| Definition | Burkholderia sp. 383 chromosome 1, complete genome. |
|---|---|
| Accession | NC_007510 |
| Length | 3,694,126 |
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The map label for this gene is 78067676
Identifier: 78067676
GI number: 78067676
Start: 3359925
End: 3361352
Strand: Reverse
Name: 78067676
Synonym: Bcep18194_A6207
Alternate gene names: NA
Gene position: 3361352-3359925 (Counterclockwise)
Preceding gene: 78067677
Following gene: 78067675
Centisome position: 90.99
GC content: 50.84
Gene sequence:
>1428_bases ATGTTTAACGATATGTGGTTGGTTCGCGATCGCTGTCGGACCGGTCTGCGTTTCAATCCGATGATGCACGAGTCCTTCAT AAAATGGCGAAATGCGGGGGCTCCCTTATCGAGATGGGCACCACTCCAGGAAAAATTCTCGGTTCCACTAATTGAGGATG CCATAAACTGGGCCGACCAGATTGGTCCCATGCTTATTCCGATACTGGAGCAAATTTGGAAGGTACATCACGAGACCGCG TTCAAGTCGAGAACAGCTCTTCGAAGAGATACGGATCGTTTTCTCGCGGCGCTCGCCGAGACCCCCGAATTTCGTGAACT CTTAAGTGCGACAAGACTGCAGGGACGCCCCACCTATGAGGTGGTTCGTGAGGCACTGCGTTTGACGCTTGGCTCGATTG TTGTTCAGGTGTTATTCCTGTGCGGGCTCCGCGTAAGCGAGCTTGTTACCCTTAGACGTGGGTGTCTGACTGAACATACG CATTCTGGTGGGTATAAATATATATATATTGAAGGAACGGTTGCGAAATCAAATGGAAGAGGCCATAAATGGATAGCGCC GTCGCCGGTTTGCAGATCTTTGCAATTGGCAGAGAAAATATTCGCATTTCTTGGCGAGCAAAGAAATGCGTTGCTTTTAT CGCCGGGCGGTAACGGATCCTTGCCGCGTCGAGCACAGTCGTTCCGTCGTATGAGCGAAGCCCATGCGGCGATTCTTTTA CGCAATTTTGCTCGATCCTCATGGCGTGAGCATCCTCTTCCTACAGGGGCGCGACTACATCCCCATCAGGGAAGAAAGAC ATTCGCACGGTTTGCGGTTACCCGCGACAAGCGAGCGTTGGAGGCGCTGGCGCAACACTATGGACATGTCCATAGCGGAA TTACCGACAAGTTTTACGTTGGGGTAGACATTGAACTTGATGAACTCCTTGATCGTGCAAATCAAGAGGATCTTGCGCTA CATTTGATGGACCTGATTGCAGCCGATATAGTGGGTGGTAAGGCGGGGGCGTCACTTATGTCCTTGAAATCTAAGTATTA TGAGAATCATTCATTTCGCGGTAAGCGGTCACTAGCCTCGTTGGTCGAAAAGATGATTGGCGAAGGTATAAAATTGGCTC CATGTCATTGGGGATACTGTGTGTACGTCGAGCAACTCTCTGCGTGCCACGGGGATGAGTCGGGGCCAAATGAGATTGAG CGCTCGCCAGATGTCTGTGCGCGATGCAGCAACTTCGCGGTAACTGAGGCTCATAGGCCATGGTGGGAAGCGCGATTTCG CGCGGACGAAGTATTTCTCCAAAAAAAATCTCTCCCGGATCAGACGAGACATTTCGTGGAGCAGAGATTGGCGCGCTCTA CCATGTTGCTTCGTCAGATTAACGCAAACAGTTTTGGAGTTGTCGATGATGGAGAGCAGCATGAGTAA
Upstream 100 bases:
>100_bases TTAGCGATCTGACTCCCGAGTCAGTGAACAATTTCATGCGGGGTGTGGTTGGGCGGCCGAGAGGTGTTCTCACAAAAAAA CCGTCCAGGCATGGTGTGCA
Downstream 100 bases:
>100_bases CGATGATATGCGCTTGCCTGCGATAACTCGTGCGGAGGTTGCATTGGAGTATCTTGTCGCGGAAGGGGATGCCTCGATAT CTCTATCACAGGTCTGTAAA
Product: Phage integrase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MFNDMWLVRDRCRTGLRFNPMMHESFIKWRNAGAPLSRWAPLQEKFSVPLIEDAINWADQIGPMLIPILEQIWKVHHETA FKSRTALRRDTDRFLAALAETPEFRELLSATRLQGRPTYEVVREALRLTLGSIVVQVLFLCGLRVSELVTLRRGCLTEHT HSGGYKYIYIEGTVAKSNGRGHKWIAPSPVCRSLQLAEKIFAFLGEQRNALLLSPGGNGSLPRRAQSFRRMSEAHAAILL RNFARSSWREHPLPTGARLHPHQGRKTFARFAVTRDKRALEALAQHYGHVHSGITDKFYVGVDIELDELLDRANQEDLAL HLMDLIAADIVGGKAGASLMSLKSKYYENHSFRGKRSLASLVEKMIGEGIKLAPCHWGYCVYVEQLSACHGDESGPNEIE RSPDVCARCSNFAVTEAHRPWWEARFRADEVFLQKKSLPDQTRHFVEQRLARSTMLLRQINANSFGVVDDGEQHE
Sequences:
>Translated_475_residues MFNDMWLVRDRCRTGLRFNPMMHESFIKWRNAGAPLSRWAPLQEKFSVPLIEDAINWADQIGPMLIPILEQIWKVHHETA FKSRTALRRDTDRFLAALAETPEFRELLSATRLQGRPTYEVVREALRLTLGSIVVQVLFLCGLRVSELVTLRRGCLTEHT HSGGYKYIYIEGTVAKSNGRGHKWIAPSPVCRSLQLAEKIFAFLGEQRNALLLSPGGNGSLPRRAQSFRRMSEAHAAILL RNFARSSWREHPLPTGARLHPHQGRKTFARFAVTRDKRALEALAQHYGHVHSGITDKFYVGVDIELDELLDRANQEDLAL HLMDLIAADIVGGKAGASLMSLKSKYYENHSFRGKRSLASLVEKMIGEGIKLAPCHWGYCVYVEQLSACHGDESGPNEIE RSPDVCARCSNFAVTEAHRPWWEARFRADEVFLQKKSLPDQTRHFVEQRLARSTMLLRQINANSFGVVDDGEQHE >Mature_475_residues MFNDMWLVRDRCRTGLRFNPMMHESFIKWRNAGAPLSRWAPLQEKFSVPLIEDAINWADQIGPMLIPILEQIWKVHHETA FKSRTALRRDTDRFLAALAETPEFRELLSATRLQGRPTYEVVREALRLTLGSIVVQVLFLCGLRVSELVTLRRGCLTEHT HSGGYKYIYIEGTVAKSNGRGHKWIAPSPVCRSLQLAEKIFAFLGEQRNALLLSPGGNGSLPRRAQSFRRMSEAHAAILL RNFARSSWREHPLPTGARLHPHQGRKTFARFAVTRDKRALEALAQHYGHVHSGITDKFYVGVDIELDELLDRANQEDLAL HLMDLIAADIVGGKAGASLMSLKSKYYENHSFRGKRSLASLVEKMIGEGIKLAPCHWGYCVYVEQLSACHGDESGPNEIE RSPDVCARCSNFAVTEAHRPWWEARFRADEVFLQKKSLPDQTRHFVEQRLARSTMLLRQINANSFGVVDDGEQHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53985; Mature: 53985
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNDMWLVRDRCRTGLRFNPMMHESFIKWRNAGAPLSRWAPLQEKFSVPLIEDAINWADQ CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHCCCCHHHHHHHHHHH IGPMLIPILEQIWKVHHETAFKSRTALRRDTDRFLAALAETPEFRELLSATRLQGRPTYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHH VVREALRLTLGSIVVQVLFLCGLRVSELVTLRRGCLTEHTHSGGYKYIYIEGTVAKSNGR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCC GHKWIAPSPVCRSLQLAEKIFAFLGEQRNALLLSPGGNGSLPRRAQSFRRMSEAHAAILL CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH RNFARSSWREHPLPTGARLHPHQGRKTFARFAVTRDKRALEALAQHYGHVHSGITDKFYV HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE GVDIELDELLDRANQEDLALHLMDLIAADIVGGKAGASLMSLKSKYYENHSFRGKRSLAS EECCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH LVEKMIGEGIKLAPCHWGYCVYVEQLSACHGDESGPNEIERSPDVCARCSNFAVTEAHRP HHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHCCCEEECCCCC WWEARFRADEVFLQKKSLPDQTRHFVEQRLARSTMLLRQINANSFGVVDDGEQHE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MFNDMWLVRDRCRTGLRFNPMMHESFIKWRNAGAPLSRWAPLQEKFSVPLIEDAINWADQ CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHCCCHHHHCCCCHHHHHHHHHHH IGPMLIPILEQIWKVHHETAFKSRTALRRDTDRFLAALAETPEFRELLSATRLQGRPTYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHH VVREALRLTLGSIVVQVLFLCGLRVSELVTLRRGCLTEHTHSGGYKYIYIEGTVAKSNGR HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCC GHKWIAPSPVCRSLQLAEKIFAFLGEQRNALLLSPGGNGSLPRRAQSFRRMSEAHAAILL CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH RNFARSSWREHPLPTGARLHPHQGRKTFARFAVTRDKRALEALAQHYGHVHSGITDKFYV HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE GVDIELDELLDRANQEDLALHLMDLIAADIVGGKAGASLMSLKSKYYENHSFRGKRSLAS EECCCHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH LVEKMIGEGIKLAPCHWGYCVYVEQLSACHGDESGPNEIERSPDVCARCSNFAVTEAHRP HHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHCCCEEECCCCC WWEARFRADEVFLQKKSLPDQTRHFVEQRLARSTMLLRQINANSFGVVDDGEQHE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA