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The map label for this gene is fmoA [H]

Identifier: 78189294

GI number: 78189294

Start: 1795246

End: 1796346

Strand: Reverse

Name: fmoA [H]

Synonym: Cag_1329

Alternate gene names: 78189294

Gene position: 1796346-1795246 (Counterclockwise)

Preceding gene: 78189296

Following gene: 78189292

Centisome position: 69.84

GC content: 45.59

Gene sequence:

>1101_bases
ATGGCTCTTTTCGGCACTAAAGACACCACTACCGCTCACTCAGACTATGAGATCGTTCTTGAGAGCGGTTCAAGCTCGTG
GGGCAAGGTAAAATGTCGGGCAAAGGTAAATGTACCACCAGCCCTGCCATTACTTCCCGCTGACTGTAACGTCAAAATCA
ATGTAAAGCCACTTGACCCAGCCAAAGGGTTTGTGCGTTTTTCGGCTGTCATCGAATCAATTGTTGACAGTACAAAAAGC
AAGTTGGTTGTTGAGGCTGACATTGCCAACGAAACCAAAGAAAGAAGAATCTGCGTCGGCGAAGGCTCTGTTTCAGTCGG
TGACTTCTCGCACACATTCTCCTTTGAAGGTTCGGTTGTCAACATTTTCTACTACCGCTCTGATGCAGTAAGAAGAAACG
TTCCAAACCCAATCTACATGCAGGGACGTCAATTCCACGACATCATCATGAAAGTACCGCTTGACAATCCTGATGTGATT
GACACATGGGAAAACACCTTGCGTGCTATTCAATCAACAGGTGCATTTAATGATTGGATTCGTGAATTGTGGTTTATTGG
ACCAGCCTTTACCGCTCTTAACGAAGGTGGTCAAAGAATTTCAAAAATTGAAGTAAACAGCATTGGCACCCAAAGCGGTG
ATAAAGGTCCAGTTGGTGTAACCAGATGGCGTTTTTCACATGGTGGTTCTGGTATTGTTGATTCAATTTCCCGCTGGATG
GAACTCTTCCCTGTTGACAAGCTCAACAAACCAGCCTCAGTTGAAGCTGGCTTCCGTTCTGACTCACAAGGTATTGAGGT
TAAAGTTGATGGTGAATTCCCTGGTGTATCGGTTGATGCAGGCGGTGGACTTCGCAGAATTCTTAACCACCCACTTATTC
CGTTGGTTCACCACGGTATGGTTGGTAAATTCAATGACTTCACGGTTGATTCTCAATTAAGAATTGTACTTCCAAAAGGT
TACAAAGTGCGCTATGCTGCTCCGCAGTTCCGCTCACAAAACCTTGAAGAGTATCGCTGGAGCGGTGGTGCTTATGCCCG
TTGGGTTGAGCATGTTTGCAAAGGTGGTACAGGGCAATTTGAAGTGTTGTACGCTCAATAA

Upstream 100 bases:

>100_bases
TTTATAGAAAGCTGTTACCAAACAAGGAATGGTTTCGGTGAGAAAGTTTTTTCCCTGAACATATCCAATTTCAACGCCAC
CAGAAAAAGGAGAACTGATT

Downstream 100 bases:

>100_bases
GAGCAACTGCTTCATCAGTTCAACAAAAAAAAGCCTGCATAATGCAGGCTTTTTTTTTGGTTTATGTCAACGAAAGCAAG
GTATTGCAGTTGTGTTTGGC

Product: bacteriochlorophyll A protein

Products: NA

Alternate protein names: BCP; BChl a protein; Fenna-Matthews-Olson protein; FMO protein [H]

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MALFGTKDTTTAHSDYEIVLESGSSSWGKVKCRAKVNVPPALPLLPADCNVKINVKPLDPAKGFVRFSAVIESIVDSTKS
KLVVEADIANETKERRICVGEGSVSVGDFSHTFSFEGSVVNIFYYRSDAVRRNVPNPIYMQGRQFHDIIMKVPLDNPDVI
DTWENTLRAIQSTGAFNDWIRELWFIGPAFTALNEGGQRISKIEVNSIGTQSGDKGPVGVTRWRFSHGGSGIVDSISRWM
ELFPVDKLNKPASVEAGFRSDSQGIEVKVDGEFPGVSVDAGGGLRRILNHPLIPLVHHGMVGKFNDFTVDSQLRIVLPKG
YKVRYAAPQFRSQNLEEYRWSGGAYARWVEHVCKGGTGQFEVLYAQ

Sequences:

>Translated_366_residues
MALFGTKDTTTAHSDYEIVLESGSSSWGKVKCRAKVNVPPALPLLPADCNVKINVKPLDPAKGFVRFSAVIESIVDSTKS
KLVVEADIANETKERRICVGEGSVSVGDFSHTFSFEGSVVNIFYYRSDAVRRNVPNPIYMQGRQFHDIIMKVPLDNPDVI
DTWENTLRAIQSTGAFNDWIRELWFIGPAFTALNEGGQRISKIEVNSIGTQSGDKGPVGVTRWRFSHGGSGIVDSISRWM
ELFPVDKLNKPASVEAGFRSDSQGIEVKVDGEFPGVSVDAGGGLRRILNHPLIPLVHHGMVGKFNDFTVDSQLRIVLPKG
YKVRYAAPQFRSQNLEEYRWSGGAYARWVEHVCKGGTGQFEVLYAQ
>Mature_365_residues
ALFGTKDTTTAHSDYEIVLESGSSSWGKVKCRAKVNVPPALPLLPADCNVKINVKPLDPAKGFVRFSAVIESIVDSTKSK
LVVEADIANETKERRICVGEGSVSVGDFSHTFSFEGSVVNIFYYRSDAVRRNVPNPIYMQGRQFHDIIMKVPLDNPDVID
TWENTLRAIQSTGAFNDWIRELWFIGPAFTALNEGGQRISKIEVNSIGTQSGDKGPVGVTRWRFSHGGSGIVDSISRWME
LFPVDKLNKPASVEAGFRSDSQGIEVKVDGEFPGVSVDAGGGLRRILNHPLIPLVHHGMVGKFNDFTVDSQLRIVLPKGY
KVRYAAPQFRSQNLEEYRWSGGAYARWVEHVCKGGTGQFEVLYAQ

Specific function: Intermediary in the transfer of excitation energy from the chlorophyll to the reaction centers [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003426 [H]

Pfam domain/function: PF02327 BChl_A [H]

EC number: NA

Molecular weight: Translated: 40453; Mature: 40322

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALFGTKDTTTAHSDYEIVLESGSSSWGKVKCRAKVNVPPALPLLPADCNVKINVKPLDP
CCEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCEECCCCCEEEEEEECCC
AKGFVRFSAVIESIVDSTKSKLVVEADIANETKERRICVGEGSVSVGDFSHTFSFEGSVV
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCEEECCCCEEEEECCCEE
NIFYYRSDAVRRNVPNPIYMQGRQFHDIIMKVPLDNPDVIDTWENTLRAIQSTGAFNDWI
EEEEEECCHHHCCCCCCEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHH
RELWFIGPAFTALNEGGQRISKIEVNSIGTQSGDKGPVGVTRWRFSHGGSGIVDSISRWM
HHHHHHCHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
ELFPVDKLNKPASVEAGFRSDSQGIEVKVDGEFPGVSVDAGGGLRRILNHPLIPLVHHGM
HHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCHHHHHCCCCHHHHHCCC
VGKFNDFTVDSQLRIVLPKGYKVRYAAPQFRSQNLEEYRWSGGAYARWVEHVCKGGTGQF
CCCCCCEEECCEEEEEECCCEEEEEECCCHHHCCHHHHHCCCCHHHHHHHHHHCCCCCCE
EVLYAQ
EEEEEC
>Mature Secondary Structure 
ALFGTKDTTTAHSDYEIVLESGSSSWGKVKCRAKVNVPPALPLLPADCNVKINVKPLDP
CEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCEECCCCCEEEEEEECCC
AKGFVRFSAVIESIVDSTKSKLVVEADIANETKERRICVGEGSVSVGDFSHTFSFEGSVV
HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCEEECCCCEEEEECCCEE
NIFYYRSDAVRRNVPNPIYMQGRQFHDIIMKVPLDNPDVIDTWENTLRAIQSTGAFNDWI
EEEEEECCHHHCCCCCCEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHH
RELWFIGPAFTALNEGGQRISKIEVNSIGTQSGDKGPVGVTRWRFSHGGSGIVDSISRWM
HHHHHHCHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHH
ELFPVDKLNKPASVEAGFRSDSQGIEVKVDGEFPGVSVDAGGGLRRILNHPLIPLVHHGM
HHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCHHHHHCCCCHHHHHCCC
VGKFNDFTVDSQLRIVLPKGYKVRYAAPQFRSQNLEEYRWSGGAYARWVEHVCKGGTGQF
CCCCCCEEECCEEEEEECCCEEEEEECCCHHHCCHHHHHCCCCHHHHHHHHHHCCCCCCE
EVLYAQ
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12093901; 9268671 [H]