Click here to switch to the map view.

The map label for this gene is 78067707

Identifier: 78067707

GI number: 78067707

Start: 3395752

End: 3396069

Strand: Reverse

Name: 78067707

Synonym: Bcep18194_A6238

Alternate gene names: NA

Gene position: 3396069-3395752 (Counterclockwise)

Preceding gene: 78067708

Following gene: 78067706

Centisome position: 91.93

GC content: 63.84

Gene sequence:

>318_bases
ATGGATTCCTACTACCAGCACCACGTCTTCTTCTGCCTGAACCAGCGCGAACCGGGCGCCGAGCGCCCGAGCTGCGCGCA
ATGCGACGCGCAGAGCATGCAGGAATACGCGAAAAAGCGCGTGAAGGAACTCGGCCTCGCGGGGCCCGGCAAGGTTCGCA
TCAACAAGGCCGGCTGCCTCGACCGCTGCGAGGAAGGGCCCGTGATGGTCGTGTATCCGGAAGGCACGTGGTACACGTAC
GTCGACCAGGCCGACATCGACGAGATCGTCGAATCGCACCTGCGCGACGGCAAGGTCGTCGACCGCCTGAAGATCTGA

Upstream 100 bases:

>100_bases
TAAGCGCCGCTTGGCACCGAACACTACACGCCCGCTGCCCCGCGCAGCGGCAACCACCCCTCTTTCCGCACGGCCTCGCG
CCGGGCCGCTCGTCACCATC

Downstream 100 bases:

>100_bases
GCGGGCCGGCCGAATGAACGTTCATACGCAGAAGTCGCTGATCGCGGGCCCGGTCGGGCAGATCGAAATCGCGGTCGACC
TTCCCGACGCCGTGCGCGAA

Product: ferredoxin-like

Products: NA

Alternate protein names: 2FeCpFd [H]

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MDSYYQHHVFFCLNQREPGAERPSCAQCDAQSMQEYAKKRVKELGLAGPGKVRINKAGCLDRCEEGPVMVVYPEGTWYTY
VDQADIDEIVESHLRDGKVVDRLKI

Sequences:

>Translated_105_residues
MDSYYQHHVFFCLNQREPGAERPSCAQCDAQSMQEYAKKRVKELGLAGPGKVRINKAGCLDRCEEGPVMVVYPEGTWYTY
VDQADIDEIVESHLRDGKVVDRLKI
>Mature_105_residues
MDSYYQHHVFFCLNQREPGAERPSCAQCDAQSMQEYAKKRVKELGLAGPGKVRINKAGCLDRCEEGPVMVVYPEGTWYTY
VDQADIDEIVESHLRDGKVVDRLKI

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 11982; Mature: 11982

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSYYQHHVFFCLNQREPGAERPSCAQCDAQSMQEYAKKRVKELGLAGPGKVRINKAGCL
CCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
DRCEEGPVMVVYPEGTWYTYVDQADIDEIVESHLRDGKVVDRLKI
CCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHCCCCCCHHCCCC
>Mature Secondary Structure
MDSYYQHHVFFCLNQREPGAERPSCAQCDAQSMQEYAKKRVKELGLAGPGKVRINKAGCL
CCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
DRCEEGPVMVVYPEGTWYTYVDQADIDEIVESHLRDGKVVDRLKI
CCCCCCCEEEEEECCCEEEEECCCCHHHHHHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3790505; 7916603; 8334159; 8392833 [H]