| Definition | Chlorobium chlorochromatii CaD3 chromosome, complete genome. |
|---|---|
| Accession | NC_007514 |
| Length | 2,572,079 |
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The map label for this gene is 78188677
Identifier: 78188677
GI number: 78188677
Start: 973618
End: 974229
Strand: Reverse
Name: 78188677
Synonym: Cag_0701
Alternate gene names: NA
Gene position: 974229-973618 (Counterclockwise)
Preceding gene: 78188684
Following gene: 78188676
Centisome position: 37.88
GC content: 45.26
Gene sequence:
>612_bases ATGGAAAAACGTGATCTTAAAAAAGAGTTGCGCCATCTCTACAATCCATCGCCAAAAGCTGTTGAGATGGTTGATGTTCC CACCATGAACTTTTTGATGGTGGATGGTATGGGCGATCCAAATACATCGCAAACTTATGCGGATGCCATTGAAGCCCTCT TTTCGCTCTCCTACACGATCAAGTTTATGGTCAAAAAAGGAGAGATGGCATTGGATTATGGTGTTATGCCGCTTGAAAGC TTGTGGTGGTGTGAAGATATGTCAACCTTCTCACCTGATGACAAATCAAATTGGCAATGGAGAGCCATGATTATGCAACC ATCATGGATTACAGAGGATCTGGTGAACCAAGCAATTGAGGAAGTTAAGAGAAAAAAAGGGTTGGCGGCATTGCCATTCG TGCGGTTTGAAGCGTTTGAGGAAGGAGTTGCTGCCCAAATTATGCACATCGGGCATTTTGCGGAGGAGGCTCCAACTATT GAAAAGCTGCATCACTTTATTGCGGCAAACCAGAAGCAACGGCGAGGTAAGCACCACGAAATTTACCTGAGCGACATTCG TAAAGCCAAGCCTGAGGCATGGAAAACCATTATCCGTCAGCCCCTTGCATAA
Upstream 100 bases:
>100_bases GGAAGCTTTGTTGGTAGAGAGAGATTTACGGCGTTCAATAAGGTTTATCATCAAATATTACAATACGTTACCTCATTAAA AACCATTGGAGAATAATGCT
Downstream 100 bases:
>100_bases AAAGAGTATGCTCTCAAAGCATTCCTTACTTTTGGCTTGCAAGAGAAATTCAAACCGCTTATATTGGGACAATTTTAATC CACAATTAATAACCCAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MEKRDLKKELRHLYNPSPKAVEMVDVPTMNFLMVDGMGDPNTSQTYADAIEALFSLSYTIKFMVKKGEMALDYGVMPLES LWWCEDMSTFSPDDKSNWQWRAMIMQPSWITEDLVNQAIEEVKRKKGLAALPFVRFEAFEEGVAAQIMHIGHFAEEAPTI EKLHHFIAANQKQRRGKHHEIYLSDIRKAKPEAWKTIIRQPLA
Sequences:
>Translated_203_residues MEKRDLKKELRHLYNPSPKAVEMVDVPTMNFLMVDGMGDPNTSQTYADAIEALFSLSYTIKFMVKKGEMALDYGVMPLES LWWCEDMSTFSPDDKSNWQWRAMIMQPSWITEDLVNQAIEEVKRKKGLAALPFVRFEAFEEGVAAQIMHIGHFAEEAPTI EKLHHFIAANQKQRRGKHHEIYLSDIRKAKPEAWKTIIRQPLA >Mature_203_residues MEKRDLKKELRHLYNPSPKAVEMVDVPTMNFLMVDGMGDPNTSQTYADAIEALFSLSYTIKFMVKKGEMALDYGVMPLES LWWCEDMSTFSPDDKSNWQWRAMIMQPSWITEDLVNQAIEEVKRKKGLAALPFVRFEAFEEGVAAQIMHIGHFAEEAPTI EKLHHFIAANQKQRRGKHHEIYLSDIRKAKPEAWKTIIRQPLA
Specific function: Unknown
COG id: COG4832
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23512; Mature: 23512
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKRDLKKELRHLYNPSPKAVEMVDVPTMNFLMVDGMGDPNTSQTYADAIEALFSLSYTI CCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH KFMVKKGEMALDYGVMPLESLWWCEDMSTFSPDDKSNWQWRAMIMQPSWITEDLVNQAIE HEEEECCCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH EVKRKKGLAALPFVRFEAFEEGVAAQIMHIGHFAEEAPTIEKLHHFIAANQKQRRGKHHE HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCCCE IYLSDIRKAKPEAWKTIIRQPLA EHHHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure MEKRDLKKELRHLYNPSPKAVEMVDVPTMNFLMVDGMGDPNTSQTYADAIEALFSLSYTI CCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH KFMVKKGEMALDYGVMPLESLWWCEDMSTFSPDDKSNWQWRAMIMQPSWITEDLVNQAIE HEEEECCCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH EVKRKKGLAALPFVRFEAFEEGVAAQIMHIGHFAEEAPTIEKLHHFIAANQKQRRGKHHE HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHCCCCCE IYLSDIRKAKPEAWKTIIRQPLA EHHHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA