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The map label for this gene is 78188970

Identifier: 78188970

GI number: 78188970

Start: 1343294

End: 1343671

Strand: Reverse

Name: 78188970

Synonym: Cag_1003

Alternate gene names: NA

Gene position: 1343671-1343294 (Counterclockwise)

Preceding gene: 78188971

Following gene: 78188959

Centisome position: 52.24

GC content: 60.05

Gene sequence:

>378_bases
ATGGTGCTGCCAGAGTCGCGCCCTTCGCGGGCGCGTGGATTGAAACCCCGCATCGGTAACCTCTTTACGGATGGAATGGA
GTCGCGCCCTTCGCGGGCGCGTGGATTGAAACTCGGTTATGCTGATCGCGCTGCGATTGAAGTGTTTGAGGTCGCGCCCT
TCGCGGGCGCGTGGATTGAAACGGCGGCTGAAGGTTTAAAAAAAAAGCCCGTTCAGCAAGTCGCGCCCTTCGCGGGCGCG
TGGATTGAAACACCCGAAGATGTTGACGATTACGAAAAAGCCGCGTCGCGCCCTTCGCGGGCGCGTGGATTGAAACACGT
AAGGTGCCAAAGCCAATCATCGGCGCTGTGTCGCGCCCTTCGCGGGCGCGTGGATTGA

Upstream 100 bases:

>100_bases
TGGATTGAAACCGCTATGCTAAAGCCGCATTTACCCCTCATAGTCAGTCGCGCCCTTCGCGGGCGCGTGGATTGAAACCA
ATAACAAAGCTGCTTGTGCA

Downstream 100 bases:

>100_bases
AACAATTTTTGCATCAAACTCTTCATCTGCTTTACCTGTCGCGCCCTTCGCGGGCGCGTGGATTGAAACTATAACCTTAA
AAGGTACGCAACAAGGTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MVLPESRPSRARGLKPRIGNLFTDGMESRPSRARGLKLGYADRAAIEVFEVAPFAGAWIETAAEGLKKKPVQQVAPFAGA
WIETPEDVDDYEKAASRPSRARGLKHVRCQSQSSALCRALRGRVD

Sequences:

>Translated_125_residues
MVLPESRPSRARGLKPRIGNLFTDGMESRPSRARGLKLGYADRAAIEVFEVAPFAGAWIETAAEGLKKKPVQQVAPFAGA
WIETPEDVDDYEKAASRPSRARGLKHVRCQSQSSALCRALRGRVD
>Mature_125_residues
MVLPESRPSRARGLKPRIGNLFTDGMESRPSRARGLKLGYADRAAIEVFEVAPFAGAWIETAAEGLKKKPVQQVAPFAGA
WIETPEDVDDYEKAASRPSRARGLKHVRCQSQSSALCRALRGRVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13706; Mature: 13706

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLPESRPSRARGLKPRIGNLFTDGMESRPSRARGLKLGYADRAAIEVFEVAPFAGAWIE
CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCHHHHH
TAAEGLKKKPVQQVAPFAGAWIETPEDVDDYEKAASRPSRARGLKHVRCQSQSSALCRAL
HHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHCHHHHHHCCHHHHHHHHH
RGRVD
HCCCC
>Mature Secondary Structure
MVLPESRPSRARGLKPRIGNLFTDGMESRPSRARGLKLGYADRAAIEVFEVAPFAGAWIE
CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCHHHHH
TAAEGLKKKPVQQVAPFAGAWIETPEDVDDYEKAASRPSRARGLKHVRCQSQSSALCRAL
HHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHCHHHHHHCCHHHHHHHHH
RGRVD
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA