| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189430
Identifier: 78189430
GI number: 78189430
Start: 1934892
End: 1935875
Strand: Reverse
Name: 78189430
Synonym: Cag_1469
Alternate gene names: NA
Gene position: 1935875-1934892 (Counterclockwise)
Preceding gene: 78189431
Following gene: 78189429
Centisome position: 75.26
GC content: 32.93
Gene sequence:
>984_bases ATGATGGAACAAGATACCAATCAATTAGCAGTTTATCAGGCGGAAAACGGAGCATTAGAACTTCGTGCGGATAGTGCTTT AGATACTATTTGGGCAAGTTTAGATCAAATAGCCGAGCTGTTTGGTAGAGATAAATCTGTAATTTCGAGGCATATAAAAA ATATTTATTTGGAATCTGAATTAGAGAAAACAGCAACTGTTGCATTTTTTGCAACAGTTCAAAAAGAAGGTTCTCGCATT GTAACTCGTAACATAGAATATTTTAACTTAGATACAATTCTTTCTGTAGGTTATCGGGTAAATTCAAAAGTTGCAACAAG ATTTCGTCAGTGGGCAACAAAAACGTTGAAACAATATATAACTCAAGGTTTTTCCATTAATCAAAAACGCTTAGAAGAAA ATAAAACTCAATTTTTAAAAACGTTAGAAGATTTAAAGATACTTACTCAAAGTAGTCAGCAAGTAGAAACCAAAGATATT CTGACACTCATTCAAAATTTTTCCCATACTTGGTTTTCCTTAGATAGCTACGATAAAAATGAATTTCCAAAACAAGGCAC CCAAGAAGCAATACAAACATCGGCTGAAGAATTATATCAAGATTTAATGCAATTAAAAGCTGAATTAGTTGCAAAAGATG AGGCTACTGAGTTATTTGCTCAAGAGAAAAATATTGGGAATTTAAAAGGCATTTTTGGGAATGTCTTTCAATCAGTTTTT GGTCAAGATGCTTATCCAAGTGTTGAAGAAAAAGCTGCTCATTTACTTTATTTTATCATTAAAAATCATCCGTTTAATGA TGGGAATAAACGAAGTGGAGCTTTTAGTTTTATTTGGTTATTGCAAAAAGCGGGCTATCAATTTAGAGATAAAATAAGTC CTGAAACTTTGACCACACTAACCATTCTTATTGCAGAGTCAAAGCCATCAGATAAAGACAAGATGATCGGGATTGTTAAA TTGGTGCTGAGTGTGGAGCCGTAA
Upstream 100 bases:
>100_bases CTTTCTGACTTTTTATTATTTGTAATGGGTCTGTAGGTACTATCTCAGTTTCACTAAAAATTTCAATGCTCTTTGAAGTA CCAAGATATAAAAAGATAGT
Downstream 100 bases:
>100_bases GGGAAAGTGTTCTCCTTGAGTTTTCTCTTTAACCTCATTTCTGAATGTTTGTTATATTACCAAGCTGTTGCTTAAATGCA CGCTTTACGAAGCCTTCCTC
Product: death-on-curing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MMEQDTNQLAVYQAENGALELRADSALDTIWASLDQIAELFGRDKSVISRHIKNIYLESELEKTATVAFFATVQKEGSRI VTRNIEYFNLDTILSVGYRVNSKVATRFRQWATKTLKQYITQGFSINQKRLEENKTQFLKTLEDLKILTQSSQQVETKDI LTLIQNFSHTWFSLDSYDKNEFPKQGTQEAIQTSAEELYQDLMQLKAELVAKDEATELFAQEKNIGNLKGIFGNVFQSVF GQDAYPSVEEKAAHLLYFIIKNHPFNDGNKRSGAFSFIWLLQKAGYQFRDKISPETLTTLTILIAESKPSDKDKMIGIVK LVLSVEP
Sequences:
>Translated_327_residues MMEQDTNQLAVYQAENGALELRADSALDTIWASLDQIAELFGRDKSVISRHIKNIYLESELEKTATVAFFATVQKEGSRI VTRNIEYFNLDTILSVGYRVNSKVATRFRQWATKTLKQYITQGFSINQKRLEENKTQFLKTLEDLKILTQSSQQVETKDI LTLIQNFSHTWFSLDSYDKNEFPKQGTQEAIQTSAEELYQDLMQLKAELVAKDEATELFAQEKNIGNLKGIFGNVFQSVF GQDAYPSVEEKAAHLLYFIIKNHPFNDGNKRSGAFSFIWLLQKAGYQFRDKISPETLTTLTILIAESKPSDKDKMIGIVK LVLSVEP >Mature_327_residues MMEQDTNQLAVYQAENGALELRADSALDTIWASLDQIAELFGRDKSVISRHIKNIYLESELEKTATVAFFATVQKEGSRI VTRNIEYFNLDTILSVGYRVNSKVATRFRQWATKTLKQYITQGFSINQKRLEENKTQFLKTLEDLKILTQSSQQVETKDI LTLIQNFSHTWFSLDSYDKNEFPKQGTQEAIQTSAEELYQDLMQLKAELVAKDEATELFAQEKNIGNLKGIFGNVFQSVF GQDAYPSVEEKAAHLLYFIIKNHPFNDGNKRSGAFSFIWLLQKAGYQFRDKISPETLTTLTILIAESKPSDKDKMIGIVK LVLSVEP
Specific function: Unknown
COG id: COG3943
COG function: function code R; Virulence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37324; Mature: 37324
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMEQDTNQLAVYQAENGALELRADSALDTIWASLDQIAELFGRDKSVISRHIKNIYLESE CCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LEKTATVAFFATVQKEGSRIVTRNIEYFNLDTILSVGYRVNSKVATRFRQWATKTLKQYI HHHHHHHHHHHHHHHCCCEEEEECCCEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH TQGFSINQKRLEENKTQFLKTLEDLKILTQSSQQVETKDILTLIQNFSHTWFSLDSYDKN HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCCC EFPKQGTQEAIQTSAEELYQDLMQLKAELVAKDEATELFAQEKNIGNLKGIFGNVFQSVF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GQDAYPSVEEKAAHLLYFIIKNHPFNDGNKRSGAFSFIWLLQKAGYQFRDKISPETLTTL CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCHHHHEE TILIAESKPSDKDKMIGIVKLVLSVEP EEEEECCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MMEQDTNQLAVYQAENGALELRADSALDTIWASLDQIAELFGRDKSVISRHIKNIYLESE CCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LEKTATVAFFATVQKEGSRIVTRNIEYFNLDTILSVGYRVNSKVATRFRQWATKTLKQYI HHHHHHHHHHHHHHHCCCEEEEECCCEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH TQGFSINQKRLEENKTQFLKTLEDLKILTQSSQQVETKDILTLIQNFSHTWFSLDSYDKN HCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCCC EFPKQGTQEAIQTSAEELYQDLMQLKAELVAKDEATELFAQEKNIGNLKGIFGNVFQSVF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GQDAYPSVEEKAAHLLYFIIKNHPFNDGNKRSGAFSFIWLLQKAGYQFRDKISPETLTTL CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCCHHHHEE TILIAESKPSDKDKMIGIVKLVLSVEP EEEEECCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA