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The map label for this gene is 78188025

Identifier: 78188025

GI number: 78188025

Start: 45345

End: 46718

Strand: Reverse

Name: 78188025

Synonym: Cag_0041

Alternate gene names: NA

Gene position: 46718-45345 (Counterclockwise)

Preceding gene: 78188026

Following gene: 78188024

Centisome position: 1.82

GC content: 54.44

Gene sequence:

>1374_bases
ATGAAACAAAACATCTCCTTTCATAAAAAAATAAGCGCAACCTCCTTAGCGCTTTTGCTTGCAACATCTTCCATGAGCTA
TGCCGTGGAGCCAACCTCTTCGCCATCTACCGCATTTGCCGCGCCATCCGTAACACCTCTGACGCCCCTTACGTTAGCAC
AAGCGCTACAAAAAATGCAGGCGCATTATCCCGCGTTACACGCTGCAAGCGAAGAGGTGATGGCGGCTGACGCGCGTGTG
CGCCAAAGCAAAAGCAGCTTTCTGCCGCAGGTTACCGCTAATGCGGGCTATCTTTGGCGCGATCCCGTTTCGGAAATGAG
TTTTGGTGGTGGCACGCCCATGCAGTTTATGCCGCACAACAACTACCATGCAACGGTTAGCGCCGAGGCGATTCTTTTTG
ATTTTGGGAAGCGCAGCCGCGAGTTAGCACTTGCCCAAAGTGGTACGCGCACGGCAGAGGAGCAAGTAGCGTTAAGCCGT
CGTGAAGCGGCATGGCAGGTGGTGCAGCTTTTTTACGGAATACTCTTTTTGCAAGAAGAGCAGCGTGTGCAGCAAAAAGA
GTTCCAAGCGCTGAACAAAGCGTTGGAGTTTACCACCAAGCGGTATCAAGCAGGCACGGCAACCTCGTTTGACCTTGCTA
CCACGAAAGCGCGCCTTGCCGCATTGCAAAGCCGTATGGCTGACAGTGCTCATGCGTTGGAACGGAGCGAAATGCACTTT
TGCCGTTTAACGGAAATGAATGCAACGCAGCCGCTTGCCTTGCAAGGCAGCTTGATGGCATCGGTTGCACCATCAAGCAA
TCAAGCGCAGTTAACCGAGCAAGCGCTAAAAAATCGGGTTGAAACTCGCTTAGCGCGTGAAGCCGAAGCGGCGGCGGGGC
AGCGTCAAGCACTTGCGAGCAAGGGTGGTGCGCCACAGCTTCGGGGCAATGTGGCGTATGGCGTTGCTAACGGTTATCAG
CCCGATATTGATGAAATTCGCACCACGCTTAGTGCAGGCGTTACGCTTGATGTGCCCATTTTTAGCGGCTTTCGCACCAC
TGCTCGTCAGCAAGAGAGTGCGGCGGCTTTGCGGGCTGCAACCCAGCGTCGGTTAGATGCCGAAGCACAAGCGGCTACCG
AAGTGGCAGAGTTGCTTAATGCGTTGCAGCACAATGGTGAAAAGCTGAACGCAACCGCAATGCAAGCCGAGCAAGCCTCT
TTAGCCGCAAGCCATGCACGGGCGCGTTACGAAAATGGCATGGCAACCACGCTTGATTTGCTTGATACCGAAGCGGCGCT
TTCGCAAGCGGAACTGGCTCGTTTGCAAGCGGCATATGCGGTAACGCTAAATCGCTATGCGCTGCAACGAGCAACGGGCG
AGGTGTTCTGGTAA

Upstream 100 bases:

>100_bases
ACATTCATGCAGGCGCAAAAAGAAAATCTGCAATGAAAAGCTTTTTGGCATAAAAGTTGTTAACCTTGATATAAGCTTCA
GAGAAATCTATTCCCTATCC

Downstream 100 bases:

>100_bases
ACCACTCAATTTGGATTGAGCCTGAATAATTCATTGAATCTTTTGCCTTTTTGTCATTCCCGCGCAAGCGGGAATCCAGA
AAGAATCTGAATAAATCCGA

Product: outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MKQNISFHKKISATSLALLLATSSMSYAVEPTSSPSTAFAAPSVTPLTPLTLAQALQKMQAHYPALHAASEEVMAADARV
RQSKSSFLPQVTANAGYLWRDPVSEMSFGGGTPMQFMPHNNYHATVSAEAILFDFGKRSRELALAQSGTRTAEEQVALSR
REAAWQVVQLFYGILFLQEEQRVQQKEFQALNKALEFTTKRYQAGTATSFDLATTKARLAALQSRMADSAHALERSEMHF
CRLTEMNATQPLALQGSLMASVAPSSNQAQLTEQALKNRVETRLAREAEAAAGQRQALASKGGAPQLRGNVAYGVANGYQ
PDIDEIRTTLSAGVTLDVPIFSGFRTTARQQESAAALRAATQRRLDAEAQAATEVAELLNALQHNGEKLNATAMQAEQAS
LAASHARARYENGMATTLDLLDTEAALSQAELARLQAAYAVTLNRYALQRATGEVFW

Sequences:

>Translated_457_residues
MKQNISFHKKISATSLALLLATSSMSYAVEPTSSPSTAFAAPSVTPLTPLTLAQALQKMQAHYPALHAASEEVMAADARV
RQSKSSFLPQVTANAGYLWRDPVSEMSFGGGTPMQFMPHNNYHATVSAEAILFDFGKRSRELALAQSGTRTAEEQVALSR
REAAWQVVQLFYGILFLQEEQRVQQKEFQALNKALEFTTKRYQAGTATSFDLATTKARLAALQSRMADSAHALERSEMHF
CRLTEMNATQPLALQGSLMASVAPSSNQAQLTEQALKNRVETRLAREAEAAAGQRQALASKGGAPQLRGNVAYGVANGYQ
PDIDEIRTTLSAGVTLDVPIFSGFRTTARQQESAAALRAATQRRLDAEAQAATEVAELLNALQHNGEKLNATAMQAEQAS
LAASHARARYENGMATTLDLLDTEAALSQAELARLQAAYAVTLNRYALQRATGEVFW
>Mature_457_residues
MKQNISFHKKISATSLALLLATSSMSYAVEPTSSPSTAFAAPSVTPLTPLTLAQALQKMQAHYPALHAASEEVMAADARV
RQSKSSFLPQVTANAGYLWRDPVSEMSFGGGTPMQFMPHNNYHATVSAEAILFDFGKRSRELALAQSGTRTAEEQVALSR
REAAWQVVQLFYGILFLQEEQRVQQKEFQALNKALEFTTKRYQAGTATSFDLATTKARLAALQSRMADSAHALERSEMHF
CRLTEMNATQPLALQGSLMASVAPSSNQAQLTEQALKNRVETRLAREAEAAAGQRQALASKGGAPQLRGNVAYGVANGYQ
PDIDEIRTTLSAGVTLDVPIFSGFRTTARQQESAAALRAATQRRLDAEAQAATEVAELLNALQHNGEKLNATAMQAEQAS
LAASHARARYENGMATTLDLLDTEAALSQAELARLQAAYAVTLNRYALQRATGEVFW

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49501; Mature: 49501

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNISFHKKISATSLALLLATSSMSYAVEPTSSPSTAFAAPSVTPLTPLTLAQALQKMQ
CCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AHYPALHAASEEVMAADARVRQSKSSFLPQVTANAGYLWRDPVSEMSFGGGTPMQFMPHN
HHCCHHHHCHHHHHHHHHHHHHHHHHCCCEECCCCCCEECCCHHHCCCCCCCCCEEECCC
NYHATVSAEAILFDFGKRSRELALAQSGTRTAEEQVALSRREAAWQVVQLFYGILFLQEE
CEEEEEEHHEHEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRVQQKEFQALNKALEFTTKRYQAGTATSFDLATTKARLAALQSRMADSAHALERSEMHF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
CRLTEMNATQPLALQGSLMASVAPSSNQAQLTEQALKNRVETRLAREAEAAAGQRQALAS
EEEECCCCCCCEEECCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGGAPQLRGNVAYGVANGYQPDIDEIRTTLSAGVTLDVPIFSGFRTTARQQESAAALRAA
CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHH
TQRRLDAEAQAATEVAELLNALQHNGEKLNATAMQAEQASLAASHARARYENGMATTLDL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LDTEAALSQAELARLQAAYAVTLNRYALQRATGEVFW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKQNISFHKKISATSLALLLATSSMSYAVEPTSSPSTAFAAPSVTPLTPLTLAQALQKMQ
CCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AHYPALHAASEEVMAADARVRQSKSSFLPQVTANAGYLWRDPVSEMSFGGGTPMQFMPHN
HHCCHHHHCHHHHHHHHHHHHHHHHHCCCEECCCCCCEECCCHHHCCCCCCCCCEEECCC
NYHATVSAEAILFDFGKRSRELALAQSGTRTAEEQVALSRREAAWQVVQLFYGILFLQEE
CEEEEEEHHEHEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRVQQKEFQALNKALEFTTKRYQAGTATSFDLATTKARLAALQSRMADSAHALERSEMHF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
CRLTEMNATQPLALQGSLMASVAPSSNQAQLTEQALKNRVETRLAREAEAAAGQRQALAS
EEEECCCCCCCEEECCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGGAPQLRGNVAYGVANGYQPDIDEIRTTLSAGVTLDVPIFSGFRTTARQQESAAALRAA
CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHH
TQRRLDAEAQAATEVAELLNALQHNGEKLNATAMQAEQASLAASHARARYENGMATTLDL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LDTEAALSQAELARLQAAYAVTLNRYALQRATGEVFW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA