGG:   cch:Cag_1601
- eggNOG:   COG1678
- HOGENOM:   HBG530212
- OMA:   FAGYAGW
- ProtClustDB:   CLSK637423
- BioCyc:   CCHL340177:CAG_1601-MONOMER
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 21084; Mature: 21084

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVNEFEKLTAGKLLLASATMLESNFKRTVLLMCEHNEEGSLGFILNRPLEFKVREAIHG
CCCCHHHHHHHCHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCCCCHHHHHHHCC
FNDVDDVLHQGGPVQVNSIHFLHSRGDLIHNSQEVLPGIYWGGNKDEVSYLLNTGVMHPS
CCCHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHCCEEEECCCHHHHHHHHHCCCCCCC
EIRFYLGYAGWSAGQLFSEFEEGAWYTAEATPDVIFSDAYERMWSRTVRAKGGAYQLIAN
CEEEEEEECCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
SPELPGMN
CCCCCCCC
>Mature Secondary Structure
MIVNEFEKLTAGKLLLASATMLESNFKRTVLLMCEHNEEGSLGFILNRPLEFKVREAIHG
CCCCHHHHHHHCHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEECCCCCHHHHHHHCC
FNDVDDVLHQGGPVQVNSIHFLHSRGDLIHNSQEVLPGIYWGGNKDEVSYLLNTGVMHPS
CCCHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHCCEEEECCCHHHHHHHHHCCCCCCC
EIRFYLGYAGWSAGQLFSEFEEGAWYTAEATPDVIFSDAYERMWSRTVRAKGGAYQLIAN
CEEEEEEECCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEC
SPELPGMN
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA