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The map label for this gene is pyrF [H]

Identifier: 78187990

GI number: 78187990

Start: 7276

End: 8118

Strand: Reverse

Name: pyrF [H]

Synonym: Cag_0006

Alternate gene names: 78187990

Gene position: 8118-7276 (Counterclockwise)

Preceding gene: 78187996

Following gene: 78187989

Centisome position: 0.32

GC content: 47.81

Gene sequence:

>843_bases
ATGAGTAACGCCCGCAATAAAGCTAACGCTCGCCTGCAAAGTTTACAATCGCTCCTTTGCGTTGGGCTTGATAGCGATTT
GGCAAAAATTCCCGAACCTTTTGCCTCTTTACCAAATCCCGTTGTTGCCTTTAACCGTTCCATTATTCGCGCCACGGCAG
CATATGCTGTTGCCTATAAAATTAATACGGCGTTTTATGAGGCGTATGGAATTGCTGGATTGCAAGCAATGGAAGAGACA
TTGGCAATGATTCCCGATAATTGCCTCTCTATTGCTGATGCAAAGCGTGGCGATATTGGCAACACCAGCGCAATGTATGC
AAAAGCTTTTTTTGAGCATTGGAATTTTGATGCCCTAACGGTTGCCCCTTATATGGGCAGTGATTCGCTTGAACCTTTTT
TTGCGTATGAAGAAAAGCTCATTTTTGTGCTGGGGCTTACCTCCAATGCAGGCTCTGCCGATTTTGAGGAGCAACGCTTG
CAATCAGGGCAACCATTGTACGAGAGAGTTATTGAGCGCACACGCCAATGGAGTAGGAACGGAAATGGTGGCGTGGTGGT
TGGTGCTACCAAAAGTTCGCAATTGGCGGCTTTGCGCACAGAAGCACCCGACCTTTTTATGTTAATACCGGGCGTTGGTG
CACAAGGCGGTTCACTTGAAGAGGCGGTAACGTGTGGGGTTGATGCCGAACGCCAAAACGCCATTATTAACGTCAGCCGT
GCCCTCATTTATCCACCTGCTCCCCGTGCATCGGGTTTTGCTTCGGTAGAGGAGTATGAGCAAACAGTTTCAGCAATTGC
TATGGAATTAGCGCAAAGCATGAAACAAGCTTTGCAAGGCTGA

Upstream 100 bases:

>100_bases
ATTGCTTCGCTTTTTTAGCGATGCTCTTAAGCAGCATAAATTCCACGAAAGAACGCCAATGTACGGGATTCTTTCTGTTT
TTAATAAAAGCATATAACCT

Downstream 100 bases:

>100_bases
TTTGCAGAAAGAATACTCTATAAAAGTCATTTTTGTTGTCATTCCCGCGAAAGCGGGAATCCATTAAATGTTTATTTAGC
AATAAATAACCGATGTACTA

Product: orotidine 5'-phosphate decarboxylase subfamily protein

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSNARNKANARLQSLQSLLCVGLDSDLAKIPEPFASLPNPVVAFNRSIIRATAAYAVAYKINTAFYEAYGIAGLQAMEET
LAMIPDNCLSIADAKRGDIGNTSAMYAKAFFEHWNFDALTVAPYMGSDSLEPFFAYEEKLIFVLGLTSNAGSADFEEQRL
QSGQPLYERVIERTRQWSRNGNGGVVVGATKSSQLAALRTEAPDLFMLIPGVGAQGGSLEEAVTCGVDAERQNAIINVSR
ALIYPPAPRASGFASVEEYEQTVSAIAMELAQSMKQALQG

Sequences:

>Translated_280_residues
MSNARNKANARLQSLQSLLCVGLDSDLAKIPEPFASLPNPVVAFNRSIIRATAAYAVAYKINTAFYEAYGIAGLQAMEET
LAMIPDNCLSIADAKRGDIGNTSAMYAKAFFEHWNFDALTVAPYMGSDSLEPFFAYEEKLIFVLGLTSNAGSADFEEQRL
QSGQPLYERVIERTRQWSRNGNGGVVVGATKSSQLAALRTEAPDLFMLIPGVGAQGGSLEEAVTCGVDAERQNAIINVSR
ALIYPPAPRASGFASVEEYEQTVSAIAMELAQSMKQALQG
>Mature_279_residues
SNARNKANARLQSLQSLLCVGLDSDLAKIPEPFASLPNPVVAFNRSIIRATAAYAVAYKINTAFYEAYGIAGLQAMEETL
AMIPDNCLSIADAKRGDIGNTSAMYAKAFFEHWNFDALTVAPYMGSDSLEPFFAYEEKLIFVLGLTSNAGSADFEEQRLQ
SGQPLYERVIERTRQWSRNGNGGVVVGATKSSQLAALRTEAPDLFMLIPGVGAQGGSLEEAVTCGVDAERQNAIINVSRA
LIYPPAPRASGFASVEEYEQTVSAIAMELAQSMKQALQG

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 30150; Mature: 30019

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNARNKANARLQSLQSLLCVGLDSDLAKIPEPFASLPNPVVAFNRSIIRATAAYAVAYK
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHEEEE
INTAFYEAYGIAGLQAMEETLAMIPDNCLSIADAKRGDIGNTSAMYAKAFFEHWNFDALT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEE
VAPYMGSDSLEPFFAYEEKLIFVLGLTSNAGSADFEEQRLQSGQPLYERVIERTRQWSRN
EECCCCCCCCCHHHHHCCEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCC
GNGGVVVGATKSSQLAALRTEAPDLFMLIPGVGAQGGSLEEAVTCGVDAERQNAIINVSR
CCCCEEEEECCCCCHHHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCCCHHCCCEEEEEH
ALIYPPAPRASGFASVEEYEQTVSAIAMELAQSMKQALQG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNARNKANARLQSLQSLLCVGLDSDLAKIPEPFASLPNPVVAFNRSIIRATAAYAVAYK
CCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHEEEE
INTAFYEAYGIAGLQAMEETLAMIPDNCLSIADAKRGDIGNTSAMYAKAFFEHWNFDALT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEE
VAPYMGSDSLEPFFAYEEKLIFVLGLTSNAGSADFEEQRLQSGQPLYERVIERTRQWSRN
EECCCCCCCCCHHHHHCCEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCC
GNGGVVVGATKSSQLAALRTEAPDLFMLIPGVGAQGGSLEEAVTCGVDAERQNAIINVSR
CCCCEEEEECCCCCHHHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCCCHHCCCEEEEEH
ALIYPPAPRASGFASVEEYEQTVSAIAMELAQSMKQALQG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA