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The map label for this gene is ybjT [C]

Identifier: 78067849

GI number: 78067849

Start: 3546851

End: 3547810

Strand: Reverse

Name: ybjT [C]

Synonym: Bcep18194_A6380

Alternate gene names: 78067849

Gene position: 3547810-3546851 (Counterclockwise)

Preceding gene: 78067850

Following gene: 78067848

Centisome position: 96.04

GC content: 71.56

Gene sequence:

>960_bases
ATGGATCGCCAGACCGTCGCGCTGCTGGGCGGCACCGGCTTCATCGGCAGCCGGCTCGTCAATGCGCTGATCGAATCCGG
CAAGCAGGTACGGATCGGCACGCGCCGGCGCGACCACGCGCGTCACCTGCAGATGCTGCCGGTCGAAGTCGTCGAGCTCG
AAGCGCTCGACACGCGCACGCTCGCGCGCTTCGTCGCCGGTGCGCACGCGGCGATCAACCTGGTCGGCGTGCTGCACGGC
GGCCGCGGCACGCCGTACGGGCCCGGCTTCGAACGCGCGCACGTCACGCTGCCGGCCGCGCTCGCGACCGCCTGCACCGA
GGTGGGCGTGCGGCGCGTGCTGCACATGAGCGCGCTCGGCGCCGATTCGCACGGCGCGAGCATGTACCAGCGCTCGAAGG
GCGACGGCGAGGCCGCGCTGCATGCGATCGCGGCGACCGATTCGCTCGCGCTGACGATCTTCCGCCCGTCGGTCGTGTTC
GGCCCCGGCGACGCGTTCCTCAACACGTTCGCGAATCTGCAGCGCTCGGTGCCGGTGCTGCCGCTCGCGATGCCCGACGC
GCGCTTCCAGCCGGTGTTCGTCGGCGATGTCGTGCGCGCGTTCGTCAACACGCTCGATCTCGCGGCCTCACACGGCAAGA
CCTACGAACTCGGCGGCCCGACCGTCTACACGCTCGAGCAGCTGGTGCGCTATTGCGGCACGCTGGTCGGCCGGCAGGCA
CGCATCGTGCGGCTGCCCGACGCGCTCGCGCGGCTGCAGGCAAGCGTGTTCGAATGCCTGCCCGGCGAGCCCGTGCTCAC
GCGCGACAATCTCGCGACGATGTCGGTGCCGAACGTGCTGTCGGGGCCGCTCGCGCCGGAGCTCGGGATCTCGCCCGCGA
GCCTCGAAAGCATCGCGCCCGCGTATCTCGGCAATACCGCGCAGCGGTCCCGGTTCGACTGGTTCCGCTCGCGCCGCTAG

Upstream 100 bases:

>100_bases
GGCTCGGCCAAACGGCGCTCCTTACTTCTTGCACTGCAGCCGGCAAGGCTCGTTCGCAAGCCCGTTATTAGCGTGAACAG
CCCCTTAGAGGTCTCGAATC

Downstream 100 bases:

>100_bases
GCCGGCAGCGTCCTCCTTTTCACCTTCGCGTTTTCCGGAATACCGCCATGAAACTCGTCATTGGAGACAAGAACTACTCG
TCGTGGTCGATGCGCCCGTG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase; NmrA Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NADH-Ubiquinone Oxidoreductase Subunit; Oxidoreductase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dtdp-Glucose-46-Dehydratase; NADH-Ubiquinone Oxireductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NADH-Ubiquinone Oxidoreductase Family Protein; Nucleoside-Diphosphate Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; Male Sterility-Like Protein; NDP-Sugar Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerases; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; Acyl-CoA Synthetase; Homolog NADH Dehydrogenase; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; LOW QUALITY PROTEIN Oxidoreductase

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MDRQTVALLGGTGFIGSRLVNALIESGKQVRIGTRRRDHARHLQMLPVEVVELEALDTRTLARFVAGAHAAINLVGVLHG
GRGTPYGPGFERAHVTLPAALATACTEVGVRRVLHMSALGADSHGASMYQRSKGDGEAALHAIAATDSLALTIFRPSVVF
GPGDAFLNTFANLQRSVPVLPLAMPDARFQPVFVGDVVRAFVNTLDLAASHGKTYELGGPTVYTLEQLVRYCGTLVGRQA
RIVRLPDALARLQASVFECLPGEPVLTRDNLATMSVPNVLSGPLAPELGISPASLESIAPAYLGNTAQRSRFDWFRSRR

Sequences:

>Translated_319_residues
MDRQTVALLGGTGFIGSRLVNALIESGKQVRIGTRRRDHARHLQMLPVEVVELEALDTRTLARFVAGAHAAINLVGVLHG
GRGTPYGPGFERAHVTLPAALATACTEVGVRRVLHMSALGADSHGASMYQRSKGDGEAALHAIAATDSLALTIFRPSVVF
GPGDAFLNTFANLQRSVPVLPLAMPDARFQPVFVGDVVRAFVNTLDLAASHGKTYELGGPTVYTLEQLVRYCGTLVGRQA
RIVRLPDALARLQASVFECLPGEPVLTRDNLATMSVPNVLSGPLAPELGISPASLESIAPAYLGNTAQRSRFDWFRSRR
>Mature_319_residues
MDRQTVALLGGTGFIGSRLVNALIESGKQVRIGTRRRDHARHLQMLPVEVVELEALDTRTLARFVAGAHAAINLVGVLHG
GRGTPYGPGFERAHVTLPAALATACTEVGVRRVLHMSALGADSHGASMYQRSKGDGEAALHAIAATDSLALTIFRPSVVF
GPGDAFLNTFANLQRSVPVLPLAMPDARFQPVFVGDVVRAFVNTLDLAASHGKTYELGGPTVYTLEQLVRYCGTLVGRQA
RIVRLPDALARLQASVFECLPGEPVLTRDNLATMSVPNVLSGPLAPELGISPASLESIAPAYLGNTAQRSRFDWFRSRR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=302, Percent_Identity=33.112582781457, Blast_Score=125, Evalue=4e-29,
Organism=Escherichia coli, GI87081793, Length=244, Percent_Identity=23.7704918032787, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17556106, Length=284, Percent_Identity=27.112676056338, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24667554, Length=327, Percent_Identity=27.5229357798165, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34106; Mature: 34106

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRQTVALLGGTGFIGSRLVNALIESGKQVRIGTRRRDHARHLQMLPVEVVELEALDTRT
CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHH
LARFVAGAHAAINLVGVLHGGRGTPYGPGFERAHVTLPAALATACTEVGVRRVLHMSALG
HHHHHHHHHHHHEEEHEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC
ADSHGASMYQRSKGDGEAALHAIAATDSLALTIFRPSVVFGPGDAFLNTFANLQRSVPVL
CCCCCHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCEEEECCCHHHHHHHHHHHHCCCEE
PLAMPDARFQPVFVGDVVRAFVNTLDLAASHGKTYELGGPTVYTLEQLVRYCGTLVGRQA
EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCCC
RIVRLPDALARLQASVFECLPGEPVLTRDNLATMSVPNVLSGPLAPELGISPASLESIAP
EEEECHHHHHHHHHHHHHHCCCCCEEECCCCCEECCCHHHCCCCCCCCCCCHHHHHHHHH
AYLGNTAQRSRFDWFRSRR
HHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MDRQTVALLGGTGFIGSRLVNALIESGKQVRIGTRRRDHARHLQMLPVEVVELEALDTRT
CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHH
LARFVAGAHAAINLVGVLHGGRGTPYGPGFERAHVTLPAALATACTEVGVRRVLHMSALG
HHHHHHHHHHHHEEEHEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCC
ADSHGASMYQRSKGDGEAALHAIAATDSLALTIFRPSVVFGPGDAFLNTFANLQRSVPVL
CCCCCHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCEEEECCCHHHHHHHHHHHHCCCEE
PLAMPDARFQPVFVGDVVRAFVNTLDLAASHGKTYELGGPTVYTLEQLVRYCGTLVGRQA
EEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCCCC
RIVRLPDALARLQASVFECLPGEPVLTRDNLATMSVPNVLSGPLAPELGISPASLESIAP
EEEECHHHHHHHHHHHHHHCCCCCEEECCCCCEECCCHHHCCCCCCCCCCCHHHHHHHHH
AYLGNTAQRSRFDWFRSRR
HHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA