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The map label for this gene is ybeQ [H]

Identifier: 78067935

GI number: 78067935

Start: 3633894

End: 3634670

Strand: Reverse

Name: ybeQ [H]

Synonym: Bcep18194_A6466

Alternate gene names: 78067935

Gene position: 3634670-3633894 (Counterclockwise)

Preceding gene: 78067936

Following gene: 78067929

Centisome position: 98.39

GC content: 71.43

Gene sequence:

>777_bases
ATGAACGGTGGCGATGGCGCGTGCCGTGGGCGCGCGCGGGGTGTGACCGGGCGGCGCGGGCAGGTCGGCGCGATGCTCGG
CCTGTGGGTCGTGTGGATCGCGGCCGCCGCGCAGGGTGCGCCGCAAGCGAAGCCCGATCCGTCGCACGAGACGCAATCGG
CGGTCGCCGACTACAACGCCGGCGATTATCGTGCGGCGCTGGTGCAGTTCCACGACGCGGCCGAACGCGGCGACCGTCTC
GCGCAATTCAACTACGCGATGATGCTGCTGACGGGCGAAGGCGTGACCGCGAACGTCGACGAAGGGTTGCGCTGGCTGAA
GCGCGCGGCCGACGCGAACATGTCGCATGCGCAGTACGTGTACGGCCGGATGTTCGACGACGGCGAGTTCGTCGCGCGCG
ATCCGGCCGAAGCGCACCGCTGGTTCCTGCGGGCGGCGAAGCAGGGGCATGTGCAGGCCGAGCTGTCGCTCGCGAACCAG
TTCCTCGACGGGCGCGGCACGCCGCGCGACAACCGGCAGGCGTTCACGTGGTACAAGCAGGCGGCCGACGCCGGCGAGCC
GACCGCGCAGTACGTGACCGCGTCGTTCTACGAGCGCGGCGGCGACGGGGTCGCGCAGAACCTGAACATCGCGCGGGCGT
ATTACGCGGCCGCCGCCGCGCAGGGCGACGAGACGGCCGGGATGAAATTCAAGGAACTGAGTGCGCGGCTGAAGGCACAG
GGGCCGGCATCGGGTGCCGGCACGGAGCCGGGTGGGGTGCACGCGCCACCGCCGTGA

Upstream 100 bases:

>100_bases
CGCGCCAGTATCGCGAGGCCGGCTACCGGATGATCACGCTGTCGGCCGACGTCAGCTGGCTGTTGCGTGCCACGCGGCAG
GCGCTGCAGGAGGTACGGTC

Downstream 100 bases:

>100_bases
GCGGGGGGCGGTGCGGCGAAGTGCGGCCGCGATCGCGTTGCGCGGTCGAAAAAAACGGCGCCGAGGCGCCGTTTTTCTTT
GTGCGGTGCGTGCCGCGCGG

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MNGGDGACRGRARGVTGRRGQVGAMLGLWVVWIAAAAQGAPQAKPDPSHETQSAVADYNAGDYRAALVQFHDAAERGDRL
AQFNYAMMLLTGEGVTANVDEGLRWLKRAADANMSHAQYVYGRMFDDGEFVARDPAEAHRWFLRAAKQGHVQAELSLANQ
FLDGRGTPRDNRQAFTWYKQAADAGEPTAQYVTASFYERGGDGVAQNLNIARAYYAAAAAQGDETAGMKFKELSARLKAQ
GPASGAGTEPGGVHAPPP

Sequences:

>Translated_258_residues
MNGGDGACRGRARGVTGRRGQVGAMLGLWVVWIAAAAQGAPQAKPDPSHETQSAVADYNAGDYRAALVQFHDAAERGDRL
AQFNYAMMLLTGEGVTANVDEGLRWLKRAADANMSHAQYVYGRMFDDGEFVARDPAEAHRWFLRAAKQGHVQAELSLANQ
FLDGRGTPRDNRQAFTWYKQAADAGEPTAQYVTASFYERGGDGVAQNLNIARAYYAAAAAQGDETAGMKFKELSARLKAQ
GPASGAGTEPGGVHAPPP
>Mature_258_residues
MNGGDGACRGRARGVTGRRGQVGAMLGLWVVWIAAAAQGAPQAKPDPSHETQSAVADYNAGDYRAALVQFHDAAERGDRL
AQFNYAMMLLTGEGVTANVDEGLRWLKRAADANMSHAQYVYGRMFDDGEFVARDPAEAHRWFLRAAKQGHVQAELSLANQ
FLDGRGTPRDNRQAFTWYKQAADAGEPTAQYVTASFYERGGDGVAQNLNIARAYYAAAAAQGDETAGMKFKELSARLKAQ
GPASGAGTEPGGVHAPPP

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Escherichia coli, GI87081769, Length=167, Percent_Identity=33.5329341317365, Blast_Score=81, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 27562; Mature: 27562

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGGDGACRGRARGVTGRRGQVGAMLGLWVVWIAAAAQGAPQAKPDPSHETQSAVADYNA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCC
GDYRAALVQFHDAAERGDRLAQFNYAMMLLTGEGVTANVDEGLRWLKRAADANMSHAQYV
CHHHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCCEECHHHHHHHHHHHHCCCCCHHHHH
YGRMFDDGEFVARDPAEAHRWFLRAAKQGHVQAELSLANQFLDGRGTPRDNRQAFTWYKQ
HHEECCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
AADAGEPTAQYVTASFYERGGDGVAQNLNIARAYYAAAAAQGDETAGMKFKELSARLKAQ
HHCCCCCHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHCC
GPASGAGTEPGGVHAPPP
CCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNGGDGACRGRARGVTGRRGQVGAMLGLWVVWIAAAAQGAPQAKPDPSHETQSAVADYNA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCC
GDYRAALVQFHDAAERGDRLAQFNYAMMLLTGEGVTANVDEGLRWLKRAADANMSHAQYV
CHHHHHHHHHHHHHHHCCHHHHCCEEEEEEECCCCEECHHHHHHHHHHHHCCCCCHHHHH
YGRMFDDGEFVARDPAEAHRWFLRAAKQGHVQAELSLANQFLDGRGTPRDNRQAFTWYKQ
HHEECCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
AADAGEPTAQYVTASFYERGGDGVAQNLNIARAYYAAAAAQGDETAGMKFKELSARLKAQ
HHCCCCCHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHCC
GPASGAGTEPGGVHAPPP
CCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]