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The map label for this gene is ytnP [H]

Identifier: 78189105

GI number: 78189105

Start: 1532858

End: 1533700

Strand: Reverse

Name: ytnP [H]

Synonym: Cag_1138

Alternate gene names: 78189105

Gene position: 1533700-1532858 (Counterclockwise)

Preceding gene: 78189109

Following gene: 78189104

Centisome position: 59.63

GC content: 48.28

Gene sequence:

>843_bases
ATGCTACAAATTGGTAACTATCGGATTGCGGCACTGTTGGTGCAAGAATTTGCACTTGATGGTGGCGCTATGTTTGGCGT
GGTGCCAAAGGTGTTTTGGCAGCAACAAGCTCCAGCCGATGCGCTGAATCGCGTAACGTTAGCGGCACGATTGTTGCTTA
TTTCGGGCGCTGGTCGCAATATGTTGGTTGACGTTGGGCTTGGCGATGCGTGGAACGATAAACAGCGCTCGATTTATGCT
ATTTCGCCCTTTCGCCTTCGTGAAGAGCTTCAGCGTTTTCAGCTTACCGCAGATGATATTACCGATATAATTCTTACCCA
TCTCCATTTTGACCACATTGCGGGGGCATTTGCGGTTGAAAATGGTGGCTTGGTGTCGCTCTTTCCTGCGGCAACTTTTC
ATGTGCAAGAGCGCAATCTTCAAGTAGCATGTCAACCTCATATCAAAGAAAAGGGGAGTTATCTTTCACCCTACATTGAT
GCGTTGATGCAGCAGTGTAATGTTTCGTTAAAACAAGGTGAGTGTGAGCTTTGCGAAGGTGTTTCGCTGTTGGTGAGTAA
CGGGCATACGCAAGCTCAGCAGTTGGTAAAAATATCCGATGGCAAGCAAACGCTTTTGCATGGTGGCGATTTATTGCCAT
CAGCGGCGCACTTGCCCCTTGCGTGGATTACAAGTTACGATGTTGAACCGTTGCAAGCTATCAACGAAAAAACGGCATTA
TTAGAAACGGCAATGGACGAGGAGTGGTTGCTCTTTTTTGGGCACGATCCTCGCTATGCAGCCGCACGTATTCGGCGTGG
TGAAAAGGGGGCTGAAGTGGCTGAATATTTTGAGGAGCTGTAG

Upstream 100 bases:

>100_bases
AAGAGTGTTTTGGAAAAACTTCTATACTAAGCCAGCAGCCATTTCTTTTTCGTATCATCCCTCATAATCCATTCATCCCA
TAACCATCCCTTCTCTCATT

Downstream 100 bases:

>100_bases
AAAGGTTATCACGACACGACAAGAACACAGATGGAAGATTGGTTACCAAGTAAGCGGCAGATTGAGCAGCTTCAAGCAAA
GGTTTTTGCTTTTTATGGGG

Product: putative metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLQIGNYRIAALLVQEFALDGGAMFGVVPKVFWQQQAPADALNRVTLAARLLLISGAGRNMLVDVGLGDAWNDKQRSIYA
ISPFRLREELQRFQLTADDITDIILTHLHFDHIAGAFAVENGGLVSLFPAATFHVQERNLQVACQPHIKEKGSYLSPYID
ALMQQCNVSLKQGECELCEGVSLLVSNGHTQAQQLVKISDGKQTLLHGGDLLPSAAHLPLAWITSYDVEPLQAINEKTAL
LETAMDEEWLLFFGHDPRYAAARIRRGEKGAEVAEYFEEL

Sequences:

>Translated_280_residues
MLQIGNYRIAALLVQEFALDGGAMFGVVPKVFWQQQAPADALNRVTLAARLLLISGAGRNMLVDVGLGDAWNDKQRSIYA
ISPFRLREELQRFQLTADDITDIILTHLHFDHIAGAFAVENGGLVSLFPAATFHVQERNLQVACQPHIKEKGSYLSPYID
ALMQQCNVSLKQGECELCEGVSLLVSNGHTQAQQLVKISDGKQTLLHGGDLLPSAAHLPLAWITSYDVEPLQAINEKTAL
LETAMDEEWLLFFGHDPRYAAARIRRGEKGAEVAEYFEEL
>Mature_280_residues
MLQIGNYRIAALLVQEFALDGGAMFGVVPKVFWQQQAPADALNRVTLAARLLLISGAGRNMLVDVGLGDAWNDKQRSIYA
ISPFRLREELQRFQLTADDITDIILTHLHFDHIAGAFAVENGGLVSLFPAATFHVQERNLQVACQPHIKEKGSYLSPYID
ALMQQCNVSLKQGECELCEGVSLLVSNGHTQAQQLVKISDGKQTLLHGGDLLPSAAHLPLAWITSYDVEPLQAINEKTAL
LETAMDEEWLLFFGHDPRYAAARIRRGEKGAEVAEYFEEL

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 30982; Mature: 30982

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQIGNYRIAALLVQEFALDGGAMFGVVPKVFWQQQAPADALNRVTLAARLLLISGAGRN
CCEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCC
MLVDVGLGDAWNDKQRSIYAISPFRLREELQRFQLTADDITDIILTHLHFDHIAGAFAVE
EEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEC
NGGLVSLFPAATFHVQERNLQVACQPHIKEKGSYLSPYIDALMQQCNVSLKQGECELCEG
CCCEEEECCCEEEEEECCCEEEEECCCHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCC
VSLLVSNGHTQAQQLVKISDGKQTLLHGGDLLPSAAHLPLAWITSYDVEPLQAINEKTAL
HHEEECCCCHHHHHHHHHCCCCEEEHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH
LETAMDEEWLLFFGHDPRYAAARIRRGEKGAEVAEYFEEL
HHHHCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHC
>Mature Secondary Structure
MLQIGNYRIAALLVQEFALDGGAMFGVVPKVFWQQQAPADALNRVTLAARLLLISGAGRN
CCEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCC
MLVDVGLGDAWNDKQRSIYAISPFRLREELQRFQLTADDITDIILTHLHFDHIAGAFAVE
EEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEC
NGGLVSLFPAATFHVQERNLQVACQPHIKEKGSYLSPYIDALMQQCNVSLKQGECELCEG
CCCEEEECCCEEEEEECCCEEEEECCCHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCC
VSLLVSNGHTQAQQLVKISDGKQTLLHGGDLLPSAAHLPLAWITSYDVEPLQAINEKTAL
HHEEECCCCHHHHHHHHHCCCCEEEHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHH
LETAMDEEWLLFFGHDPRYAAARIRRGEKGAEVAEYFEEL
HHHHCCCCEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]