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The map label for this gene is dppC [H]

Identifier: 78067859

GI number: 78067859

Start: 3557733

End: 3558650

Strand: Reverse

Name: dppC [H]

Synonym: Bcep18194_A6390

Alternate gene names: 78067859

Gene position: 3558650-3557733 (Counterclockwise)

Preceding gene: 78067860

Following gene: 78067858

Centisome position: 96.33

GC content: 68.74

Gene sequence:

>918_bases
ATGAGCAATCTGCAAAATACCCTGCCGACCGAATCCGCGCCGGCCGGCGGCCGTGCGCTCGCGCTGCGCGAGTTCTGGGC
CAACTTCTCGCGCAACCGCGGCGCCGTCGGCGCCGGCATCGTCGTGCTCGTGCTGATCCTGATCGCGCTGCTCGCGCCGC
TGCTCGCGCCGCACAGCCCGGCCGAGCAATACCGCGATTTCGTGAAAATCCCGCCCGCGTGGCTCGACGGCGGCAACTGG
AAATTCATCCTCGGCACCGACGAAGCGGGCCGCGACATCCTTTCGCGCCTGATGTACGGCGCGCGGATGTCGTTCTGGAT
CGGCTTCGTGTCGGTCGTGCTCGCGCTGATCCCCGGCATCGTGCTCGGGCTCGTCGCCGCGTTCTTCCAGAAGTGGGCCG
ACACGCCGGTGATGCGCATCATGGACGTGCTGCTCGCGCTGCCGTCGCTGCTGCTCGCGGTCGCGGTCGTCGCGATCATC
GGCCCGGGCCTCACCAACACGATGTTCGCGATCGCGATCGTCGCGCTGCCGGCCTATGTGCGTCTCACGCGCGCATCGGC
GCTCGGCGAGCTGCAGAAGGAATACGTGACGGCGTCGCGCGTGGCCGGTGCCGGCACGCTGCGCCTGATGTTCTCGCAGG
TGCTGCCGAACTGCACGGCGCCGCTGATCGTGCAGGCGACGCTCGGCTTCTCGTCGGCGATCCTCGACGCGGCCGCGCTC
GGCTTCCTCGGCCTCGGCGTGCAACCGCCGACCGCCGAGTGGGGCGCGATGCTGGCGTCCGCGCGCGACTACATCGACAA
CGCGTGGTGGATCGTGACGATGCCGGGCCTGTCGATCCTGATTTCGGTGCTCGCGATCAACCTGCTCGGCGACGGGCTGC
GTGACGCGCTCGACCCCAAACTGAAACGGATGGCCTAA

Upstream 100 bases:

>100_bases
GGCATCCTGTTGATCGCGACGCTCGTGATCGTCGTGAACCTGGTCGTCGACCTGCTGTACGGCGTGCTGAATCCGCGCAT
CCGCCACACGAGGTAATCCC

Downstream 100 bases:

>100_bases
TCATGAGCCAAGATCTTCTGACCATCCGCAATCTCGCGGTGAATTTCAACGGCCTGCCTGCCGTCGACCGGATCAACCTG
TCGATCGCTCCGGGCGAGGT

Product: oligopeptide/dipeptide ABC transporter, inner membrane subunit

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSNLQNTLPTESAPAGGRALALREFWANFSRNRGAVGAGIVVLVLILIALLAPLLAPHSPAEQYRDFVKIPPAWLDGGNW
KFILGTDEAGRDILSRLMYGARMSFWIGFVSVVLALIPGIVLGLVAAFFQKWADTPVMRIMDVLLALPSLLLAVAVVAII
GPGLTNTMFAIAIVALPAYVRLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
GFLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPKLKRMA

Sequences:

>Translated_305_residues
MSNLQNTLPTESAPAGGRALALREFWANFSRNRGAVGAGIVVLVLILIALLAPLLAPHSPAEQYRDFVKIPPAWLDGGNW
KFILGTDEAGRDILSRLMYGARMSFWIGFVSVVLALIPGIVLGLVAAFFQKWADTPVMRIMDVLLALPSLLLAVAVVAII
GPGLTNTMFAIAIVALPAYVRLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
GFLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPKLKRMA
>Mature_304_residues
SNLQNTLPTESAPAGGRALALREFWANFSRNRGAVGAGIVVLVLILIALLAPLLAPHSPAEQYRDFVKIPPAWLDGGNWK
FILGTDEAGRDILSRLMYGARMSFWIGFVSVVLALIPGIVLGLVAAFFQKWADTPVMRIMDVLLALPSLLLAVAVVAIIG
PGLTNTMFAIAIVALPAYVRLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAALG
FLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPKLKRMA

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=282, Percent_Identity=59.2198581560284, Blast_Score=304, Evalue=4e-84,
Organism=Escherichia coli, GI1787054, Length=280, Percent_Identity=41.7857142857143, Blast_Score=220, Evalue=1e-58,
Organism=Escherichia coli, GI1787760, Length=265, Percent_Identity=43.7735849056604, Blast_Score=213, Evalue=1e-56,
Organism=Escherichia coli, GI1787549, Length=293, Percent_Identity=43.3447098976109, Blast_Score=206, Evalue=1e-54,
Organism=Escherichia coli, GI1789889, Length=226, Percent_Identity=40.7079646017699, Blast_Score=150, Evalue=9e-38,
Organism=Escherichia coli, GI1787498, Length=282, Percent_Identity=29.7872340425532, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=26.1061946902655, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32444; Mature: 32313

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLQNTLPTESAPAGGRALALREFWANFSRNRGAVGAGIVVLVLILIALLAPLLAPHSP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
AEQYRDFVKIPPAWLDGGNWKFILGTDEAGRDILSRLMYGARMSFWIGFVSVVLALIPGI
HHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGLVAAFFQKWADTPVMRIMDVLLALPSLLLAVAVVAIIGPGLTNTMFAIAIVALPAYV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHH
GFLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPK
HHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHH
LKRMA
HHHCC
>Mature Secondary Structure 
SNLQNTLPTESAPAGGRALALREFWANFSRNRGAVGAGIVVLVLILIALLAPLLAPHSP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
AEQYRDFVKIPPAWLDGGNWKFILGTDEAGRDILSRLMYGARMSFWIGFVSVVLALIPGI
HHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGLVAAFFQKWADTPVMRIMDVLLALPSLLLAVAVVAIIGPGLTNTMFAIAIVALPAYV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RLTRASALGELQKEYVTASRVAGAGTLRLMFSQVLPNCTAPLIVQATLGFSSAILDAAAL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHH
GFLGLGVQPPTAEWGAMLASARDYIDNAWWIVTMPGLSILISVLAINLLGDGLRDALDPK
HHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHH
LKRMA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]