Click here to switch to the map view.

The map label for this gene is oxaA

Identifier: 78067989

GI number: 78067989

Start: 3691152

End: 3692819

Strand: Reverse

Name: oxaA

Synonym: Bcep18194_A6520

Alternate gene names: 78067989

Gene position: 3692819-3691152 (Counterclockwise)

Preceding gene: 78067990

Following gene: 161702952

Centisome position: 99.96

GC content: 63.85

Gene sequence:

>1668_bases
ATGGATATCAAACGCACCGTCCTATGGGTGATCTTCTTCATGTCAGCTGTCATGCTGTACGACAACTGGCAGCGGTCCCA
TGGACGCCCGTCGATGTTCTTCCCGAGTGCCACGCAGACGGCCCCCGCGGCCGCTGCCGGCGGTGCATCGGGCACGGGCG
CGACGACGACGACCGCAGGTGAAGTGCCTGCCGCCGCAGCCGGCGCCGCACCGTCGACGACGGCACCGGCCGCCCAGGCG
CAGCTCGTGAAGTTCTCGACCGACGTGTATGACGGCGAAATCGACACGCGCGGCGGCACGCTCGCGAAGCTGACGCTGAA
GAAGCAGGGCGACGGCAAGCAGCCCGACCTGTACATCACGCTGTTCGACCACACGGCCGGCCACACGTATCTCGCACGCT
CGGGCCTGCTCGGCGGCGATTTCCCGAACCACAACGACGTCTACACGCAGCTGAATCCGGGCACGACGTCGCTGACGGGT
GACCAGAACGCGCTGAAGCTGTCGTTCGAATCGCCGGTGAAGGGCGGCGTGAAGGTCGTGAAGACCTACACGTTCACGCG
CGGCAGCTACGTGATCGGCGTCGACACCAAGATCGACAACGTCGGCACGGCGCCTGTCACGCCGACGGTCTACATGGAAC
TGGTGCGCGACAACACGGCCGTCGAAACGCCGATGTTCTCGCACACGTTCCTCGGGCCGGCGGTCTACACGGACGCGAAG
CACTTCCAGAAGATCAACTTCAGCGACCTCGACAAGAACAAGGCCGACTACGTGACCTCCGCCGACAACGGCTGGGTCGC
GATGGTGCAGCACTACTTCGCGTCGGCGTGGATTCCGCAGCAGGGCGTGAAGCGCGACATCTACGCTGAAAAGATCGATC
CGACGCTGTACCGCGTCGGCGTGAAGCAGCCGGTCGCCGCGATCGCGCCGGGCCAGTCGGCCGACGTGCAGGCCCGCCTG
TTCGCCGGTCCGGAAGAAGAGCGCATGCTCGAAGGCATCGCGCCGGGCCTGGAACTCGTGAAGGACTACGGCTGGGTGAC
GATCATCGCGAAGCCGCTGTTCTGGCTGCTCGAGAAGATCCACAGCTACATCGGCAACTGGGGCTGGTCGATCGTGCTGC
TCACGCTGCTGATCAAGGCCGTGTTCTTCCCGCTGTCGGCTGCGAGCTACAAGTCGATGGCGCGCATGAAGGAAATCACG
CCGCGCATGCAGGCGCTGCGCGAACGCTTCAAGAGCGATCCGCAGAAGATGAACTCGGCGCTGATGGAGCTGTACAAGAC
CGAGAAGGTCAATCCGTTCGGCGGCTGCCTGCCGGTCGTGATCCAGATCCCGGTGTTCATCTCGCTGTACTGGGTGCTGC
TGGCCTCGGTCGAAATGCGCGGCGCGCCGTGGGTTCTGTGGATTCACGACCTGTCGCAGCGCGATCCGTTCTTCATCCTG
CCGGTGCTGATGGCCGTGTCGATGTACGTGCAGACGAGCCTGAACCCGACCCCGCCGGACCCCGTCCAGGCGAAGATGAT
GAAGTTCATGCCGATCGCGTTCTCGGTGATGTTCTTCTTCTTCCCGGCCGGCCTCGTGCTGTACTACGTCGTGAACAACG
TGCTGTCGATCGCACAGCAGTACTACATCACGCGCAAGCTCGGCGGGGCCAAGAAGAAACCGGCCTGA

Upstream 100 bases:

>100_bases
CGTTTTCCGCGGGCGGCATCGACCTCGTCCCGCCGCCCAACTCCGACACTCGCGCTCGCGGCGAAGCCGACGCGCGGTCC
CATCGACTCTGAGACAACGC

Downstream 100 bases:

>100_bases
CGCCCGTTGCATACGTGGGGCGAGATGTTCGCCCCGCGATGCACGAAAAAAGCCGCATGGTTCGCCCATGCGGCTTTTTG
CTTTTTGCGGGTCAGGGCGG

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAAGGASGTGATTTTAGEVPAAAAGAAPSTTAPAAQA
QLVKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPDLYITLFDHTAGHTYLARSGLLGGDFPNHNDVYTQLNPGTTSLTG
DQNALKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAK
HFQKINFSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQQGVKRDIYAEKIDPTLYRVGVKQPVAAIAPGQSADVQARL
FAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHSYIGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKEIT
PRMQALRERFKSDPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPFFIL
PVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGAKKKPA

Sequences:

>Translated_555_residues
MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAAGGASGTGATTTTAGEVPAAAAGAAPSTTAPAAQA
QLVKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPDLYITLFDHTAGHTYLARSGLLGGDFPNHNDVYTQLNPGTTSLTG
DQNALKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAK
HFQKINFSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQQGVKRDIYAEKIDPTLYRVGVKQPVAAIAPGQSADVQARL
FAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHSYIGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKEIT
PRMQALRERFKSDPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPFFIL
PVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGAKKKPA
>Mature_555_residues
MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAAGGASGTGATTTTAGEVPAAAAGAAPSTTAPAAQA
QLVKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPDLYITLFDHTAGHTYLARSGLLGGDFPNHNDVYTQLNPGTTSLTG
DQNALKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAK
HFQKINFSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQQGVKRDIYAEKIDPTLYRVGVKQPVAAIAPGQSADVQARL
FAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHSYIGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKEIT
PRMQALRERFKSDPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPFFIL
PVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGAKKKPA

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1790140, Length=496, Percent_Identity=38.3064516129032, Blast_Score=365, Evalue=1e-102,
Organism=Drosophila melanogaster, GI24662345, Length=204, Percent_Identity=26.9607843137255, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI21356443, Length=204, Percent_Identity=26.9607843137255, Blast_Score=73, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_BURS3 (Q39BQ2)

Other databases:

- EMBL:   CP000151
- RefSeq:   YP_370758.1
- ProteinModelPortal:   Q39BQ2
- SMR:   Q39BQ2
- STRING:   Q39BQ2
- GeneID:   3751755
- GenomeReviews:   CP000151_GR
- KEGG:   bur:Bcep18194_A6520
- NMPDR:   fig|269483.3.peg.7338
- eggNOG:   COG0706
- HOGENOM:   HBG507812
- OMA:   TYRGAAF
- ProtClustDB:   PRK01318
- BioCyc:   BSP36773:BCEP18194_A6520-MONOMER
- HAMAP:   MF_01810
- InterPro:   IPR019998
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- PRINTS:   PR00701
- PRINTS:   PR01900
- TIGRFAMs:   TIGR03593
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 61098; Mature: 61098

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe7b62c0)-; HASH(0x12f342dc)-; HASH(0x12f5ff54)-; HASH(0x12f3c9fc)-; HASH(0x12a39408)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAAGGASGTGATTTTAG
CCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEECCCCCCCCCCHHCCCCCCCCCCCCCCC
EVPAAAAGAAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPDLYIT
CCCCHHCCCCCCCCCCHHHHHHHEEECCCCCCEEECCCCEEEEEEEEECCCCCCCCEEEE
LFDHTAGHTYLARSGLLGGDFPNHNDVYTQLNPGTTSLTGDQNALKLSFESPVKGGVKVV
EEECCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCEECCCCCEEEEEECCCCCCCEEEE
KTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAK
EEEEEECCCEEEEECCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCHH
HFQKINFSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQQGVKRDIYAEKIDPTLYRVG
HHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHEECC
VKQPVAAIAPGQSADVQARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKI
CCCCHHHCCCCCCCCCEEEEECCCCHHHHHHHHCHHHHHHHHCCHHEEHHHHHHHHHHHH
HSYIGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNSA
HHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPFFIL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHH
PVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYITRKLGGAKKKPA
HHHHHHHCCCCCCCH
>Mature Secondary Structure
MDIKRTVLWVIFFMSAVMLYDNWQRSHGRPSMFFPSATQTAPAAAAGGASGTGATTTTAG
CCHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEECCCCCCCCCCHHCCCCCCCCCCCCCCC
EVPAAAAGAAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPDLYIT
CCCCHHCCCCCCCCCCHHHHHHHEEECCCCCCEEECCCCEEEEEEEEECCCCCCCCEEEE
LFDHTAGHTYLARSGLLGGDFPNHNDVYTQLNPGTTSLTGDQNALKLSFESPVKGGVKVV
EEECCCCCHHHHHCCCCCCCCCCCCCEEEEECCCCCEECCCCCEEEEEECCCCCCCEEEE
KTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAK
EEEEEECCCEEEEECCEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHCHH
HFQKINFSDLDKNKADYVTSADNGWVAMVQHYFASAWIPQQGVKRDIYAEKIDPTLYRVG
HHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHEECC
VKQPVAAIAPGQSADVQARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKI
CCCCHHHCCCCCCCCCEEEEECCCCHHHHHHHHCHHHHHHHHCCHHEEHHHHHHHHHHHH
HSYIGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNSA
HHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWVLWIHDLSQRDPFFIL
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHH
PVLMAVSMYVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQ
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYITRKLGGAKKKPA
HHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA