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The map label for this gene is 78188153

Identifier: 78188153

GI number: 78188153

Start: 190689

End: 191300

Strand: Reverse

Name: 78188153

Synonym: Cag_0170

Alternate gene names: NA

Gene position: 191300-190689 (Counterclockwise)

Preceding gene: 78188158

Following gene: 78188152

Centisome position: 7.44

GC content: 47.39

Gene sequence:

>612_bases
ATGCCGCTTCCTACCATTGTTTCACGCCATTTGCTGCCACAAGTGCTCAAGTTGCTCTACCGTAGCTTACGCATTTCGGT
TACTATGCCCAAGCATGGTTTACCGCAAGATGGGGGCATTGTGGCATTTTGGCACGGTAATATGATGGTTGGTTGGTTGC
TTGCAAAAAAGCTCTTTCCCCACAAAAACGTTGCTGCCGTTGTAAGCCAATCAGGCGACGGCACTATTTTAGCTGATGCT
TTGGGAACTCTTGGCTTTACGCTTATTCGTGGCTCCAGCTCAACGGATGGCGATATGGTGAAACAGCGTATGTATGAGCA
TGTGCAACAAGGGCAAATGGTAGCTATTACCCCCGATGGTCCTCGTGGTCCCAATCATCAATTTAAATATGGCACTATCA
GGCTTGCCTCCCGCCAACACATTCCGCTCCTTTTTGCTACTATTGGCTACAAGCGCTCATGGCAACTTGCAAGTTGGGAT
AGCTTTGCAATTCCCAAACCATTTAGCAAAGTTACCATAACGCTGCACATCCTCGCTATTCCCTTATTTACAAGTGAGGA
GGAATTGCGCCATTTTAGCACAACGCTTTCAGCCCGTTTTAGCCATGAGTAA

Upstream 100 bases:

>100_bases
CGGTTTTTGCGCTCCATCCTCCTCGTATTTCAAGCGCTCACGACGATTTTTCGAGATGCCTATAGAATCGAGATGTTTTT
AAGCATTGGATAACAACGCT

Downstream 100 bases:

>100_bases
TCCCCTGCGCCTTGCTTTTCGTCCTTTTGCCTTGCTCTACGAAGCAATTGTGCAAACTCGTAACCAGCTTTTTAATCGTG
CGGTATTAAGGGCATGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MPLPTIVSRHLLPQVLKLLYRSLRISVTMPKHGLPQDGGIVAFWHGNMMVGWLLAKKLFPHKNVAAVVSQSGDGTILADA
LGTLGFTLIRGSSSTDGDMVKQRMYEHVQQGQMVAITPDGPRGPNHQFKYGTIRLASRQHIPLLFATIGYKRSWQLASWD
SFAIPKPFSKVTITLHILAIPLFTSEEELRHFSTTLSARFSHE

Sequences:

>Translated_203_residues
MPLPTIVSRHLLPQVLKLLYRSLRISVTMPKHGLPQDGGIVAFWHGNMMVGWLLAKKLFPHKNVAAVVSQSGDGTILADA
LGTLGFTLIRGSSSTDGDMVKQRMYEHVQQGQMVAITPDGPRGPNHQFKYGTIRLASRQHIPLLFATIGYKRSWQLASWD
SFAIPKPFSKVTITLHILAIPLFTSEEELRHFSTTLSARFSHE
>Mature_202_residues
PLPTIVSRHLLPQVLKLLYRSLRISVTMPKHGLPQDGGIVAFWHGNMMVGWLLAKKLFPHKNVAAVVSQSGDGTILADAL
GTLGFTLIRGSSSTDGDMVKQRMYEHVQQGQMVAITPDGPRGPNHQFKYGTIRLASRQHIPLLFATIGYKRSWQLASWDS
FAIPKPFSKVTITLHILAIPLFTSEEELRHFSTTLSARFSHE

Specific function: Unknown

COG id: COG2121

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.pylori HP0270 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007172
- ProDom:   PD032436 [H]

Pfam domain/function: PF04028 DUF374 [H]

EC number: NA

Molecular weight: Translated: 22624; Mature: 22493

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLPTIVSRHLLPQVLKLLYRSLRISVTMPKHGLPQDGGIVAFWHGNMMVGWLLAKKLFP
CCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCC
HKNVAAVVSQSGDGTILADALGTLGFTLIRGSSSTDGDMVKQRMYEHVQQGQMVAITPDG
CCCEEEEEECCCCCEEHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCC
PRGPNHQFKYGTIRLASRQHIPLLFATIGYKRSWQLASWDSFAIPKPFSKVTITLHILAI
CCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCEEEEEEEEEE
PLFTSEEELRHFSTTLSARFSHE
EEECCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLPTIVSRHLLPQVLKLLYRSLRISVTMPKHGLPQDGGIVAFWHGNMMVGWLLAKKLFP
CCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHCC
HKNVAAVVSQSGDGTILADALGTLGFTLIRGSSSTDGDMVKQRMYEHVQQGQMVAITPDG
CCCEEEEEECCCCCEEHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCC
PRGPNHQFKYGTIRLASRQHIPLLFATIGYKRSWQLASWDSFAIPKPFSKVTITLHILAI
CCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCEECCCCCCCCCCCCCCEEEEEEEEEE
PLFTSEEELRHFSTTLSARFSHE
EEECCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]