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The map label for this gene is hxuB [H]

Identifier: 78189023

GI number: 78189023

Start: 1436182

End: 1437912

Strand: Reverse

Name: hxuB [H]

Synonym: Cag_1056

Alternate gene names: 78189023

Gene position: 1437912-1436182 (Counterclockwise)

Preceding gene: 78189024

Following gene: 78189022

Centisome position: 55.9

GC content: 46.1

Gene sequence:

>1731_bases
ATGGTTCCAAAAATTATAACATCTCTTGTAGCGGGAAGCGTGGTTTTTTCTGCTTCACTTCAAGCGGCTCCGCTTGTACC
CAATGCGGGTAGCTTACAGCAGCAACAGCGCCCAGCGGCGGTTTCAAAACAGTTCAAACAAAACGTTCAAGCTGACAAAA
AAGCTACTGAAAAAAGTAAGCCATTAGCTATTAAACCTTCGGCTGAAGGTAAGGTTTTTGTAAAGCGTTTTACCTTTTCT
GGTTATGAGGGCACAGTGTCGCAAGATGAGTTGCAGAATATGGTAAAGCCTTATGTTGGCAAGCAATTTAGTATGGAGCA
ACTTGATGCGGTGTCTGCCAATATCACTTCTGAGCTGCGTGCAAAAGGATGGTTGGCATTAGCAACCCTTCCACCGCAAG
ATGTTACCTCTGGTACAGTTCATGTGGCTATTAACACTGGTAAAGCTGCCATGACCTCTATTACGAGCGATGGATCAATT
CGCATTTGCAAGCGTCCGCTTCGCCAAATTGCTGAAAAAACCTGCCCTCCCGGTTCTCCCCTTAATACTAATGATCAAGA
GCGTGCTGTGCTTTTGATGAACGATATTCCTGGTATTGCAGCCACCACATCGCTTTCAAAAGGAATGCAGGCTGGTACTA
CCGACGTTAATTATCTCATTCACGAAGGTGCATTGCTTTCAGGCGTTTTGTGGGCTGATAATTATGGCAACCGCTACACT
GGCTCGTTGATGCAATATGCCGTGCTTAATATTAACGATCCTTTCCACTGTGGCGAGCAAATTATGCTTAATGCTGCTCA
TTCGGCTGGTATGTGGCGAGGTGGCGCGAATTATAGCGTGCCAATGCCCTTCCTTTTTGCAGGTTTAACGGGTCATGCCG
GTGTTTCGGGAATGCAATATGAATTGCTTGAGGAGCTTGAAGTGCTTGATTATAAAGGCACGAGCGTTAAAGCTGATGCT
GGGTTCAGTTACGCTTTGCATCGTAGTCGTAAAGCCAATCTTACCTCTGATGTTTCCTACACATACAAAGGTTTAAAAGA
CAGGATGAGCAACACCGATTTGCGTGATGGCACCATTCAATTTGTAACCTTTGGTTTATCGGGAAATTACCACGACGACC
TCTTTTTTGGCGCTTTAACAACGGCTGATGTAAGCATTACTAAGGGTTCGCTTGATGAGAAAATTCGTGATATCCACTTA
AGCGGCGCTCAAGGTGGTTACACGCGGTTTAATCTGGAGCTTACGCGTTATCAGCGCTTTTCGGAACCTTGTGCACTCGA
TCTCACTTTTTCTGCCCAACACACGTTAAAAAATCTTGATAGCAGCGACAAATTCTACCTTGGTGGTCCATACACTGTTC
GTGCTTATCCGCTTGGTGAGGCGGCAGGCGATCACGGTGCGCTCTTTAAGGCTGATTTACGCCACCGCATTCCTGTACCG
GCTGAGTGGGGCGATATGTTTGTTAACGCATTTTATGATGTGGGCCATGTTACACTCAATAAAGATCGCTATGCGGGTGA
TTCGGCTACAATGAACGCAACTGGTAGTAACGATTACTGGCTGCAAGGTGCGGGTGTTGGTCTCCGCTACGATATTTCAG
AAACCTTCACCCTTCAAGGGTGCTGGGCGCACACCATTGGCAAAAATTCTGGTCGCGCATTTGATGGCAATAACTCTGAT
GGCAAGAGCGATAATCATCGCTTTTGGGTTCAGGGACTTATGAATTTCTAA

Upstream 100 bases:

>100_bases
GAGCTTGATGCCATACTTTTGCTTTCATTGCAATAGAGGGGGGGCATTGAGGACGATTGTAGTATTCGGACACCTTAACC
AGAAAGGGAGATAACGTAAC

Downstream 100 bases:

>100_bases
TATCGAAGTGTAAACGAACAAGAATTAGCCGTTATCGGTTTTTCCATAACTATCTGCGAGGAAAACTATGAACAGGATAT
TTAACGTGATCTGGTCGGTT

Product: hemolysin activation/secretion protein-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 576

Protein sequence:

>576_residues
MVPKIITSLVAGSVVFSASLQAAPLVPNAGSLQQQQRPAAVSKQFKQNVQADKKATEKSKPLAIKPSAEGKVFVKRFTFS
GYEGTVSQDELQNMVKPYVGKQFSMEQLDAVSANITSELRAKGWLALATLPPQDVTSGTVHVAINTGKAAMTSITSDGSI
RICKRPLRQIAEKTCPPGSPLNTNDQERAVLLMNDIPGIAATTSLSKGMQAGTTDVNYLIHEGALLSGVLWADNYGNRYT
GSLMQYAVLNINDPFHCGEQIMLNAAHSAGMWRGGANYSVPMPFLFAGLTGHAGVSGMQYELLEELEVLDYKGTSVKADA
GFSYALHRSRKANLTSDVSYTYKGLKDRMSNTDLRDGTIQFVTFGLSGNYHDDLFFGALTTADVSITKGSLDEKIRDIHL
SGAQGGYTRFNLELTRYQRFSEPCALDLTFSAQHTLKNLDSSDKFYLGGPYTVRAYPLGEAAGDHGALFKADLRHRIPVP
AEWGDMFVNAFYDVGHVTLNKDRYAGDSATMNATGSNDYWLQGAGVGLRYDISETFTLQGCWAHTIGKNSGRAFDGNNSD
GKSDNHRFWVQGLMNF

Sequences:

>Translated_576_residues
MVPKIITSLVAGSVVFSASLQAAPLVPNAGSLQQQQRPAAVSKQFKQNVQADKKATEKSKPLAIKPSAEGKVFVKRFTFS
GYEGTVSQDELQNMVKPYVGKQFSMEQLDAVSANITSELRAKGWLALATLPPQDVTSGTVHVAINTGKAAMTSITSDGSI
RICKRPLRQIAEKTCPPGSPLNTNDQERAVLLMNDIPGIAATTSLSKGMQAGTTDVNYLIHEGALLSGVLWADNYGNRYT
GSLMQYAVLNINDPFHCGEQIMLNAAHSAGMWRGGANYSVPMPFLFAGLTGHAGVSGMQYELLEELEVLDYKGTSVKADA
GFSYALHRSRKANLTSDVSYTYKGLKDRMSNTDLRDGTIQFVTFGLSGNYHDDLFFGALTTADVSITKGSLDEKIRDIHL
SGAQGGYTRFNLELTRYQRFSEPCALDLTFSAQHTLKNLDSSDKFYLGGPYTVRAYPLGEAAGDHGALFKADLRHRIPVP
AEWGDMFVNAFYDVGHVTLNKDRYAGDSATMNATGSNDYWLQGAGVGLRYDISETFTLQGCWAHTIGKNSGRAFDGNNSD
GKSDNHRFWVQGLMNF
>Mature_576_residues
MVPKIITSLVAGSVVFSASLQAAPLVPNAGSLQQQQRPAAVSKQFKQNVQADKKATEKSKPLAIKPSAEGKVFVKRFTFS
GYEGTVSQDELQNMVKPYVGKQFSMEQLDAVSANITSELRAKGWLALATLPPQDVTSGTVHVAINTGKAAMTSITSDGSI
RICKRPLRQIAEKTCPPGSPLNTNDQERAVLLMNDIPGIAATTSLSKGMQAGTTDVNYLIHEGALLSGVLWADNYGNRYT
GSLMQYAVLNINDPFHCGEQIMLNAAHSAGMWRGGANYSVPMPFLFAGLTGHAGVSGMQYELLEELEVLDYKGTSVKADA
GFSYALHRSRKANLTSDVSYTYKGLKDRMSNTDLRDGTIQFVTFGLSGNYHDDLFFGALTTADVSITKGSLDEKIRDIHL
SGAQGGYTRFNLELTRYQRFSEPCALDLTFSAQHTLKNLDSSDKFYLGGPYTVRAYPLGEAAGDHGALFKADLRHRIPVP
AEWGDMFVNAFYDVGHVTLNKDRYAGDSATMNATGSNDYWLQGAGVGLRYDISETFTLQGCWAHTIGKNSGRAFDGNNSD
GKSDNHRFWVQGLMNF

Specific function: Probable member of a two partner secretion pathway (TPS) in which it mediates the secretion of huxA [H]

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2 [H]

EC number: NA

Molecular weight: Translated: 62629; Mature: 62629

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPKIITSLVAGSVVFSASLQAAPLVPNAGSLQQQQRPAAVSKQFKQNVQADKKATEKSK
CCHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
PLAIKPSAEGKVFVKRFTFSGYEGTVSQDELQNMVKPYVGKQFSMEQLDAVSANITSELR
CEEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AKGWLALATLPPQDVTSGTVHVAINTGKAAMTSITSDGSIRICKRPLRQIAEKTCPPGSP
CCCEEEEEECCCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC
LNTNDQERAVLLMNDIPGIAATTSLSKGMQAGTTDVNYLIHEGALLSGVLWADNYGNRYT
CCCCCCCCEEEEEECCCCCEEHHHHHCCCCCCCCCHHHEEECCCHHEEEEEECCCCCCCC
GSLMQYAVLNINDPFHCGEQIMLNAAHSAGMWRGGANYSVPMPFLFAGLTGHAGVSGMQY
CCEEEEEEEECCCCCCCCCHHEEECHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHH
ELLEELEVLDYKGTSVKADAGFSYALHRSRKANLTSDVSYTYKGLKDRMSNTDLRDGTIQ
HHHHHHHHHCCCCCEEECCCCCEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEE
FVTFGLSGNYHDDLFFGALTTADVSITKGSLDEKIRDIHLSGAQGGYTRFNLELTRYQRF
EEEEECCCCCCCCEEEEEEEECEEEEECCCHHHHHHEEEECCCCCCEEEEEEEEHHHHHC
SEPCALDLTFSAQHTLKNLDSSDKFYLGGPYTVRAYPLGEAAGDHGALFKADLRHRIPVP
CCCEEEEEEECHHHHHHCCCCCCCEEECCCEEEEEEECCCCCCCCCCEEEEHHHHCCCCC
AEWGDMFVNAFYDVGHVTLNKDRYAGDSATMNATGSNDYWLQGAGVGLRYDISETFTLQG
CCHHHHHHHHHHHCCEEEECCCCCCCCCCEEECCCCCCEEEEECCCEEEEECCCEEEECC
CWAHTIGKNSGRAFDGNNSDGKSDNHRFWVQGLMNF
EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCC
>Mature Secondary Structure
MVPKIITSLVAGSVVFSASLQAAPLVPNAGSLQQQQRPAAVSKQFKQNVQADKKATEKSK
CCHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
PLAIKPSAEGKVFVKRFTFSGYEGTVSQDELQNMVKPYVGKQFSMEQLDAVSANITSELR
CEEECCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AKGWLALATLPPQDVTSGTVHVAINTGKAAMTSITSDGSIRICKRPLRQIAEKTCPPGSP
CCCEEEEEECCCCCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC
LNTNDQERAVLLMNDIPGIAATTSLSKGMQAGTTDVNYLIHEGALLSGVLWADNYGNRYT
CCCCCCCCEEEEEECCCCCEEHHHHHCCCCCCCCCHHHEEECCCHHEEEEEECCCCCCCC
GSLMQYAVLNINDPFHCGEQIMLNAAHSAGMWRGGANYSVPMPFLFAGLTGHAGVSGMQY
CCEEEEEEEECCCCCCCCCHHEEECHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHH
ELLEELEVLDYKGTSVKADAGFSYALHRSRKANLTSDVSYTYKGLKDRMSNTDLRDGTIQ
HHHHHHHHHCCCCCEEECCCCCEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEE
FVTFGLSGNYHDDLFFGALTTADVSITKGSLDEKIRDIHLSGAQGGYTRFNLELTRYQRF
EEEEECCCCCCCCEEEEEEEECEEEEECCCHHHHHHEEEECCCCCCEEEEEEEEHHHHHC
SEPCALDLTFSAQHTLKNLDSSDKFYLGGPYTVRAYPLGEAAGDHGALFKADLRHRIPVP
CCCEEEEEEECHHHHHHCCCCCCCEEECCCEEEEEEECCCCCCCCCCEEEEHHHHCCCCC
AEWGDMFVNAFYDVGHVTLNKDRYAGDSATMNATGSNDYWLQGAGVGLRYDISETFTLQG
CCHHHHHHHHHHHCCEEEECCCCCCCCCCEEECCCCCCEEEEECCCEEEEECCCEEEECC
CWAHTIGKNSGRAFDGNNSDGKSDNHRFWVQGLMNF
EEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]