| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067706
Identifier: 78067706
GI number: 78067706
Start: 3395094
End: 3395738
Strand: Reverse
Name: 78067706
Synonym: Bcep18194_A6237
Alternate gene names: NA
Gene position: 3395738-3395094 (Counterclockwise)
Preceding gene: 78067707
Following gene: 78067705
Centisome position: 91.92
GC content: 68.84
Gene sequence:
>645_bases ATGAACGTTCATACGCAGAAGTCGCTGATCGCGGGCCCGGTCGGGCAGATCGAAATCGCGGTCGACCTTCCCGACGCCGT GCGCGAAAGCGGCGCCGCGCCGCGCGGCATCGCGCTGGTCGCGCATCCGCATCCGCTGTTCGGCGGCACGATGGACAACA AGGTCGCGCAAACCCTCGCGCGCACGCTCGTGCAGTTGAACTACGTCGTGTTCCGGTCGAACTTCCGCGGCGTCGGCGCG ACCGATGGCGTGCACGACAACGGCACCGGCGAGGCCGACGACCTGCTCGCGGTGCTCGCGCACATGCGTGCGCAGCCCGC GTATGCGGACCTGCCGCTCGTGCTCGCGGGCTTCTCGTTCGGCACCTTCGTGCTGTCGCACGTCGCGAAGCGGTTGCGCG ACGCGGGCGAGACGATCGAGCGGATGGTGTTCGTCGGCACGGCCGCGAGCCGCTGGCAGGTGGCCGACGTGCCGGAGAAC ACGCTCGTGATCCACGGCGAAACCGACGACACGGTGCCGATCGCTTCCGTGTACGACTGGGCGCGGCCGCAGGAGCTGCC GGTCGTCGTGATCCCCGGTGCCGAGCATTTCCTGCATCGCAAGCTGCACGTGCTGAAGCGCATCATCGTCGACGCCTGGC GCTAG
Upstream 100 bases:
>100_bases TACACGTACGTCGACCAGGCCGACATCGACGAGATCGTCGAATCGCACCTGCGCGACGGCAAGGTCGTCGACCGCCTGAA GATCTGAGCGGGCCGGCCGA
Downstream 100 bases:
>100_bases CCAGTGCGCGGGGGCCGGCGTAACGCCGGCAGCCCGCGTCGCCTCTCACACAGGATCTCCGGCCCACGCCGGACGCGCGT TCTCCCCGCGCGACATCGCG
Product: alpha/beta fold family hydrolase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNVHTQKSLIAGPVGQIEIAVDLPDAVRESGAAPRGIALVAHPHPLFGGTMDNKVAQTLARTLVQLNYVVFRSNFRGVGA TDGVHDNGTGEADDLLAVLAHMRAQPAYADLPLVLAGFSFGTFVLSHVAKRLRDAGETIERMVFVGTAASRWQVADVPEN TLVIHGETDDTVPIASVYDWARPQELPVVVIPGAEHFLHRKLHVLKRIIVDAWR
Sequences:
>Translated_214_residues MNVHTQKSLIAGPVGQIEIAVDLPDAVRESGAAPRGIALVAHPHPLFGGTMDNKVAQTLARTLVQLNYVVFRSNFRGVGA TDGVHDNGTGEADDLLAVLAHMRAQPAYADLPLVLAGFSFGTFVLSHVAKRLRDAGETIERMVFVGTAASRWQVADVPEN TLVIHGETDDTVPIASVYDWARPQELPVVVIPGAEHFLHRKLHVLKRIIVDAWR >Mature_214_residues MNVHTQKSLIAGPVGQIEIAVDLPDAVRESGAAPRGIALVAHPHPLFGGTMDNKVAQTLARTLVQLNYVVFRSNFRGVGA TDGVHDNGTGEADDLLAVLAHMRAQPAYADLPLVLAGFSFGTFVLSHVAKRLRDAGETIERMVFVGTAASRWQVADVPEN TLVIHGETDDTVPIASVYDWARPQELPVVVIPGAEHFLHRKLHVLKRIIVDAWR
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 23200; Mature: 23200
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVHTQKSLIAGPVGQIEIAVDLPDAVRESGAAPRGIALVAHPHPLFGGTMDNKVAQTLA CCCCCCHHHHCCCCCEEEEEEECCHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH RTLVQLNYVVFRSNFRGVGATDGVHDNGTGEADDLLAVLAHMRAQPAYADLPLVLAGFSF HHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCH GTFVLSHVAKRLRDAGETIERMVFVGTAASRWQVADVPENTLVIHGETDDTVPIASVYDW HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHHHC ARPQELPVVVIPGAEHFLHRKLHVLKRIIVDAWR CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNVHTQKSLIAGPVGQIEIAVDLPDAVRESGAAPRGIALVAHPHPLFGGTMDNKVAQTLA CCCCCCHHHHCCCCCEEEEEEECCHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH RTLVQLNYVVFRSNFRGVGATDGVHDNGTGEADDLLAVLAHMRAQPAYADLPLVLAGFSF HHHHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCH GTFVLSHVAKRLRDAGETIERMVFVGTAASRWQVADVPENTLVIHGETDDTVPIASVYDW HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHHHC ARPQELPVVVIPGAEHFLHRKLHVLKRIIVDAWR CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]