| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
Click here to switch to the map view.
The map label for this gene is 78067677
Identifier: 78067677
GI number: 78067677
Start: 3361746
End: 3363428
Strand: Reverse
Name: 78067677
Synonym: Bcep18194_A6208
Alternate gene names: NA
Gene position: 3363428-3361746 (Counterclockwise)
Preceding gene: 78067678
Following gene: 78067676
Centisome position: 91.05
GC content: 52.64
Gene sequence:
>1683_bases GTGAGCGATGGATCAAGTCTCGATGTCCCACCAGTCACCTTCGTGATCAAAGATCGCCAAGGAAACTCTCGCACGCTACT CGATTTCTCAGAGCTGAATCTTTCTGACCGGATGACTCGGGCGCTTCGAGTTGCGTTCGAAACTGAATGTGGTCATCTTG CGGTCGAAACGCAAAGACAAGTGTGGCGTTGCTGCAAGAAGCTGTCCATGTTTATGCAGGATGAAGGCTTGGACAGGAAG ATGCCACTTCCTTCCGATATGCTCCTGCGTTACCGAATTTGGCTTGAAAAGACCACGCTATGTAATGCCACCAGACAAAG CGTTCTTAATGTCGGCATTTCGATCGTGACTGCCAGCTCAAGAATTGACCCAGGGATAGTGAGTTCGGGCTTTAGGCTTG ATGTGAGATCTTTCGAGCGAGGTGCTCCGAAGCCATCACCGGCTCTATCTGAGCAGTCTATGAAGCAAGTACTGCAAGCG TGCTATGAGGAGATCTCGGCGATCGAGCAACGGCTCATGGCGGGGCGAAGTCTGCTGGACAACGATTGCAAGGATGACAG CGACAAGGCTCGTCGCGAGGTTATGCGTAGGTTTGTAGCGCTCACGAGCAACGGGATACCGAAGAAACGTGACGTTATTG CAATGGGTAAGGCGTTCTCGAGACAGGTCGATGCGCTGGGCGGGGTGCGAGCTATCATAAGTCAGCTACACGTAACAGCA AGAGATATATTGCCCTTTTATCTTGCTATTCTGGCACAGACCAGCGGAAACCCCATGGCCATTCTTGACATTGGCTGCGA CTGCATCCGCGATCACCCTCTACGTGCCGACATTGCGTCAGTCGTTTGGTCAAAACCTCGATCTCAGCGCGAACAAAAAG CCGACTTTCCAATCGCGCATCGATGGTCTGCTCCAAATTTGATAAATCGACTGAAGACGCTCAACGATCCACTCCGTCCG TGGTCGGGAGAAAGATTCTCAGACAGATTATTTGTGGCGTACTGCAATGGACGAGCGGCGGTTCCGTGCATCCAACTTTT TCATATCATGCTCGACGAGTTCATTCGAGAGCACAAGCTCGAGCACTTCGACTTCAAGCAGTTGAGAAAGACGGGTGCCA CCATAATTTTCCGTGAGACGGGCGATGTGCGTGTCGTTAAGGAGAGGCTAAATCATCGGTCTACCGCTACAACCAGGCGA TATATAGACGAGCCACTACTCCGCGAGGTCCATGACCAGCTCATCCATCGCTTTCAGGGCGAACTGATTTCTATGTCGAT GAACAGCAGGCTCCAAGCCAGCGCGACCGATCAGCGTACCAGCATTTCGAAGAACCCTTCGGAAACAGTTTTCGGTTTTC TATGCCGAGATCCACTTGCGGGACTTGCGACGGGATCCGTCCGCGGACAACTCTGCGAGCATTTCCAACAGTGTGCGACG TGTCCAGGCGCAATAGTGCCGCTTGACGACCCGAAGATCGTTGCCCGTCTCTTGGATTCGCTGGATCAACTTCGGAACAG GCGTGCCGAGGCGGAAGTTGAGGGATGGGTAAGGCGTTTTGATCTCTTGTATGGGGCGACGATATCGATTTTGCAGGACG AGCTAATTCAGAAGGTCAGCCCCGTCATCTTGGATGCAGCCTCACACATGCGGAATCACTGGCCTCTTCCTAGGGTGGAC TAG
Upstream 100 bases:
>100_bases GACACACGGCAATCGAAACCACAGAAATTTATCTTCGCGCGTTGGACGCCAACTCGGCAGCGGTTCAGGAAGCGCTGGAC TTTTTGTACGGAGGAACATT
Downstream 100 bases:
>100_bases CGATATGCGGAAACCTGATCTAATCAAGAGAGTTGATCGCTCAACTTGGCTTTTGCAGAACGACAAGCTGCAAGAAGGGC CGGTTATCATTAATTGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 560; Mature: 559
Protein sequence:
>560_residues MSDGSSLDVPPVTFVIKDRQGNSRTLLDFSELNLSDRMTRALRVAFETECGHLAVETQRQVWRCCKKLSMFMQDEGLDRK MPLPSDMLLRYRIWLEKTTLCNATRQSVLNVGISIVTASSRIDPGIVSSGFRLDVRSFERGAPKPSPALSEQSMKQVLQA CYEEISAIEQRLMAGRSLLDNDCKDDSDKARREVMRRFVALTSNGIPKKRDVIAMGKAFSRQVDALGGVRAIISQLHVTA RDILPFYLAILAQTSGNPMAILDIGCDCIRDHPLRADIASVVWSKPRSQREQKADFPIAHRWSAPNLINRLKTLNDPLRP WSGERFSDRLFVAYCNGRAAVPCIQLFHIMLDEFIREHKLEHFDFKQLRKTGATIIFRETGDVRVVKERLNHRSTATTRR YIDEPLLREVHDQLIHRFQGELISMSMNSRLQASATDQRTSISKNPSETVFGFLCRDPLAGLATGSVRGQLCEHFQQCAT CPGAIVPLDDPKIVARLLDSLDQLRNRRAEAEVEGWVRRFDLLYGATISILQDELIQKVSPVILDAASHMRNHWPLPRVD
Sequences:
>Translated_560_residues MSDGSSLDVPPVTFVIKDRQGNSRTLLDFSELNLSDRMTRALRVAFETECGHLAVETQRQVWRCCKKLSMFMQDEGLDRK MPLPSDMLLRYRIWLEKTTLCNATRQSVLNVGISIVTASSRIDPGIVSSGFRLDVRSFERGAPKPSPALSEQSMKQVLQA CYEEISAIEQRLMAGRSLLDNDCKDDSDKARREVMRRFVALTSNGIPKKRDVIAMGKAFSRQVDALGGVRAIISQLHVTA RDILPFYLAILAQTSGNPMAILDIGCDCIRDHPLRADIASVVWSKPRSQREQKADFPIAHRWSAPNLINRLKTLNDPLRP WSGERFSDRLFVAYCNGRAAVPCIQLFHIMLDEFIREHKLEHFDFKQLRKTGATIIFRETGDVRVVKERLNHRSTATTRR YIDEPLLREVHDQLIHRFQGELISMSMNSRLQASATDQRTSISKNPSETVFGFLCRDPLAGLATGSVRGQLCEHFQQCAT CPGAIVPLDDPKIVARLLDSLDQLRNRRAEAEVEGWVRRFDLLYGATISILQDELIQKVSPVILDAASHMRNHWPLPRVD >Mature_559_residues SDGSSLDVPPVTFVIKDRQGNSRTLLDFSELNLSDRMTRALRVAFETECGHLAVETQRQVWRCCKKLSMFMQDEGLDRKM PLPSDMLLRYRIWLEKTTLCNATRQSVLNVGISIVTASSRIDPGIVSSGFRLDVRSFERGAPKPSPALSEQSMKQVLQAC YEEISAIEQRLMAGRSLLDNDCKDDSDKARREVMRRFVALTSNGIPKKRDVIAMGKAFSRQVDALGGVRAIISQLHVTAR DILPFYLAILAQTSGNPMAILDIGCDCIRDHPLRADIASVVWSKPRSQREQKADFPIAHRWSAPNLINRLKTLNDPLRPW SGERFSDRLFVAYCNGRAAVPCIQLFHIMLDEFIREHKLEHFDFKQLRKTGATIIFRETGDVRVVKERLNHRSTATTRRY IDEPLLREVHDQLIHRFQGELISMSMNSRLQASATDQRTSISKNPSETVFGFLCRDPLAGLATGSVRGQLCEHFQQCATC PGAIVPLDDPKIVARLLDSLDQLRNRRAEAEVEGWVRRFDLLYGATISILQDELIQKVSPVILDAASHMRNHWPLPRVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63446; Mature: 63315
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGSSLDVPPVTFVIKDRQGNSRTLLDFSELNLSDRMTRALRVAFETECGHLAVETQRQ CCCCCCCCCCCEEEEEECCCCCCCEEEEHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH VWRCCKKLSMFMQDEGLDRKMPLPSDMLLRYRIWLEKTTLCNATRQSVLNVGISIVTASS HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECC RIDPGIVSSGFRLDVRSFERGAPKPSPALSEQSMKQVLQACYEEISAIEQRLMAGRSLLD CCCCCCCCCCCEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NDCKDDSDKARREVMRRFVALTSNGIPKKRDVIAMGKAFSRQVDALGGVRAIISQLHVTA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDILPFYLAILAQTSGNPMAILDIGCDCIRDHPLRADIASVVWSKPRSQREQKADFPIAH HHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCCCEE RWSAPNLINRLKTLNDPLRPWSGERFSDRLFVAYCNGRAAVPCIQLFHIMLDEFIREHKL CCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC EHFDFKQLRKTGATIIFRETGDVRVVKERLNHRSTATTRRYIDEPLLREVHDQLIHRFQG CCCCHHHHHHCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCC ELISMSMNSRLQASATDQRTSISKNPSETVFGFLCRDPLAGLATGSVRGQLCEHFQQCAT HHEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHC CPGAIVPLDDPKIVARLLDSLDQLRNRRAEAEVEGWVRRFDLLYGATISILQDELIQKVS CCCCEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVILDAASHMRNHWPLPRVD HHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SDGSSLDVPPVTFVIKDRQGNSRTLLDFSELNLSDRMTRALRVAFETECGHLAVETQRQ CCCCCCCCCCEEEEEECCCCCCCEEEEHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHH VWRCCKKLSMFMQDEGLDRKMPLPSDMLLRYRIWLEKTTLCNATRQSVLNVGISIVTASS HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECC RIDPGIVSSGFRLDVRSFERGAPKPSPALSEQSMKQVLQACYEEISAIEQRLMAGRSLLD CCCCCCCCCCCEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NDCKDDSDKARREVMRRFVALTSNGIPKKRDVIAMGKAFSRQVDALGGVRAIISQLHVTA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDILPFYLAILAQTSGNPMAILDIGCDCIRDHPLRADIASVVWSKPRSQREQKADFPIAH HHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCCHHHHHHHHHCCCHHHHHHHCCCCCEE RWSAPNLINRLKTLNDPLRPWSGERFSDRLFVAYCNGRAAVPCIQLFHIMLDEFIREHKL CCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC EHFDFKQLRKTGATIIFRETGDVRVVKERLNHRSTATTRRYIDEPLLREVHDQLIHRFQG CCCCHHHHHHCCCEEEEECCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCC ELISMSMNSRLQASATDQRTSISKNPSETVFGFLCRDPLAGLATGSVRGQLCEHFQQCAT HHEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHC CPGAIVPLDDPKIVARLLDSLDQLRNRRAEAEVEGWVRRFDLLYGATISILQDELIQKVS CCCCEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PVILDAASHMRNHWPLPRVD HHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA