| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78189166
Identifier: 78189166
GI number: 78189166
Start: 1594402
End: 1595328
Strand: Reverse
Name: 78189166
Synonym: Cag_1199
Alternate gene names: NA
Gene position: 1595328-1594402 (Counterclockwise)
Preceding gene: 78189167
Following gene: 78189165
Centisome position: 62.02
GC content: 43.69
Gene sequence:
>927_bases ATGATAGACCCGATGTATCGCCAGCAGGTTGACCTTTTGCTTCAGATATTACCGCTTGTAGCCAAAGAAAAAGTTTTTGC GTTAAAAGGTGGCACGGCAATCAACCTGTTTGTACGAGATATGCCCCGGTTATCTGTTGATATTGACCTAACTTACTTGC CTTTAGATGACCGTGATACTGCGATGAAAGGAATATCTGAGGCTTTGAACCATATCAGGCAGAAGATCAATCATGCAATG CCGGGTATAAAGGCCTATTTGGTTCAGCAAAGCAGCGGACAGGAAGCAAAACTGACCTGTCAATCTTCATCAGCACAGCT CAAAATTGAGGTAAACACCATTATCAGGGGTCATGTGTTTCCTCCCCGAATAATGGATATTGCAAAATCCGTAGAAGCCG AATTTCAAAAGTTTGTGACCATGCCGGTGGTGTCACACGCGGAATTGTTCGGTGGAAAAATTTGTGCAGCACTTGATCGC CAGCATCCGCGAGACATTTTTGATATTCATCAGCTTTTTGCGCATGAAGTATTTACCGATGAGATCAGATTGGGATTTAT TGCCATGCTTATCAGTCATTCCAGACCAATCCATGAACTCATTCGTCCAAATCTGCTCGATCAAAGAACGGTGTTTCAGC ATCAGTTTACCGGAATGACCTTCACGGCTTTCAGTTACGACGACTATGAATCAACGCGAAAACGCTTGGTCAAGGAGATT CATGAACACTTGAGCGATACCGACAAACGTTTTCTTTTAAGCTTCAAAAGCGGCACTCCTGATTGGGAACTTTTGCCCAT GGATAATCTGCGCCTTATGCCAGCAGTACAGTGGAAACTTGCCAATATCGTAAAGCTTAAAGCTCAAAATTCAGCCAAGC ATAAAGCACAGCTCAAAGCCTTGGACAACGCTCTGAAGGATTGTTAA
Upstream 100 bases:
>100_bases ACACTAAACTTGATCTCGGAAAAGGAGCAAGAAGTGTCATTAAAGGCGGTGTTTATGTTGAAAAATATTCTCTCAATCTG CCAGAGGAGCTGGTAAAGCT
Downstream 100 bases:
>100_bases AAGAAGAAGCTGTCGGCATTGAGGTCAGCAAGAACGGCGATAACTTGCGTGACAAACCAACGCCTCTCTGGAAAATGAAG AGACATCCCAACGAAACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MIDPMYRQQVDLLLQILPLVAKEKVFALKGGTAINLFVRDMPRLSVDIDLTYLPLDDRDTAMKGISEALNHIRQKINHAM PGIKAYLVQQSSGQEAKLTCQSSSAQLKIEVNTIIRGHVFPPRIMDIAKSVEAEFQKFVTMPVVSHAELFGGKICAALDR QHPRDIFDIHQLFAHEVFTDEIRLGFIAMLISHSRPIHELIRPNLLDQRTVFQHQFTGMTFTAFSYDDYESTRKRLVKEI HEHLSDTDKRFLLSFKSGTPDWELLPMDNLRLMPAVQWKLANIVKLKAQNSAKHKAQLKALDNALKDC
Sequences:
>Translated_308_residues MIDPMYRQQVDLLLQILPLVAKEKVFALKGGTAINLFVRDMPRLSVDIDLTYLPLDDRDTAMKGISEALNHIRQKINHAM PGIKAYLVQQSSGQEAKLTCQSSSAQLKIEVNTIIRGHVFPPRIMDIAKSVEAEFQKFVTMPVVSHAELFGGKICAALDR QHPRDIFDIHQLFAHEVFTDEIRLGFIAMLISHSRPIHELIRPNLLDQRTVFQHQFTGMTFTAFSYDDYESTRKRLVKEI HEHLSDTDKRFLLSFKSGTPDWELLPMDNLRLMPAVQWKLANIVKLKAQNSAKHKAQLKALDNALKDC >Mature_308_residues MIDPMYRQQVDLLLQILPLVAKEKVFALKGGTAINLFVRDMPRLSVDIDLTYLPLDDRDTAMKGISEALNHIRQKINHAM PGIKAYLVQQSSGQEAKLTCQSSSAQLKIEVNTIIRGHVFPPRIMDIAKSVEAEFQKFVTMPVVSHAELFGGKICAALDR QHPRDIFDIHQLFAHEVFTDEIRLGFIAMLISHSRPIHELIRPNLLDQRTVFQHQFTGMTFTAFSYDDYESTRKRLVKEI HEHLSDTDKRFLLSFKSGTPDWELLPMDNLRLMPAVQWKLANIVKLKAQNSAKHKAQLKALDNALKDC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35195; Mature: 35195
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPMYRQQVDLLLQILPLVAKEKVFALKGGTAINLFVRDMPRLSVDIDLTYLPLDDRDT CCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCCCEEEEEEEEEECCCCCHH AMKGISEALNHIRQKINHAMPGIKAYLVQQSSGQEAKLTCQSSSAQLKIEVNTIIRGHVF HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEEEEEECCCC PPRIMDIAKSVEAEFQKFVTMPVVSHAELFGGKICAALDRQHPRDIFDIHQLFAHEVFTD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH EIRLGFIAMLISHSRPIHELIRPNLLDQRTVFQHQFTGMTFTAFSYDDYESTRKRLVKEI HHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHH HEHLSDTDKRFLLSFKSGTPDWELLPMDNLRLMPAVQWKLANIVKLKAQNSAKHKAQLKA HHHHCCCCCEEEEEECCCCCCEEEEECCCCEECHHHHHHHHHHHHHHCCCCHHHHHHHHH LDNALKDC HHHHHHCC >Mature Secondary Structure MIDPMYRQQVDLLLQILPLVAKEKVFALKGGTAINLFVRDMPRLSVDIDLTYLPLDDRDT CCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEEECCCCEEEEEEEEEECCCCCHH AMKGISEALNHIRQKINHAMPGIKAYLVQQSSGQEAKLTCQSSSAQLKIEVNTIIRGHVF HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEEEEEECCCC PPRIMDIAKSVEAEFQKFVTMPVVSHAELFGGKICAALDRQHPRDIFDIHQLFAHEVFTD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH EIRLGFIAMLISHSRPIHELIRPNLLDQRTVFQHQFTGMTFTAFSYDDYESTRKRLVKEI HHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHH HEHLSDTDKRFLLSFKSGTPDWELLPMDNLRLMPAVQWKLANIVKLKAQNSAKHKAQLKA HHHHCCCCCEEEEEECCCCCCEEEEECCCCEECHHHHHHHHHHHHHHCCCCHHHHHHHHH LDNALKDC HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA