| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067917
Identifier: 78067917
GI number: 78067917
Start: 3613546
End: 3614337
Strand: Direct
Name: 78067917
Synonym: Bcep18194_A6448
Alternate gene names: NA
Gene position: 3613546-3614337 (Clockwise)
Preceding gene: 78067916
Following gene: 78067918
Centisome position: 97.82
GC content: 68.69
Gene sequence:
>792_bases TTGAGCACCCGCAGCAAGACCGCCACACCCGACTTGCCGGCCCCGCTGCGGCGCCGGCGCGTGTCGCGCAGCCGGCCCCG CGCCGGCGCGCCGGTGTGGCTGTTCGATCTCGACAACACCCTTCACCACGCATCGCACGCGATCTTTCCCGAGATCAACC GCGCGATGACGCAGTACATCATCGACGCGCTGCAGGTCGAGCGCGCCGAAGCCGACCGCCTGCGCAACGGCTATACCGAG CGCTACGGCGCCGCGCTCCTCGGCCTCACGCGCCATCATCCGATCGACCCGCACGACTTCCTGCGCGCGGTCCACACATT TTCCGACCTGCCCGCGATGCTGCGCGCCGAACGCGGGCTGGCGCGCATCGTCGCCACGCTCCCCGGGCGCAAGTTCGTGC TGACCAACGCGCCGGAGAACTACGCGCGCGCGGTGCTGCGCGAGTTGCGCATCGAACGGCTGTTCGAGCGCGTGATCGCG ATCGAGCACATGCGCGACCGCCGCACGTGGCGCGCGAAGCCCGATCACACGATGCTGCGCCGGACGCTGCGCGCCGCGAA CGCACGCATGGCCGACGCGATCCTCGTCGAGGATACGCGCGGCCACCTGAAGCGCTACAAGCGCCTCGGCATCGGTACGG TCTGGATCACCGGCCACCTGCCCGGCCATTTGCCGACCACCGGTCGCCCGCACTATGTCGATCATCGCATTCGTTCGCTA AAATCGCTCCGACTGGGCACACGATCGGGGCGACAAAAATGCAGCCGACTTACCCGCAGGACCAAGCCGTAA
Upstream 100 bases:
>100_bases GCGGCGTGAAGTCGGTGCACATCGTCGACGGCCGGATCGAGCACTCGGTGCTGCTGGAAATCCTGACCGAGCAGCCGTTC GGCACGATGATCCGCTCGCA
Downstream 100 bases:
>100_bases CGGAAAGCCAGGCCACACCGACTCGCGCGCGCCCGAAGCCGGGCGAGCGCCGCGTGATGATCCTGCAGACGCTCGCGGCG ATGCTCGAGGCGCCGAAACC
Product: HAD family hydrolase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Superfamily Hydrolase; HAD Family Hydrolase; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Haloacid Dehalogenase Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSTRSKTATPDLPAPLRRRRVSRSRPRAGAPVWLFDLDNTLHHASHAIFPEINRAMTQYIIDALQVERAEADRLRNGYTE RYGAALLGLTRHHPIDPHDFLRAVHTFSDLPAMLRAERGLARIVATLPGRKFVLTNAPENYARAVLRELRIERLFERVIA IEHMRDRRTWRAKPDHTMLRRTLRAANARMADAILVEDTRGHLKRYKRLGIGTVWITGHLPGHLPTTGRPHYVDHRIRSL KSLRLGTRSGRQKCSRLTRRTKP
Sequences:
>Translated_263_residues MSTRSKTATPDLPAPLRRRRVSRSRPRAGAPVWLFDLDNTLHHASHAIFPEINRAMTQYIIDALQVERAEADRLRNGYTE RYGAALLGLTRHHPIDPHDFLRAVHTFSDLPAMLRAERGLARIVATLPGRKFVLTNAPENYARAVLRELRIERLFERVIA IEHMRDRRTWRAKPDHTMLRRTLRAANARMADAILVEDTRGHLKRYKRLGIGTVWITGHLPGHLPTTGRPHYVDHRIRSL KSLRLGTRSGRQKCSRLTRRTKP >Mature_262_residues STRSKTATPDLPAPLRRRRVSRSRPRAGAPVWLFDLDNTLHHASHAIFPEINRAMTQYIIDALQVERAEADRLRNGYTER YGAALLGLTRHHPIDPHDFLRAVHTFSDLPAMLRAERGLARIVATLPGRKFVLTNAPENYARAVLRELRIERLFERVIAI EHMRDRRTWRAKPDHTMLRRTLRAANARMADAILVEDTRGHLKRYKRLGIGTVWITGHLPGHLPTTGRPHYVDHRIRSLK SLRLGTRSGRQKCSRLTRRTKP
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30355; Mature: 30223
Theoretical pI: Translated: 12.10; Mature: 12.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRSKTATPDLPAPLRRRRVSRSRPRAGAPVWLFDLDNTLHHASHAIFPEINRAMTQYI CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH IDALQVERAEADRLRNGYTERYGAALLGLTRHHPIDPHDFLRAVHTFSDLPAMLRAERGL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ARIVATLPGRKFVLTNAPENYARAVLRELRIERLFERVIAIEHMRDRRTWRAKPDHTMLR HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RTLRAANARMADAILVEDTRGHLKRYKRLGIGTVWITGHLPGHLPTTGRPHYVDHRIRSL HHHHHHHHHHHHHHEEECHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH KSLRLGTRSGRQKCSRLTRRTKP HHHHHCHHHHHHHHHHHHHCCCC >Mature Secondary Structure STRSKTATPDLPAPLRRRRVSRSRPRAGAPVWLFDLDNTLHHASHAIFPEINRAMTQYI CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH IDALQVERAEADRLRNGYTERYGAALLGLTRHHPIDPHDFLRAVHTFSDLPAMLRAERGL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ARIVATLPGRKFVLTNAPENYARAVLRELRIERLFERVIAIEHMRDRRTWRAKPDHTMLR HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RTLRAANARMADAILVEDTRGHLKRYKRLGIGTVWITGHLPGHLPTTGRPHYVDHRIRSL HHHHHHHHHHHHHHEEECHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHH KSLRLGTRSGRQKCSRLTRRTKP HHHHHCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA