| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067754
Identifier: 78067754
GI number: 78067754
Start: 3446916
End: 3448271
Strand: Direct
Name: 78067754
Synonym: Bcep18194_A6285
Alternate gene names: NA
Gene position: 3446916-3448271 (Clockwise)
Preceding gene: 78067753
Following gene: 78067760
Centisome position: 93.31
GC content: 66.89
Gene sequence:
>1356_bases ATGGCCAACCTGGCTCAGGGCCGCCCCGACGAGGATCTCGACCTGTCGACGCTCGCCGTTCCCGACCACGCGCGCATGCC GCCCTTTTCGCTGACGATGGCGTGGTGGGCCGTGTGCAGCGCGGTGTTCTACATCGTCGTGGGCGCCACGCTCGCGCTCA CCTACGGCGCGCGCAACGCGCTGATCGGGATGGCGCTGTCGGTCGTGTCGTACGGCCTCGTCAACACGATCATCAGCCGC TATGCGATCCGCACGGGACTCTCGGTCGCGCTGTTCTCGCGCGTGCTGTTCGGCAGCGCCGGCGCGGCGCTCGCGACGCT GATCTTCTTCGCGACGGCGATCTACTACGCGGTGTTCGAAGGCTCGGTGATCGCGGTGGCCGCGCATCACCAGTTTCCCG GGCTCGACTACAAATGGGCCGCGCTGATCGTCGTCTGCTACAGCGTGCCGCTCGTGTTCGGCAGCGTGCAGCACTGGCTC GACAAGTTCAACGGCGTGCTGCTGCCGTTCTACCTGCTCGGGCTGCTCGCGGCGGTCGGGCTCGCGACGGCCGAATACGG GTATAACGCAGCGTGGCTCGATTTCGGGCCGACGGGAGCCGCACCGGCCGGCGGCTGGTGGCACTGCTTCGTCTACTACA TGGGCGTGTGGGTGCTGATGATGTTCACGTTCGACTACGCGCGCTTCGGCCGCAAGGAGGACGCGGGTTATCACGGCCGC TTCAACTTCGGGATGCCGTTCTACCTCGTCACGTTTCTCGTCAACGGCGCCGCCGGCATCTATCTCGTCAGCACGATTCC AGGGCTCGGTACGCTCTCCGAAGTATCGGTCGTGCTCGCGCTGCTGAAGCTGATGAGCGTGTGGGGGCTGCTGTTCGTGT GGGTCACGCAATCCCGCATCAACACCGCGAACTACTACCTCGCGACCGTCAACATGCAGGCGTTCTTCCTGAAGCTGGCC GGCCTGCGCGCGCCGAAGTTCGTGTGGGCGCTCGTGGTCGGCGCGGTCGTCTATGCGCTGATGATGGCGGACATCTTCTC GCGGATCCTGCAGGCGCTCGCGTACCAGGGCATCTTCGTCGTCGCCTGGGTCGGCGTCGCGCTCGCGCACATCCTGTCCG ACCGGTACGGGCAACTCGTCGGCGACGACGTCGAATGCCGCGACGCGCATGTGCCGACCTTCAACCCGGGCGGGCTGGCC GCCTGGTTCGCCGGCGCGTTCACGGGACTCGCGCTGAACCAGGCGACGGGGTTCGCCGCGTCGCTGTCGGCGCCCGCGAC GTTCGTCGTGTCGTGGGTGGTCTATCGCGCGCTGCTGGGCACGGCCAAGCGGACCTGGTTCGTGCGCAATACGTGA
Upstream 100 bases:
>100_bases GTCGAACCGGTTGCCCGCCCGACGTCGGGGCAACCCTGCGGATCGCATGTGCCGCGGCCGAGACGTCGTTCGCAGTTTCC GCTCATCAAGGAGCACGATC
Downstream 100 bases:
>100_bases CGGGACGCCCGCGCGCCGCCGCGCCTCATCCGATCGTCTGCACCGCGTTGCCCTGCGCATCGCGGATCACGGTCTTCTCC ACGCGCCAGCGCACGCCGTC
Product: permease for cytosine/purines, uracil, thiamine, allantoin tranporter
Products: NA
Alternate protein names: Permease; Permease For Cytosine/Purines
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MANLAQGRPDEDLDLSTLAVPDHARMPPFSLTMAWWAVCSAVFYIVVGATLALTYGARNALIGMALSVVSYGLVNTIISR YAIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFEGSVIAVAAHHQFPGLDYKWAALIVVCYSVPLVFGSVQHWL DKFNGVLLPFYLLGLLAAVGLATAEYGYNAAWLDFGPTGAAPAGGWWHCFVYYMGVWVLMMFTFDYARFGRKEDAGYHGR FNFGMPFYLVTFLVNGAAGIYLVSTIPGLGTLSEVSVVLALLKLMSVWGLLFVWVTQSRINTANYYLATVNMQAFFLKLA GLRAPKFVWALVVGAVVYALMMADIFSRILQALAYQGIFVVAWVGVALAHILSDRYGQLVGDDVECRDAHVPTFNPGGLA AWFAGAFTGLALNQATGFAASLSAPATFVVSWVVYRALLGTAKRTWFVRNT
Sequences:
>Translated_451_residues MANLAQGRPDEDLDLSTLAVPDHARMPPFSLTMAWWAVCSAVFYIVVGATLALTYGARNALIGMALSVVSYGLVNTIISR YAIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFEGSVIAVAAHHQFPGLDYKWAALIVVCYSVPLVFGSVQHWL DKFNGVLLPFYLLGLLAAVGLATAEYGYNAAWLDFGPTGAAPAGGWWHCFVYYMGVWVLMMFTFDYARFGRKEDAGYHGR FNFGMPFYLVTFLVNGAAGIYLVSTIPGLGTLSEVSVVLALLKLMSVWGLLFVWVTQSRINTANYYLATVNMQAFFLKLA GLRAPKFVWALVVGAVVYALMMADIFSRILQALAYQGIFVVAWVGVALAHILSDRYGQLVGDDVECRDAHVPTFNPGGLA AWFAGAFTGLALNQATGFAASLSAPATFVVSWVVYRALLGTAKRTWFVRNT >Mature_450_residues ANLAQGRPDEDLDLSTLAVPDHARMPPFSLTMAWWAVCSAVFYIVVGATLALTYGARNALIGMALSVVSYGLVNTIISRY AIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFEGSVIAVAAHHQFPGLDYKWAALIVVCYSVPLVFGSVQHWLD KFNGVLLPFYLLGLLAAVGLATAEYGYNAAWLDFGPTGAAPAGGWWHCFVYYMGVWVLMMFTFDYARFGRKEDAGYHGRF NFGMPFYLVTFLVNGAAGIYLVSTIPGLGTLSEVSVVLALLKLMSVWGLLFVWVTQSRINTANYYLATVNMQAFFLKLAG LRAPKFVWALVVGAVVYALMMADIFSRILQALAYQGIFVVAWVGVALAHILSDRYGQLVGDDVECRDAHVPTFNPGGLAA WFAGAFTGLALNQATGFAASLSAPATFVVSWVVYRALLGTAKRTWFVRNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48938; Mature: 48806
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLAQGRPDEDLDLSTLAVPDHARMPPFSLTMAWWAVCSAVFYIVVGATLALTYGARNA CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LIGMALSVVSYGLVNTIISRYAIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFE HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC GSVIAVAAHHQFPGLDYKWAALIVVCYSVPLVFGSVQHWLDKFNGVLLPFYLLGLLAAVG CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LATAEYGYNAAWLDFGPTGAAPAGGWWHCFVYYMGVWVLMMFTFDYARFGRKEDAGYHGR HHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE FNFGMPFYLVTFLVNGAAGIYLVSTIPGLGTLSEVSVVLALLKLMSVWGLLFVWVTQSRI ECCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NTANYYLATVNMQAFFLKLAGLRAPKFVWALVVGAVVYALMMADIFSRILQALAYQGIFV CCCEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VAWVGVALAHILSDRYGQLVGDDVECRDAHVPTFNPGGLAAWFAGAFTGLALNQATGFAA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH SLSAPATFVVSWVVYRALLGTAKRTWFVRNT HCCCCHHHHHHHHHHHHHHHHHHHCEEEECC >Mature Secondary Structure ANLAQGRPDEDLDLSTLAVPDHARMPPFSLTMAWWAVCSAVFYIVVGATLALTYGARNA CCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LIGMALSVVSYGLVNTIISRYAIRTGLSVALFSRVLFGSAGAALATLIFFATAIYYAVFE HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC GSVIAVAAHHQFPGLDYKWAALIVVCYSVPLVFGSVQHWLDKFNGVLLPFYLLGLLAAVG CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LATAEYGYNAAWLDFGPTGAAPAGGWWHCFVYYMGVWVLMMFTFDYARFGRKEDAGYHGR HHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCE FNFGMPFYLVTFLVNGAAGIYLVSTIPGLGTLSEVSVVLALLKLMSVWGLLFVWVTQSRI ECCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NTANYYLATVNMQAFFLKLAGLRAPKFVWALVVGAVVYALMMADIFSRILQALAYQGIFV CCCEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VAWVGVALAHILSDRYGQLVGDDVECRDAHVPTFNPGGLAAWFAGAFTGLALNQATGFAA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH SLSAPATFVVSWVVYRALLGTAKRTWFVRNT HCCCCHHHHHHHHHHHHHHHHHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA