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The map label for this gene is arnT [H]

Identifier: 78188584

GI number: 78188584

Start: 709687

End: 711237

Strand: Reverse

Name: arnT [H]

Synonym: Cag_0606

Alternate gene names: 78188584

Gene position: 711237-709687 (Counterclockwise)

Preceding gene: 78188585

Following gene: 78188583

Centisome position: 27.65

GC content: 43.2

Gene sequence:

>1551_bases
ATGCCCCTACAAACGCAAAAGAACTCTAATCCCGCAGTGCAGCTTGCTGTGCTGGCTCTCCTTATTGGCGTTAGCTTTTT
TGCAACGCTTGGTGCTACTCCACTTTTTGATGTTGATGAAGGCGCTTTTAGCGAAGCAACTCGCGAAATGCTCATCAGCA
AAAATTACCTCACCACCTACCTTAATGGTGCTCCCCGCTTCGATAAACCTATTTTAATTTATTGGTTACAACTCCTCTCT
GTACAAATTTTAGGAATTAATGAAGTCGCCTTTCGTTTGCCCTCAGCCATAGCAAGTGCCGTGTGGGCGCTGCTGCTTTT
TTTCTTTGTAAAGAAAGAATCTGACTCGCAGCAAGCTTTGATAGCAAGTGGCTTGCTGGTGCTTTCGTTGCAAGTTAGTG
TGATTGCAAAGGCAGCTATTGCCGATGCTTTGTTGAATTGCTTGTTAGCGCTCTCCATGTTTGCCGTCATGCGCTATTAC
AAAAACAACTCAAAAACAGCCTTATTGACAGCTTTTGCCGCTATTGGGTTGGGCACGCTTACTAAAGGTCCAATTGCCAT
TATCATTCCACTTGCAGTAACCTTTTTGTTTTCAGTATTGGAAGGAACGCTTAAAAAGTGGTTCCGTATGGTTTTTTATC
TACCGGGCATTGCGCTTTTTTGTGTGATAGCGTTGCCATGGTATTTGCTTGAATATCAAGATCAAGGCATGGCTTTTATT
GAGGGCTTTTTCTTTAAGCACAACATTAGCCGCTTTAACACCTCCCTTGAAGGGCATTCAGGTTCGCTCTTTTACTATTT
CCCTGTGTTGATAGTGGGAATGATGCCATTTACCGCCCTGCTCTTTGCAACAATGTGGCGACTTCCCAAATTACTCTCAA
CGCCAACCAATCGCTTTTTGCTTATTTGGTTTGGCTTTGTCTTTATTTTTTTCTCCCTTTCGGGCACCAAGCTTCCCCAT
TACATGATTTACGGCTACACCCCGCTCTTTATTGTAATGGCTCGGATTGTGCCGCAACTCAAGCACCCAACTCGATTGGT
GATTTTGCCTGCACTGCTTTTGGTGCTGTTAGCTGCAACCCCCATGTTGGCGGAGCAAGCACTCCCAATGTTTGACGATC
TTTACATTCAGTCGTTGTTAATAGCTCTTGCTCAAGAAAGTGGCATGGAATGCACTATTGTTTCACTAACAACTTTGGCG
GCACTCATTATTATGCAACTCCCCCGAAAGTTATCCATCGAGGCAAAAATTTTAACAACGGGACTCTTTTTTTGCCTCTA
CATGAATGCTTACCTTGCGCCATTAGTAGGCTCAGTACTTCAGCAACCTATTAAAGAAGCCGCACTTCTTGCAAAGCAAC
AAGGCTATAAAGTGGTTATGTGGAAAACATATAATCCATCGTTTTTAGTATATTCAGAATCGTTGGTAGAAAAACGGCAG
CCACAAGCAGGCGATGTAGTACTTACCACCGTAAAACATATTGCCAAGCTAAATGTAACTACATTACTCTATAGCAAACA
TGGAATTGTGCTTGCTAAGGTGCCATACTAA

Upstream 100 bases:

>100_bases
ATTTTAACCCAGCATTACCTTAGCGATGTTATAGCTGGCTCCATTCTTGGCGCATTTTCAACGCTTTTATTGTATCACCA
CATTTTTAAAGCAACGCTTC

Downstream 100 bases:

>100_bases
TTTTTCTTTTTATAAAAAATGGAGCTTTCGGTTGTTATACCGTTAATGAATGAAGCGGATAATATTGAACCGCTTTTTTC
AGCACTTAATAAAGCGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MPLQTQKNSNPAVQLAVLALLIGVSFFATLGATPLFDVDEGAFSEATREMLISKNYLTTYLNGAPRFDKPILIYWLQLLS
VQILGINEVAFRLPSAIASAVWALLLFFFVKKESDSQQALIASGLLVLSLQVSVIAKAAIADALLNCLLALSMFAVMRYY
KNNSKTALLTAFAAIGLGTLTKGPIAIIIPLAVTFLFSVLEGTLKKWFRMVFYLPGIALFCVIALPWYLLEYQDQGMAFI
EGFFFKHNISRFNTSLEGHSGSLFYYFPVLIVGMMPFTALLFATMWRLPKLLSTPTNRFLLIWFGFVFIFFSLSGTKLPH
YMIYGYTPLFIVMARIVPQLKHPTRLVILPALLLVLLAATPMLAEQALPMFDDLYIQSLLIALAQESGMECTIVSLTTLA
ALIIMQLPRKLSIEAKILTTGLFFCLYMNAYLAPLVGSVLQQPIKEAALLAKQQGYKVVMWKTYNPSFLVYSESLVEKRQ
PQAGDVVLTTVKHIAKLNVTTLLYSKHGIVLAKVPY

Sequences:

>Translated_516_residues
MPLQTQKNSNPAVQLAVLALLIGVSFFATLGATPLFDVDEGAFSEATREMLISKNYLTTYLNGAPRFDKPILIYWLQLLS
VQILGINEVAFRLPSAIASAVWALLLFFFVKKESDSQQALIASGLLVLSLQVSVIAKAAIADALLNCLLALSMFAVMRYY
KNNSKTALLTAFAAIGLGTLTKGPIAIIIPLAVTFLFSVLEGTLKKWFRMVFYLPGIALFCVIALPWYLLEYQDQGMAFI
EGFFFKHNISRFNTSLEGHSGSLFYYFPVLIVGMMPFTALLFATMWRLPKLLSTPTNRFLLIWFGFVFIFFSLSGTKLPH
YMIYGYTPLFIVMARIVPQLKHPTRLVILPALLLVLLAATPMLAEQALPMFDDLYIQSLLIALAQESGMECTIVSLTTLA
ALIIMQLPRKLSIEAKILTTGLFFCLYMNAYLAPLVGSVLQQPIKEAALLAKQQGYKVVMWKTYNPSFLVYSESLVEKRQ
PQAGDVVLTTVKHIAKLNVTTLLYSKHGIVLAKVPY
>Mature_515_residues
PLQTQKNSNPAVQLAVLALLIGVSFFATLGATPLFDVDEGAFSEATREMLISKNYLTTYLNGAPRFDKPILIYWLQLLSV
QILGINEVAFRLPSAIASAVWALLLFFFVKKESDSQQALIASGLLVLSLQVSVIAKAAIADALLNCLLALSMFAVMRYYK
NNSKTALLTAFAAIGLGTLTKGPIAIIIPLAVTFLFSVLEGTLKKWFRMVFYLPGIALFCVIALPWYLLEYQDQGMAFIE
GFFFKHNISRFNTSLEGHSGSLFYYFPVLIVGMMPFTALLFATMWRLPKLLSTPTNRFLLIWFGFVFIFFSLSGTKLPHY
MIYGYTPLFIVMARIVPQLKHPTRLVILPALLLVLLAATPMLAEQALPMFDDLYIQSLLIALAQESGMECTIVSLTTLAA
LIIMQLPRKLSIEAKILTTGLFFCLYMNAYLAPLVGSVLQQPIKEAALLAKQQGYKVVMWKTYNPSFLVYSESLVEKRQP
QAGDVVLTTVKHIAKLNVTTLLYSKHGIVLAKVPY

Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 83 family [H]

Homologues:

Organism=Escherichia coli, GI1788591, Length=312, Percent_Identity=29.1666666666667, Blast_Score=102, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022839
- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: =2.4.2.43 [H]

Molecular weight: Translated: 57402; Mature: 57270

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCHHHHHHHHHHHHHHHHEEEECCCEEEEECCC
>Mature Secondary Structure 
PLQTQKNSNPAVQLAVLALLIGVSFFATLGATPLFDVDEGAFSEATREMLISKNYLTTY
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCHHHHHH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CCCCCHHHHHHHHHHHHHHHHEEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA