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The map label for this gene is 78188068

Identifier: 78188068

GI number: 78188068

Start: 94409

End: 94738

Strand: Reverse

Name: 78188068

Synonym: Cag_0084

Alternate gene names: NA

Gene position: 94738-94409 (Counterclockwise)

Preceding gene: 78188069

Following gene: 78188059

Centisome position: 3.68

GC content: 41.21

Gene sequence:

>330_bases
ATGCCAAAGAATGATCTTACATATCAACCGGTTATACATAACCATGAAGAGTACCTTCGTGAGGAGCTAAAAGACGAAGA
GTTTCGCAAAGGGTATGAAGCTCTTGGTCCAACATACACTCTTATCAGAGAACTTCTTTTAGCTCGCCAACAGGCTGGAA
TGACGCAAGAGGCTGTTGCAGAAAAAATCGGTACGACAAAAAGCGCCGTTTCACGATTGGAATCTGCAGGAAAGCATGTT
CCATCACTCTCAACACTTAGAAAATATGCAGAAGCTGTTGGGTGCGAATTAGAAATTAAACTAACACCTAAAAAACAAGG
ATTTGCTTGA

Upstream 100 bases:

>100_bases
GGTAAACGCATCGTGATTCTTCATACCTTTATAAAAAAAACACAAACGACACCACAAAGAGAGCTTGATAAAGCACGTCA
ACGAATGAAGGAGGTAATCA

Downstream 100 bases:

>100_bases
TTTACAAGAAGCAAAACACCCCAACAAGCTCAATGCTCACTCTCTTTTGAAGAGGTCTCAATAAACTCAACAAAGGTTAA
TCCAATTGTGCCACCACTTC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Phage-Like Regulator Protein; XRE Family Helix-Turn-Helix Transcriptional Regulator

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MPKNDLTYQPVIHNHEEYLREELKDEEFRKGYEALGPTYTLIRELLLARQQAGMTQEAVAEKIGTTKSAVSRLESAGKHV
PSLSTLRKYAEAVGCELEIKLTPKKQGFA

Sequences:

>Translated_109_residues
MPKNDLTYQPVIHNHEEYLREELKDEEFRKGYEALGPTYTLIRELLLARQQAGMTQEAVAEKIGTTKSAVSRLESAGKHV
PSLSTLRKYAEAVGCELEIKLTPKKQGFA
>Mature_108_residues
PKNDLTYQPVIHNHEEYLREELKDEEFRKGYEALGPTYTLIRELLLARQQAGMTQEAVAEKIGTTKSAVSRLESAGKHVP
SLSTLRKYAEAVGCELEIKLTPKKQGFA

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12290; Mature: 12159

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKNDLTYQPVIHNHEEYLREELKDEEFRKGYEALGPTYTLIRELLLARQQAGMTQEAVA
CCCCCCCCCCHHCCHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH
EKIGTTKSAVSRLESAGKHVPSLSTLRKYAEAVGCELEIKLTPKKQGFA
HHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCC
>Mature Secondary Structure 
PKNDLTYQPVIHNHEEYLREELKDEEFRKGYEALGPTYTLIRELLLARQQAGMTQEAVA
CCCCCCCCCHHCCHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHH
EKIGTTKSAVSRLESAGKHVPSLSTLRKYAEAVGCELEIKLTPKKQGFA
HHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA