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The map label for this gene is yfiH [C]

Identifier: 78188045

GI number: 78188045

Start: 71235

End: 72002

Strand: Reverse

Name: yfiH [C]

Synonym: Cag_0061

Alternate gene names: 78188045

Gene position: 72002-71235 (Counterclockwise)

Preceding gene: 78188054

Following gene: 78188030

Centisome position: 2.8

GC content: 47.14

Gene sequence:

>768_bases
ATGCAGCTCGCAGGTTACGTTACACCCCAAATATTTAGTGCATTTCCTGAACTTGTAGCAATACAAAGTACACGAGTGGG
AGGGGTAAGTTCGGGGGCATTTGCCAGCTTAAACGTTGGACATAATACAACCGATAACCCAACATGCGTGTTGGAAAATC
GAGAACGTTTGTGCGCAGCGCTTGGCATTGAGTACCAAAACCTTGTAACGGCAGATCAAGTGCATGGTACCAATATTTAT
GTGGCTTATGAAGCTGGCCATTATTCTGGGTACGATGCCTTCATTACCAATCAGCCAAATCGCTATCTTTGCATTTTTAC
GGCTGATTGCTATCCCGTACTGCTTTACGATCCTCACCATAAAGCCGTTGCGGCTATTCATGCTGGCTGGAAAGGCAGTG
CTGGCAAAATTGTTCTTAAAACCCTTCACGCTATGCAAACCCACTTTGGGACTGTACCCGGCAATTGCTTGGCGTATATT
GGGGCTGGAATCTCAGGATCGGCTTATGAAGTCGGCATGGATGTTGCCCACCATTTTGCCAACGATGTGCTGTGCAGTGG
TTGCGCCATAGAGGGAACAAACGAGCATAAAGCACTGCTTGACCTTCGTAAAGAAAATTATCGTCAATTGCTTGAGGCGG
GTATTCCCTCTATGCACATTGAGCAATCCCCCTACTGCACCTTTCGTGAGAGCGATCTCTTTTTTTCATACCGTCGCGAT
AACGGCGTTACAGGGCGCATGGTTGCTCTAATTGGTTTACGCCATTAG

Upstream 100 bases:

>100_bases
AAGAGTAATCTACCTATCACAATAAATTGGAAGGAAAGATACTATTCCACTTTACGAAACCAGCATTAAAAGATTTTTCC
TCACAAAAACACTCATCACC

Downstream 100 bases:

>100_bases
AGCAACTCCATACACCTCATTACTTCAGGAAATCACTCGACAATGAGAAGAGCGTAACTAAAGCGTTTCGCAACTTTTTG
CACCATACACAGCATAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MQLAGYVTPQIFSAFPELVAIQSTRVGGVSSGAFASLNVGHNTTDNPTCVLENRERLCAALGIEYQNLVTADQVHGTNIY
VAYEAGHYSGYDAFITNQPNRYLCIFTADCYPVLLYDPHHKAVAAIHAGWKGSAGKIVLKTLHAMQTHFGTVPGNCLAYI
GAGISGSAYEVGMDVAHHFANDVLCSGCAIEGTNEHKALLDLRKENYRQLLEAGIPSMHIEQSPYCTFRESDLFFSYRRD
NGVTGRMVALIGLRH

Sequences:

>Translated_255_residues
MQLAGYVTPQIFSAFPELVAIQSTRVGGVSSGAFASLNVGHNTTDNPTCVLENRERLCAALGIEYQNLVTADQVHGTNIY
VAYEAGHYSGYDAFITNQPNRYLCIFTADCYPVLLYDPHHKAVAAIHAGWKGSAGKIVLKTLHAMQTHFGTVPGNCLAYI
GAGISGSAYEVGMDVAHHFANDVLCSGCAIEGTNEHKALLDLRKENYRQLLEAGIPSMHIEQSPYCTFRESDLFFSYRRD
NGVTGRMVALIGLRH
>Mature_255_residues
MQLAGYVTPQIFSAFPELVAIQSTRVGGVSSGAFASLNVGHNTTDNPTCVLENRERLCAALGIEYQNLVTADQVHGTNIY
VAYEAGHYSGYDAFITNQPNRYLCIFTADCYPVLLYDPHHKAVAAIHAGWKGSAGKIVLKTLHAMQTHFGTVPGNCLAYI
GAGISGSAYEVGMDVAHHFANDVLCSGCAIEGTNEHKALLDLRKENYRQLLEAGIPSMHIEQSPYCTFRESDLFFSYRRD
NGVTGRMVALIGLRH

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=240, Percent_Identity=26.25, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI190194372, Length=240, Percent_Identity=26.25, Blast_Score=81, Evalue=9e-16,
Organism=Escherichia coli, GI1788945, Length=248, Percent_Identity=35.8870967741936, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 27805; Mature: 27805

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLAGYVTPQIFSAFPELVAIQSTRVGGVSSGAFASLNVGHNTTDNPTCVLENRERLCAA
CCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEECCHHHHHHH
LGIEYQNLVTADQVHGTNIYVAYEAGHYSGYDAFITNQPNRYLCIFTADCYPVLLYDPHH
HCCCHHHCEEHHHCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCC
KAVAAIHAGWKGSAGKIVLKTLHAMQTHFGTVPGNCLAYIGAGISGSAYEVGMDVAHHFA
CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHH
NDVLCSGCAIEGTNEHKALLDLRKENYRQLLEAGIPSMHIEQSPYCTFRESDLFFSYRRD
HHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCEEEEEECC
NGVTGRMVALIGLRH
CCCCEEEEEEEECCC
>Mature Secondary Structure
MQLAGYVTPQIFSAFPELVAIQSTRVGGVSSGAFASLNVGHNTTDNPTCVLENRERLCAA
CCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEECCHHHHHHH
LGIEYQNLVTADQVHGTNIYVAYEAGHYSGYDAFITNQPNRYLCIFTADCYPVLLYDPHH
HCCCHHHCEEHHHCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCC
KAVAAIHAGWKGSAGKIVLKTLHAMQTHFGTVPGNCLAYIGAGISGSAYEVGMDVAHHFA
CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCCHHHHHHHHHHHHH
NDVLCSGCAIEGTNEHKALLDLRKENYRQLLEAGIPSMHIEQSPYCTFRESDLFFSYRRD
HHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCEEEEEECC
NGVTGRMVALIGLRH
CCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]